FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14212 contig Ccv1_Contig14212:1..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.317e-82
Identity = 151/180 (83.89%), Postives = 164/180 (91.11%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A+GIDLGTTYSCVGV+ + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F DP+VQSDM+HWPFKV+S  G KP + V YKGE K F+PEEISSMVL KMKE AEA+LG  VK+AVVTVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAAIAYG
Sbjct:    6 AVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYG 185          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.317e-82
Identity = 152/180 (84.44%), Postives = 163/180 (90.56%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSDM+HWPFKV +   DKP+I V Y+GEEK F+PE+ISSMVL KMKE AEAYLG  VK AVVTVPAYFNDSQRQATKDAG I+GL V+RIINEPTAAAIAYG
Sbjct:    6 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEKISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTISGLEVLRIINEPTAAAIAYG 185          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.317e-82
Identity = 151/180 (83.89%), Postives = 164/180 (91.11%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+ + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDA RLIGR+F D SVQSDM+HWPFKVV+  G KP + V YKGE K F+PEEISSMVL KMKE AEA+LGHAVK+AV+TVPAYFNDSQRQATKD+GAIAGLNV+RIINEPTAAAIAYG
Sbjct:    5 AIGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDANRLIGRKFDDGSVQSDMKHWPFKVVNAGGGKPKVQVEYKGETKTFTPEEISSMVLVKMKETAEAFLGHAVKDAVITVPAYFNDSQRQATKDSGAIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.317e-82
Identity = 153/186 (82.26%), Postives = 169/186 (90.86%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A  +G AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGR+F+DP VQSDM+ WPF+V++  G KP ++V+YKGE K F PEEISSMVLTKMKE AEA+LGH V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 AAAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVIN-EGGKPKVLVSYKGENKAFYPEEISSMVLTKMKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.246e-82
Identity = 151/180 (83.89%), Postives = 163/180 (90.56%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGVWQN+R++IIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSDM+HWPFKV +   DKP+I V Y+GEEK F+PEEISSMVL KMKE AEAYLG  VK AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAIAYG
Sbjct:    6 AIGIDLGTTYSCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVVRIINEPTAAAIAYG 185          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.246e-82
Identity = 152/186 (81.72%), Postives = 170/186 (91.40%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A  +G AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGR+F+DP VQSDM+ WPF+V++  G KP ++V+YKGE+K F PEEISSMVLTKMKE AEA+LG+ V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 AAAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVIN-EGGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.246e-82
Identity = 152/186 (81.72%), Postives = 170/186 (91.40%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A  +G AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGR+F+DP VQSDM+ WPF+V++  G KP ++V+YKGE+K F PEEISSMVLTKMKE AEA+LG+ V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 AAAKGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVIN-EGGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 3.832e-82
Identity = 151/180 (83.89%), Postives = 163/180 (90.56%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGVWQN+RVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+FSD  VQSDM+HWPFKVV+   DKP+I V ++GE K F+PEEISSMVL KMKE+AE+YLG  V  AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAIAYG
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFRGETKTFNPEEISSMVLLKMKEVAESYLGKQVAKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYG 185          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 304.294 bits (778), Expect = 3.832e-82
Identity = 152/181 (83.98%), Postives = 163/181 (90.06%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            KAIGIDLGTTYSCV VWQNDRVE+IANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F D  VQSDM+HWPF+V S  G KP I + YKGE+K F+PEEISSMVL KM+E AEAYLG  VK+AVVTVPAYFNDSQRQATKDAG I+GLNVMRIINEPTAAAIAYG
Sbjct:    3 KAIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDAEVQSDMKHWPFEVTS-VGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNVMRIINEPTAAAIAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.832e-82
Identity = 151/180 (83.89%), Postives = 164/180 (91.11%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPS VAFTDTERLIGDAAKNQVA+NPQNTVFDAKRLIGR+F DP VQ DM+HWPF+V++  GDKP + V+YKGE K F PEEISSMVLTKMKEIAE YLGH V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSSVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQGDMKHWPFRVIN-DGDKPKVQVSYKGETKGFYPEEISSMVLTKMKEIAEGYLGHPVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 184          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7A_CAEEL1.317e-8283.89Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_LEIAM1.317e-8284.44Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_BRUMA1.317e-8283.89Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HS71L_MACFA1.317e-8282.26Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP70_LEIMA2.246e-8283.89Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HS71L_PIG2.246e-8281.72Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN2.246e-8281.72Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP74_TRYBB3.832e-8283.89Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP72_USTMA3.832e-8283.98Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HS71A_PIG3.832e-8283.89Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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