FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGEAKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 2.484e-81
Identity = 152/184 (82.61%), Postives = 164/184 (89.13%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEE+SSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAG-RPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.244e-81
Identity = 150/181 (82.87%), Postives = 164/181 (90.61%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGD+AKNQVAMNP NTVFDAKRLIGR+F+D  VQSD++H+PF V    G KP I V Y+GE+K FSPEEISSM+LTKMKE+AE+YLG  V +AVVTVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAAIAYG
Sbjct:    3 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQVAMNPHNTVFDAKRLIGRKFADAEVQSDIKHFPFTVFD-KGGKPYIRVQYRGEDKEFSPEEISSMILTKMKEVAESYLGGTVTSAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 4.236e-81
Identity = 149/180 (82.78%), Postives = 167/180 (92.78%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVG++++DR+EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP VQSDM+H+PFKV+   G KP+I V +KGEEK+F+PEEISSMVLTKM+E AE+YLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    4 AIGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFADPEVQSDMKHFPFKVIDKAG-KPVISVEFKGEEKQFTPEEISSMVLTKMRETAESYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.236e-81
Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGVWQN+RV+IIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQSDM+HWPFKV +   DKPMI V Y+GEEK F+PEEISSMVL KMKE AEAYLG  VK AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPT  AIAYG
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPT-RAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.533e-81
Identity = 152/184 (82.61%), Postives = 163/184 (88.59%), Query Frame = 3
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQSDM+HWPF VV+  G +P + V YKGE K F PEEISSMVLTKMKEIAEAYLG  V NAVVTVPAYFNDSQRQ TKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAG-RPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQGTKDAGTIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 5.533e-81
Identity = 151/182 (82.97%), Postives = 164/182 (90.11%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            G AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F D +VQSDM+HWPF+VVS  G KP + V YKGE K F PEEISSMVLTKMKEIAEAYLG  V++AV+TVPAYFNDSQRQATKDAG I GLNV+RIINEPTAAAIAYG
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYG 185          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_MOUSE2.484e-8182.61Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN2.484e-8182.61Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE2.484e-8182.61Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR2.484e-8182.61Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN2.484e-8182.61Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP71_PUCGR3.244e-8182.87Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP72_PARBA4.236e-8182.78Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP70_LEIDO4.236e-8183.89Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP7C_CHICK5.533e-8182.61Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP72_RAT5.533e-8182.97Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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