FC920907

Overview
NameFC920907
Unique NameFC920907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7802 contig Ccv1_Contig7802:130..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.934e-42
Identity = 94/197 (47.72%), Postives = 122/197 (61.93%), Query Frame = 1
Query:  115 KLKRRLKETFFPDDPLRQFKGQP---LGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSKAF--LDHSFHK 690
            K K + KETFFPDDP +    +P   L  K +L  +Y  PI EW P Y  +  K D+++G+TI SLA+PQGISYAKLA++PPI+GLYSSFVPP VY V GSS +LAVG V+  SL++     +E+   + P              GL Q ++G LRLG ++DFLS +T+ GFM G AII+ LQ  K    L H  HK
Sbjct:   28 KFKSKCKETFFPDDPFKPISQEPNRLLKTKKLL--EYFVPIFEWLPKYDMQKLKYDVLAGITITSLAVPQGISYAKLASIPPIIGLYSSFVPPFVYAVFGSSNNLAVGTVAACSLLIAETFGEEMIKNE-PELYLHLIFTATLITGLFQFAMGFLRLGILVDFLSHSTITGFMGGTAIIILLQQLKGIFGLVHFTHK 221          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SUT22_ARATH (Sulfate transporter 2.2 OS=Arabidopsis thaliana GN=SULTR2;2 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.614e-39
Identity = 77/148 (52.03%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  220 FPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSK 663
            FPIL WG  Y   LFK D+++GLT+ASL IPQ I YA LA L P  GLY+S VPPL+Y+ +G+SR+LA+GPV++ SL++ SM+R    P  +P+             G  QA  GL RLGF++DFLS A L+GFMAGAAI++ LQ  K
Sbjct:   74 FPILSWGRQYKLNLFKKDLMAGLTLASLCIPQSIGYANLAGLDPEYGLYTSVVPPLIYSTMGTSRELAIGPVAVVSLLLSSMVRDLQDPVTDPIAYRKIVFTVTFFAGAFQAIFGLFRLGFLVDFLSHAALVGFMAGAAIVIGLQQLK 221          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SUT3_STYHA (Low affinity sulfate transporter 3 OS=Stylosanthes hamata GN=ST3 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37
Identity = 72/152 (47.37%), Postives = 104/152 (68.42%), Query Frame = 1
Query:  217 IFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSKAFL 672
            +FPIL W   YS   FK D++SGLT+ASL+IPQ I YA LA L P  GLY+S +PP++Y ++GSSR++A+GPV++ S+++ S++ + + P  +P              G+ Q + G+LRLGF++DFLS A L+GFMAGAAI++ LQ  K  L
Sbjct:   57 LFPILSWIRTYSATKFKDDLLSGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPVIYALMGSSREIAIGPVAVVSMLLSSLVPKVIDPDAHPNDYRNLVFTVTLFAGIFQTAFGVLRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLL 208          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: NO70_SOYBN (Early nodulin-70 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 71/194 (36.60%), Postives = 108/194 (55.67%), Query Frame = 1
Query:   91 PPHKSTIEKLKRRLKETFFPDDPLRQF---KGQPLGKKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSK 663
            P   S + ++   +KET  P      F   + QP  K+     Q +FPIL    NY+ +  K D+++GLT+A  AIPQ +  A LA L P  GLY+  VPPL+Y +L SSR++ +GP S+ SL++ SM++    P  +               G+ Q + GL R GF+++ LS+AT++GF+A AA+ + LQ  K
Sbjct:   10 PEPPSMLRQVVDNVKETLLPHPNPNTFSYLRNQPFSKRAFALLQNLFPILASLQNYNAQKLKCDLMAGLTLAIFAIPQCMGNATLARLSPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSLLLSSMIQTLKVPIHDSSTYIQLVFTVTFFAGIFQVAFGLFRFGFLVEHLSQATIVGFLAAAAVGIGLQQLK 203          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28
Identity = 65/167 (38.92%), Postives = 103/167 (61.68%), Query Frame = 1
Query:  217 IFPILEWGPNYSF-KLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSKAFLDHSFHKPMGLXPVM 714
            +FP   W   Y + + FK D+++G+T+  + +PQ +SYAKLA LPPI GLYSSFVP  VY + GSSR LA+GPV++ SL++ + L   ++ T N               G+++  +GLLRLG++I F+S + + GF + +AI++ L   K FL +S  +   + P++
Sbjct:   79 LFPCFRWIRTYRWSEYFKLDLMAGITVGIMLVPQAMSYAKLAGLPPIYGLYSSFVPVFVYAIFGSSRQLAIGPVALVSLLVSNAL-GGIADT-NEELHIELAILLALLVGILECIMGLLRLGWLIRFISHSVISGFTSASAIVIGLSQIKYFLGYSIARSSKIVPIV 243          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SUT42_ARATH (Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 68/174 (39.08%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  196 WILAAQYIFPILEWGPNYSF-KLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSKAFLDHSFHKPMGLXPVM 714
            WI A   IFP   W   Y + + FK D+++G+T+  + +PQ +SYA+LA L PI GLYSSFVP  VY V GSSR LAVGPV++ SL++ + L   V P++                G+ ++ +G LRLG++I F+S + + GF   +A+++ L   K FL +S  +   + PV+
Sbjct:   62 WIDA---IFPCFLWIRTYRWHQYFKLDLMAGITVGIMLVPQAMSYARLAGLQPIYGLYSSFVPVFVYAVFGSSRQLAVGPVALVSLLVSNALSGIVDPSEE--LYTELAILLALMVGIFESIMGFLRLGWLIRFISHSVISGFTTASAVVIGLSQLKYFLGYSVSRSSKIMPVI 230          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SULH2_SCHPO (Probable sulfate permease C869.05c OS=Schizosaccharomyces pombe GN=SPAC869.05c PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23
Identity = 55/150 (36.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  190 KKWILAAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAI 639
            K ++   + +FPI+EW PNY+     +D+I+G+T+  + +PQG+SYAK+A LP   GLYSSFV   +Y    +S+D+++GPV++ SLI   ++   V                    G +   +GLLRLGFII+F+    + GF  G+A+
Sbjct:   97 KNFLHYLKSLFPIIEWLPNYNPYWLINDLIAGITVGCVVVPQGMSYAKVATLPSEYGLYSSFVGVAIYCFFATSKDVSIGPVAVMSLITAKVI-ANVMAKDETYTAPQIATCLALLAGAITCGIGLLRLGFIIEFIPVPAVAGFTTGSAL 245          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: S2611_HUMAN (Sodium-independent sulfate anion transporter OS=Homo sapiens GN=SLC26A11 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23
Identity = 58/156 (37.18%), Postives = 88/156 (56.41%), Query Frame = 1
Query:  205 AAQYIFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAIIVSLQHSKAFL 672
            A Q   PIL W P+YS +  K D ++GL++   AIPQ ++YA++A LPP  GLYS+F+   VY  LG+SRD+ +GP +I SL++      E +                   G +Q ++G+LRLGF++DF+S   + GF + AA+ +     K  L
Sbjct:   29 ALQRRLPILAWLPSYSLQWLKMDFVAGLSVGLTAIPQALAYAEVAGLPPQYGLYSAFMGCFVYFFLGTSRDVTLGPTAIMSLLVSFYTFHEPA----------YAVLLAFLSGCIQLAMGVLRLGFLLDFISYPVIKGFTSAAAVTIGFGQIKNLL 174          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SULH1_SCHPO (Probable sulfate permease C3H7.02 OS=Schizosaccharomyces pombe GN=SPBC3H7.02 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23
Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  217 IFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQEVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAAI 639
            +FPI+ W P Y++     D I+G+T+  + +PQG+SYAK+A LP   GLYSSFV   +Y +  +S+D+++GPV++ SL+   ++    +   N               G +   LGLLRLGFII+F+    + GF  G+A+
Sbjct:  119 LFPIMNWLPRYNWNWLVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVAIYCIFATSKDVSIGPVAVMSLVTSKVIANVQAKDPN-YDAAQIGTTLALLAGAITCGLGLLRLGFIIEFIPVPAVAGFTTGSAL 258          
BLAST of FC920907 vs. ExPASy Swiss-Prot
Match: SUL1_YEAST (Sulfate permease 1 OS=Saccharomyces cerevisiae GN=SUL1 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23
Identity = 49/143 (34.27%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  217 IFPILEWGPNYSFKLFKSDIISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYTVLGSSRDLAVGPVSIASLIMGSMLRQ---EVSPTQNPVXXXXXXXXXXXXGGLVQASLGLLRLGFIIDFLSKATLIGFMAGAA 636
            +FPI++W P+Y+F    +D+++G+T+  + +PQ +SYA++A+L P  GLYSSF+   +Y++  +S+D+ +GPV++ SL    ++ +   +    Q  V             G+V   LG+LRLGF+++ +S   + GFM G+A
Sbjct:  106 LFPIIKWFPHYNFTWGYADLVAGITVGCVLVPQSMSYAQIASLSPEYGLYSSFIGAFIYSLFATSKDVCIGPVAVMSLQTAKVIAEVLKKYPEDQTEVTAPIIATTLCLLCGIVATGLGILRLGFLVELISLNAVAGFMTGSA 248          
The following BLAST results are available for this feature:
BLAST of FC920907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
SUT35_ARATH1.934e-4247.72Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]
SUT22_ARATH2.614e-3952.03Sulfate transporter 2.2 OS=Arabidopsis thaliana GN... [more]
SUT3_STYHA1.873e-3747.37Low affinity sulfate transporter 3 OS=Stylosanthes... [more]
NO70_SOYBN4.941e-3036.60Early nodulin-70 OS=Glycine max PE=2 SV=1[more]
SUT41_ARATH4.624e-2838.92Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]
SUT42_ARATH1.030e-2739.08Probable sulfate transporter 4.2 OS=Arabidopsis th... [more]
SULH2_SCHPO1.539e-2336.67Probable sulfate permease C869.05c OS=Schizosaccha... [more]
S2611_HUMAN3.429e-2337.18Sodium-independent sulfate anion transporter OS=Ho... [more]
SULH1_SCHPO4.479e-2336.88Probable sulfate permease C3H7.02 OS=Schizosacchar... [more]
SUL1_YEAST9.978e-2334.27Sulfate permease 1 OS=Saccharomyces cerevisiae GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32014F06EF RVDevelop1 Citrus clementina cDNA clone C32014F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920907 ID=FC920907; Name=FC920907; organism=Citrus clementina; type=EST; length=719bp
GATAGCAGCAACGACAACAATTCGATGCAGCTGCAGCATCATAGCAGCTG
CTTAGAGATAGCAACAATGGAGGTGCACAGAGTCGTGCCACCACCGCATA
AAAGCACAATAGAGAAGCTGAAAAGAAGGCTCAAAGAAACCTTCTTCCCC
GATGACCCTTTGCGCCAATTCAAAGGGCAGCCATTAGGGAAGAAATGGAT
CCTTGCTGCCCAGTACATATTCCCTATCCTTGAATGGGGCCCTAATTACA
GCTTCAAGCTCTTCAAATCTGATATCATATCTGGCCTCACCATTGCCAGC
TTGGCCATTCCTCAGGGTATCAGTTATGCAAAGCTTGCCAATCTTCCTCC
AATAGTTGGTCTCTATTCAAGCTTTGTGCCTCCTCTTGTGTATACTGTGC
TTGGAAGCTCAAGGGATCTTGCAGTTGGGCCAGTTTCAATTGCTTCTCTT
ATTATGGGATCAATGCTTAGACAAGAAGTATCTCCCACTCAGAATCCTGT
TCTGTTTCTTCAACTAGCTTTTACAGCTACTTTTTTCGGTGGTCTTGTCC
AAGCTTCACTAGGATTATTAAGGCTCGGATTTATCATTGATTTTCTATCG
AAGGCAACTCTCATCGGGTTCATGGCAGGGGCTGCCATTATAGTCTCTCT
TCAACACTCAAAAGCCTTCTTGGATCACTCATTTCACAAACCAATGGGTT
TGGNTCCTGTTATGAGCTC
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