FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_SALG2 (Chaperone protein dnaK OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV +    +  ++ N +G+RTTPS +A+T D E L+G  AK Q   NPQNT+F  KRLIGRRF D  VQ D+   P+K++        + V  KG+  + +P +IS+ VL KMK+ AE YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_SALEP (Chaperone protein dnaK OS=Salmonella enteritidis PT4 (strain P125109) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV +    +  ++ N +G+RTTPS +A+T D E L+G  AK Q   NPQNT+F  KRLIGRRF D  VQ D+   P+K++        + V  KG+  + +P +IS+ VL KMK+ AE YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_SALDC (Chaperone protein dnaK OS=Salmonella dublin (strain CT_02021853) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV +    +  ++ N +G+RTTPS +A+T D E L+G  AK Q   NPQNT+F  KRLIGRRF D  VQ D+   P+K++        + V  KG+  + +P +IS+ VL KMK+ AE YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_SALCH (Chaperone protein dnaK OS=Salmonella choleraesuis GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV +    +  ++ N +G+RTTPS +A+T D E L+G  AK Q   NPQNT+F  KRLIGRRF D  VQ D+   P+K++        + V  KG+  + +P +IS+ VL KMK+ AE YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_SALA4 (Chaperone protein dnaK OS=Salmonella agona (strain SL483) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 103/183 (56.28%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV +    +  ++ N +G+RTTPS +A+T D E L+G  AK Q   NPQNT+F  KRLIGRRF D  VQ D+   P+K++        + V  KG+  + +P +IS+ VL KMK+ AE YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAIMDGTQARVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPYKIIGADNGDAWLDV--KGQ--KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 105/183 (57.38%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV V    +  +I N +G+RTTPS VAFTD  E L+G  AK Q   NP  T+F  KRLIGRRF D  VQ D+   P+K+V        + +   G++K  +P +IS+ VL KMK+ AE +LG  V +AV+TVPAYFND+QRQATKDAG IAGLNV RIINEPTAAA+AYG
Sbjct:    2 GKTIGIDLGTTNSCVAVLDGGKARVIENGEGDRTTPSVVAFTDDGEILVGSPAKRQAVTNPNKTLFAIKRLIGRRFQDEEVQRDIGIMPYKIVKADNGDAWVEID--GDKK--APPQISAEVLKKMKKTAEEFLGEKVTDAVITVPAYFNDAQRQATKDAGKIAGLNVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 102/183 (55.74%), Postives = 130/183 (71.04%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV + +    +++ N++G RTTPS VA+T D +RL+G  AK Q   NP+NT++ AKR IGRRF +  +Q +++  P+ VV+   D       +K + K  SPEEI + VL K+K++AE YLG  V  AVVTVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAIMEGGEPKVLVNEEGARTTPSVVAYTKDGDRLVGQIAKRQAVTNPENTIYSAKRFIGRRFEE--IQEEIKLVPYTVVAKGND-----CAFKVQGKTASPEEIGAAVLAKLKKVAEDYLGEPVTEAVVTVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYG 177          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK2_VIBF1 (Chaperone protein dnaK 2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.274e-49
Identity = 105/182 (57.69%), Postives = 125/182 (68.68%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV V   D   ++ N +G RTT S +A+TD E L+G  AK Q   NPQNT+F  KRLIGRRF D  VQ D+   PFK+V    D     V  KG+  + +  ++S+ VL KMK+ AE +LG  V  AVVTVPAYFND+QRQATKDAG IAGL+V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAVLDGDTPRVLENAEGERTTASVIAYTDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIEIMPFKIVK--ADNGDAWVEAKGQ--KMAAPQVSAEVLKKMKKTAEDFLGEEVTGAVVTVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAYG 179          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_SHEDO (Chaperone protein dnaK OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49
Identity = 102/182 (56.04%), Postives = 124/182 (68.13%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV V    +  ++ N +G+RTTPS VA+TD E ++G  AK Q   NP NT F  KRLIGRRF D  VQ D+   PFK++    D     V  +G   + +P ++S+ +L KMK+ AE +LG  V  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIVAYTDEEIIVGQPAKRQAVTNPNNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIG--ADNGDAWVEQRG--NKMAPPQVSAEILKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYG 179          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_PSYIN (Chaperone protein dnaK OS=Psychromonas ingrahamii (strain 37) GN=dnaK PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.276e-49
Identity = 102/182 (56.04%), Postives = 123/182 (67.58%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV V      +II N +G RTTPS +A+T+ E L+G  AK Q   NPQNT+F  KRLIGRR+ D  VQ D++  P+K+V        +    +    + +P +IS+ VL KMK+ AE YLG  V  AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA AYG
Sbjct:    2 GKIIGIDLGTTNSCVSVLVGGVAKIIENAEGERTTPSIIAYTEGETLVGQPAKRQSVTNPQNTLFAIKRLIGRRYEDEEVQRDIKIMPYKIVKADNGDAWV----EAHGNKMAPPQISAEVLKKMKKTAEDYLGEKVTGAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAAFAYG 179          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_SALG23.274e-4956.28Chaperone protein dnaK OS=Salmonella gallinarum (s... [more]
DNAK_SALEP3.274e-4956.28Chaperone protein dnaK OS=Salmonella enteritidis P... [more]
DNAK_SALDC3.274e-4956.28Chaperone protein dnaK OS=Salmonella dublin (strai... [more]
DNAK_SALCH3.274e-4956.28Chaperone protein dnaK OS=Salmonella choleraesuis ... [more]
DNAK_SALA43.274e-4956.28Chaperone protein dnaK OS=Salmonella agona (strain... [more]
DNAK_IDILO3.274e-4957.38Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]
DNAK_BDEBA3.274e-4955.74Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
DNAK2_VIBF13.274e-4957.69Chaperone protein dnaK 2 OS=Vibrio fischeri (strai... [more]
DNAK_SHEDO4.276e-4956.04Chaperone protein dnaK OS=Shewanella denitrificans... [more]
DNAK_PSYIN4.276e-4956.04Chaperone protein dnaK OS=Psychromonas ingrahamii ... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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