FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14212 contig Ccv1_Contig14212:1..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP+NTVFDAKRLIGR++ DP +  DM+HWPFKVVS  G KP I V YKGE KRF+PEEISSMVLTKMKE AEAYLG ++ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVS-DGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYG 181
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP+NTVFDAKRLIGR++ DP +  DM+HWPFKVVS  G KP I V YKGE KRF+PEEISSMVLTKMKE AEAYLG ++ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVS-DGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYG 181
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP+NTVFDAKRLIGR++ DP +  DM+HWPFKVVS  G KP I V YKGE KRF+PEEISSMVLTKMKE AEAYLG ++ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVS-DGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYG 181
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP+NTVFDAKRLIGR++ DP +  DM+HWPFKVVS  G KP I V YKGE KRF+PEEISSMVLTKMKE AEAYLG ++ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVS-DGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYG 181
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP+NTVFDAKRLIGR++ DP +  DM+HWPFKVVS  G KP I V YKGE KRF+PEEISSMVLTKMKE AEAYLG ++ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVS-DGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYG 181
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 147/180 (81.67%), Postives = 163/180 (90.56%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP+NTVFDAKRLIGR++ DP +  DM+HWPFKVVS  G KP I V YKGE KRF+PEEISSMVLTKMKE AEAYLG ++ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDPKIAEDMKHWPFKVVS-DGGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYG 181
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 4.684e-80
Identity = 147/180 (81.67%), Postives = 164/180 (91.11%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A+GIDLGTTYSCVGV+++DR++IIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D  VQ+DM+HWPFKVV   G KP+I V +KGE K+F+PEEISSMVLTKM+E AEA+LG  V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    4 AVGIDLGTTYSCVGVFRDDRIDIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFGDAEVQADMKHWPFKVVDKSG-KPIIEVEFKGETKQFTPEEISSMVLTKMRETAEAFLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG 182
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.117e-80
Identity = 146/184 (79.35%), Postives = 164/184 (89.13%), Query Frame = 3 
Query:  126 TEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            ++G A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NT+FDAKRLIGRRF D  VQ+DM+HWPFKV+S  G +P + V YKGE K F PEEISSMVL KMKEIAEAYLG ++ NAV+TVPAYFNDSQRQ TKDAG I+GLNV+RIINEPTAAAIAYG
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFEDSVVQADMKHWPFKVIS-DGGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAYG 184
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.117e-80
Identity = 149/181 (82.32%), Postives = 163/181 (90.06%), Query Frame = 3 
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            K+IGIDLGTTYSCVG + N+RVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGRRF+DP VQSDM+HWPFKV+   G KP+I V +KGE K F+PEEISSMVL KM+E AEA+LG  V +AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    3 KSIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDG-KPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG 182
[Close]
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 6.117e-80
Identity = 150/180 (83.33%), Postives = 162/180 (90.00%), Query Frame = 3 
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGRRF DPSVQSDM+HWPF+V    G K  I V YKGE+K FS EEISSMVLTKMKE+AE+YLG  V +AV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAAIAYG
Sbjct:    4 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDGAKNQVAMNPTNTVFDAKRLIGRRFDDPSVQSDMKHWPFEVTQ-VGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTVSDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYG 182
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_DROME3.586e-8081.67Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME3.586e-8081.67Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME3.586e-8081.67Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME3.586e-8081.67Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP71_DROME3.586e-8081.67Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME3.586e-8081.67Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP70_EMENI4.684e-8081.67Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP7C_ICTPU6.117e-8079.35Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP71_SCHPO6.117e-8082.32Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_SCHMA6.117e-8083.33Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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