FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_PSE14 (Chaperone protein dnaK OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 99/182 (54.40%), Postives = 128/182 (70.33%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            + IGIDLGTT SCV + +N  V++I N +G RTTPS +A+  D E L+G +AK Q   NP NT++  KRLIGR+F +  VQ D++  P+K+V        + V      ++ +P +IS+ +L KMK+ AE YLG AV  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+AYG
Sbjct:    3 RIIGIDLGTTNSCVSILENGNVKVIENAEGTRTTPSIIAYANDGEILVGQSAKRQAVTNPHNTLYAVKRLIGRKFEEDVVQKDIQMVPYKIVKADNGDAWVEVN----GQKMAPPQISAEILKKMKKTAEDYLGEAVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMF (Chaperone protein dnaK OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K IGIDLGTT SC+ + +N + ++I N +G RTTPS +A+ D  E L+G  AK Q   N +NT++ AKRLIG +F D  VQ D+   PF+++        +    K + K  SP +IS+ VL KMKE AEAYLG  V  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+A+G
Sbjct:    3 KVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWV----KAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMB (Chaperone protein dnaK OS=Neisseria meningitidis serogroup B GN=dnaK PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K IGIDLGTT SC+ + +N + ++I N +G RTTPS +A+ D  E L+G  AK Q   N +NT++ AKRLIG +F D  VQ D+   PF+++        +    K + K  SP +IS+ VL KMKE AEAYLG  V  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+A+G
Sbjct:    3 KVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWV----KAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMA (Chaperone protein dnaK OS=Neisseria meningitidis serogroup A GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K IGIDLGTT SC+ + +N + ++I N +G RTTPS +A+ D  E L+G  AK Q   N +NT++ AKRLIG +F D  VQ D+   PF+++        +    K + K  SP +IS+ VL KMKE AEAYLG  V  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+A+G
Sbjct:    3 KVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWV----KAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_NEIM0 (Chaperone protein dnaK OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.772e-48
Identity = 100/182 (54.95%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K IGIDLGTT SC+ + +N + ++I N +G RTTPS +A+ D  E L+G  AK Q   N +NT++ AKRLIG +F D  VQ D+   PF+++        +    K + K  SP +IS+ VL KMKE AEAYLG  V  AV+TVPAYFNDSQRQATKDAG IAGL+V RIINEPTAAA+A+G
Sbjct:    3 KVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLDGGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAWV----KAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_VESOH (Chaperone protein dnaK OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.620e-48
Identity = 102/183 (55.74%), Postives = 126/183 (68.85%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K IGIDLGTT SCV +     V+II N +G+RTTPS +A+     E L+G AAK Q   NP+NT++  KRLIGRRF + +VQ D+   P+K+V        + V    + K+ +  EIS+ V+ KMK+ AE YLG  V  AV+TVPAYFNDSQRQATKDAG IAGLNV RIINEPTAAA+AYG
Sbjct:    3 KIIGIDLGTTNSCVAIMDGGSVKIIENSEGDRTTPSIIAYPKDSEEVLVGQAAKRQAVTNPENTLYAIKRLIGRRFEEDAVQKDIDLVPYKIVKADNGDAWVKV----KNKKMAAPEISAKVIGKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYG 181          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_CYTH3 (Chaperone protein dnaK OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.620e-48
Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV V +     +I N +G RTTPS VAF +  ER +GD AK Q   NP NT+   KR +G++FS+   ++D     +K+ +G  D P + +     +++++P+E+S+M+L KMK  AE YLGH VK AV+TVPAYFND++RQATK+AG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGSEAVVIPNSEGKRTTPSIVAFLENGERKVGDPAKRQAITNPTNTISSIKRFMGKKFSESKSEADRA--TYKLEAGSNDTPRVRIA----DRQYTPQELSAMILQKMKTTAEEYLGHEVKEAVITVPAYFNDAERQATKEAGQIAGLEVKRIINEPTAAALAYG 178          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK2_COLP3 (Chaperone protein dnaK 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.620e-48
Identity = 103/183 (56.28%), Postives = 125/183 (68.31%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            GK IGIDLGTT SCV V   D V +I N +G+RTTPS + +T + E L+G  AK Q   NP+NT++  KRLIGRRF D   Q D+   PF +V        + V  KGE  + +P ++S+ VL KMK+ AE +LG  V  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+AYG
Sbjct:    2 GKIIGIDLGTTNSCVAVLDGDSVRVIENAEGDRTTPSIIGYTAEGETLVGQPAKRQSVTNPENTLYAIKRLIGRRFEDKETQRDIDIMPFGIVKADNGDAWVQV--KGE--KIAPPQVSAEVLKKMKKTAEDFLGETVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_NITEU (Chaperone protein dnaK OS=Nitrosomonas europaea GN=dnaK PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.728e-48
Identity = 101/182 (55.49%), Postives = 127/182 (69.78%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K IGIDLGTT SCV V + ++ ++I N +G RTTPS VA+  D E L+G +AK Q   NP+NT+F  KRLIGRRF +  VQ D+   P+K+V    +   I    +   ++ +P E+S+ VL KMK+ AE YLG  V  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+G
Sbjct:    3 KIIGIDLGTTNSCVAVMEGNKPKVIENAEGARTTPSIVAYAEDNEILVGASAKRQAVTNPENTLFAIKRLIGRRFDEEVVQKDISVTPYKIVRADNNDAWI----EARGRKIAPPEVSAQVLIKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFG 180          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: DNAK_THIDA (Chaperone protein dnaK OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaK PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.174e-48
Identity = 100/183 (54.64%), Postives = 126/183 (68.85%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            G+ IGIDLGTT SCV V +N   ++I N +G RTTPS VA+  D E L+G  AK Q   NP+NT+F  KRLIGRRF +  VQ D+   P+K+V        + V     +K+ + +++S+ +L KMK+ AE YLG  V  AV+TVPAYFNDSQRQATKDAG IAGL V RIINEPTAAA+A+G
Sbjct:    2 GRIIGIDLGTTNSCVAVMENGSPKVIENAEGARTTPSIVAYAEDGEILVGAPAKRQAVTNPKNTIFAVKRLIGRRFEEKEVQKDIGLMPYKIVKADNGDAWVEV----RDKKMAAQQVSAEILRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFG 180          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PSE142.772e-4854.40Chaperone protein dnaK OS=Pseudomonas syringae pv.... [more]
DNAK_NEIMF2.772e-4854.95Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_NEIMB2.772e-4854.95Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_NEIMA2.772e-4854.95Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_NEIM02.772e-4854.95Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_VESOH3.620e-4855.74Chaperone protein dnaK OS=Vesicomyosocius okutanii... [more]
DNAK_CYTH33.620e-4853.01Chaperone protein dnaK OS=Cytophaga hutchinsonii (... [more]
DNAK2_COLP33.620e-4856.28Chaperone protein dnaK 2 OS=Colwellia psychrerythr... [more]
DNAK_NITEU4.728e-4855.49Chaperone protein dnaK OS=Nitrosomonas europaea GN... [more]
DNAK_THIDA6.174e-4854.64Chaperone protein dnaK OS=Thiobacillus denitrifica... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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