FC920905

Overview
NameFC920905
Unique NameFC920905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.154e-78
Identity = 147/180 (81.67%), Postives = 162/180 (90.00%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A+GIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFT++ERLIGDAAKNQVAMNP NT+FDAKRLIGRRF D +VQSDM+HWPF+V +  G KP I V YKGE K F PEE+SSMVLTKM+E AEAYLG  V +AVVTVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAAIAYG
Sbjct:    6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDDATVQSDMKHWPFEVFAENG-KPRIRVEYKGERKSFYPEEVSSMVLTKMRETAEAYLGGTVTDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.154e-78
Identity = 143/182 (78.57%), Postives = 162/182 (89.01%), Query Frame = 3
Query:  132 GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            G AIGIDLGTTYSCVGV+QN +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NT+FDAKRLIGRRF+D S+Q+DM+HWPF+V++  G KPM+   Y GE K  SPEE+SSMVLTKMKE AEAYLG  V +AV+TVPAYFND+QRQATKDAG IAG+NV+RIINEPT AA+AYG
Sbjct:    4 GPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFNDSSIQADMKHWPFRVINKDG-KPMLQAEYMGETKTLSPEEVSSMVLTKMKETAEAYLGKKVTSAVITVPAYFNDAQRQATKDAGVIAGINVLRIINEPTRAALAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.154e-78
Identity = 144/180 (80.00%), Postives = 164/180 (91.11%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A+GIDLGTTYSCVG++++DR+EIIANDQGNRTTPS+VAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D  VQ+DM+H+PFKVV   G KP++ V +KGEEK+F+PEEISSMVLTKM+E AEAYLG  V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTA  IAYG
Sbjct:    4 AVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFNDAEVQADMKHFPFKVVEKSG-KPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAGGIAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 292.738 bits (748), Expect = 1.154e-78
Identity = 146/180 (81.11%), Postives = 162/180 (90.00%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A+GIDLGTTYSCVGV++ DR EIIANDQGNRTTPS+VAFTDTERL+GDAAKNQVAMNP NTVFDAKRLIGR+FSDP VQ+DM+H+PFKV+   G KP+I V +KGE K F+PEEIS+M+L KMKE AEAYLG  V NAVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    4 AVGIDLGTTYSCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAKRLIGRKFSDPEVQADMKHFPFKVID-RGGKPVIQVEFKGETKVFTPEEISAMILQKMKETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYG 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.507e-78
Identity = 145/180 (80.56%), Postives = 161/180 (89.44%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGVWQN +VEIIANDQGNRTTPSYVAF +TERLIGD AKNQVAMN +NTVFDAKRLIGR+F D  +Q D++ WPFKV++  G KP I V +KGE KRF+PEEISSMVLTKM+EIAE YLG  VK+AVVTVPAYFNDSQRQATKDAG+IAGLNV+RIINEPTAAA+AYG
Sbjct:    6 AIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKG-KPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYG 184          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.507e-78
Identity = 148/179 (82.68%), Postives = 162/179 (90.50%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAY 674
            AIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NPQNTVFDAKRLIGR+F DP VQSDM+HWPF+V++  GDKP + V+YKGE K F PEEISSMVLTKMKEIAEA LG+ V NAV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPT   IAY
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVIN-DGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEADLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPT-RTIAY 182          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.507e-78
Identity = 146/180 (81.11%), Postives = 162/180 (90.00%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            AIGIDLGTTYSCVGV+Q  +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP+N+VFDAKRLIGRRF D  +Q D++HWPFKV++  G KP I V +KG  K FSPEEISSMVLTKMKE AEAYLG  VK+AV+TVPAYFNDSQRQATKDAGAIAG+NV+RIINEPTAAA+AYG
Sbjct:    3 AIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNG-KPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYG 181          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.968e-78
Identity = 144/180 (80.00%), Postives = 165/180 (91.67%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            A+GIDLGTTYSCVGV+Q  RVEI+ANDQGNRTTPSYVAFTDTERL+GDAAK+Q A+NP NTVFDAKRLIGR+F+D +VQ+DM+HWPF+VVS  G KP + V+Y+GE+K F PEEISSMVL+KMKE AEAYLG  VK+AV+TVPAYFNDSQRQATKDAGAIAGLNV+RIINEPTAAAIA+G
Sbjct:    8 AVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPLNTVFDAKRLIGRKFADATVQADMKHWPFQVVS-EGCKPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAHG 186          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 2.570e-78
Identity = 150/185 (81.08%), Postives = 162/185 (87.57%), Query Frame = 3
Query:  129 EGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLG--HAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            E  AIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP++TVFDAKRLIGR+FSDP VQ+D++ WPF+V +G  D P IVV+YK EEK F  EEISSMVL KMKE A+A LG    VK AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPTAAAI+YG
Sbjct:    4 EAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEEISSMVLIKMKETAQASLGADREVKKAVVTVPAYFNDSQRQATKDAGMIAGLEVLRIINEPTAAAISYG 188          
BLAST of FC920905 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 290.041 bits (741), Expect = 7.478e-78
Identity = 145/181 (80.11%), Postives = 159/181 (87.85%), Query Frame = 3
Query:  135 KAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSPEEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYG 677
            KA+GIDLGTTYSCV  + NDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ AMNP NTVFDAKRLIGR+F DP V +D +H+PFKV+   G KP++ V YKGE K F+PEEISSM+LTKMKE AE +LG  VK+AVVTVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAAIAYG
Sbjct:    3 KAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQAAMNPHNTVFDAKRLIGRKFDDPEVTNDAKHYPFKVID-KGGKPVVQVEYKGETKTFTPEEISSMILTKMKETAENFLGTEVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 182          
The following BLAST results are available for this feature:
BLAST of FC920905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7A_DROME1.154e-7881.67Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP74_PARLI1.154e-7878.57Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP70_TRIRU1.154e-7880.00Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP70_NEUCR1.154e-7881.11Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP7B_DROME1.507e-7880.56Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP71_CERAE1.507e-7882.68Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP68_DROME1.507e-7881.11Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP76_SAGOE1.968e-7880.00Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP70_CHLRE2.570e-7881.08Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP74_YEAST7.478e-7880.11Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionC32014F04EF RVDevelop1 Citrus clementina cDNA clone C32014F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920905 ID=FC920905; Name=FC920905; organism=Citrus clementina; type=EST; length=678bp
GAGATCAAACAACGGCAAAGCACTCAAATTCACTACACAAATCACATTCT
TGAATTCTCCCTTTCATTCTGTAAAACTGTTAAACACTTTCTTGGTTCTT
GAATTTCTGCACAATGGCAGCAAAAACTGAAGGCAAGGCCATCGGCATAG
ACCTTGGAACGACTTACAGCTGCGTTGGAGTATGGCAAAACGATCGCGTA
GAGATCATAGCCAATGATCAAGGCAACAGAACCACTCCCTCCTATGTTGC
CTTTACTGACACGGAACGTCTCATCGGCGATGCGGCTAAAAACCAAGTCG
CCATGAACCCTCAGAACACTGTTTTCGACGCCAAACGACTCATCGGCAGG
CGATTCTCCGACCCGTCGGTTCAGAGCGACATGAGGCACTGGCCGTTTAA
GGTTGTTTCAGGGCCTGGCGACAAGCCTATGATTGTTGTTACTTACAAAG
GCGAAGAGAAACGGTTTTCACCTGAGGAAATCTCTTCTATGGTGTTGACT
AAGATGAAGGAGATTGCCGAGGCTTATCTTGGTCACGCTGTGAAGAACGC
TGTGGTCACTGTTCCTGCTTATTTTAATGACTCTCAAAGGCAGGCAACGA
AGGATGCTGGTGCTATTGCTGGGTTGAATGTCATGAGAATCATCAATGAG
CCTACCGCTGCTGCTATTGCTTATGGCT
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