FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14212 contig Ccv1_Contig14212:1..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.004e-82
Identity = 153/180 (85.00%), Postives = 162/180 (90.00%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            +IGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGRRF +P VQ+DM+HWPFKVVS  G KP I V YKGE K F PEEISSMVL KMKEIAEAYLGH V NAV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAAIAYG
Sbjct:    8 SIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPSNTVFDAKRLIGRRFDEPVVQADMKHWPFKVVS-EGGKPKIQVDYKGENKTFFPEEISSMVLVKMKEIAEAYLGHKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVQRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.004e-82
Identity = 151/188 (80.32%), Postives = 166/188 (88.30%), Query Frame = 3
Query:  114 MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            MA    G ++GIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN  NTVFDAK LIGR+FSDP VQ+D++HWPFK+ SG   +  IVV +KGE K F PEEISSMVL KM+E+AEA++G  VKNAV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAAIAYG
Sbjct:    1 MAQSVSGYSVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNAHNTVFDAKPLIGRKFSDPIVQADIKHWPFKLTSG-WRQAQIVVQFKGESKTFQPEEISSMVLIKMREVAEAFIGKEVKNAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYG 187          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 6.536e-82
Identity = 151/186 (81.18%), Postives = 169/186 (90.86%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A  +G AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGR+F+DP VQ+DM+ WPF+V++  G KP ++V+YKGE K F PEEISSMVLTK+KE AEA+LGH V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 ATAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVIN-EGGKPKVLVSYKGENKAFYPEEISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 8.536e-82
Identity = 151/180 (83.89%), Postives = 165/180 (91.67%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F DP +Q+DM+HWPF VV+  G KP I V +KGE K F+PEEISSMVLTKMKE AEAYLG +VKNAV+TVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAA+AYG
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVN-DGGKPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.115e-81
Identity = 151/186 (81.18%), Postives = 166/186 (89.25%), Query Frame = 3
Query:  120 AKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            +  +G +IGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ+DM+HWPFKVVS  G KP + V YKGE K F+PEEISSMVL KM+EIAEAYLG  V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SSAKGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKVVS-DGGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.115e-81
Identity = 151/183 (82.51%), Postives = 165/183 (90.16%), Query Frame = 3
Query:  129 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            +G AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR++ DP+VQSDM+HWPF+VV+  G KP + V YKGE K F PEEISSMVLTKMKEIAEAYLG  V+ AV+TVPAYFNDSQRQATKDAG I GLNVMRIINEPTAAAIAYG
Sbjct:    4 KGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVVN-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAYFNDSQRQATKDAGTITGLNVMRIINEPTAAAIAYG 185          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.456e-81
Identity = 151/180 (83.89%), Postives = 165/180 (91.67%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F DP +Q+DM+HWPF VV+  G KP I V +KGE K F+PEEISSMVLTKMKE AEAYLG +VKNAV+TVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAA+AYG
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDCG-KPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.456e-81
Identity = 151/180 (83.89%), Postives = 165/180 (91.67%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F DP +Q+DM+HWPF VV+  G KP I V +KGE K F+PEEISSMVLTKMKE AEAYLG +VKNAV+TVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAA+AYG
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDCG-KPKIRVEFKGERKTFAPEEISSMVLTKMKETAEAYLGQSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ORYLA5.004e-8285.00Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_BRELC5.004e-8280.32Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HS71L_HUMAN6.536e-8281.18Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP74_ANOAL8.536e-8283.89Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_ONCTS1.115e-8181.18Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_CHICK1.115e-8182.51Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP72_ANOAL1.456e-8183.89Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL1.456e-8183.89Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP7C_SAGOE2.484e-8182.61Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT2.484e-8182.61Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
back to top