FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK7_ORYSJ (Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3)

HSP 1 Score: 318.546 bits (815), Expect = 1.998e-86
Identity = 147/227 (64.76%), Postives = 185/227 (81.50%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQ+II+ATFSI+KQC +LGCFPRVK++HTS  IHGQIYIPEINW LM+LCLA+T+GFRDT  +GNA GLA I VM VTT LM+LVI+  W ++           GS+E +Y SA++ K  +G W PI  +F+F++ MYVWHYG+ +KY FD+QNKVS+ WIL+LGP+LGIVRV GIGLI+TELV+G+P+IFSHFVTNLPAFHQV+VF+C+KSVPVP V  DER+L+
Sbjct:  382 GSQSIISATFSIVKQCLSLGCFPRVKVVHTSRWIHGQIYIPEINWILMVLCLAVTLGFRDTTVIGNAYGLACIVVMFVTTWLMALVIIFVWQKNILLALLFVVAFGSIEVVYLSAAVTKVPQGGWAPIVFAFVFMLVMYVWHYGSRRKYLFDLQNKVSMKWILTLGPSLGIVRVPGIGLIYTELVTGVPSIFSHFVTNLPAFHQVLVFVCVKSVPVPFVPEDERYLI 608          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK2_ORYSJ (Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.870e-84
Identity = 142/227 (62.56%), Postives = 185/227 (81.50%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA+I+ATFSI+KQC +LGCFPRVK++HTS  I+GQIYIPEINW LM+LC+A+TV FRD   +GNA G+A +TVM VTT LM+L+++  W ++           GSVE +Y S+SL+K  +G WVP+ L+ IF+  MY+WHYGT KKY++D+QNKVS+ +ILSLGP+L +VRV GIGLI+TELV+G+P IF+HF TNLPAFH+V+VFLC+KSVPVP+V PDER+LV
Sbjct:  354 GSQAVISATFSIVKQCHSLGCFPRVKVVHTSRWIYGQIYIPEINWILMVLCVAVTVAFRDITLIGNAYGVACMTVMFVTTFLMALIMIFVWQKNIIFALSFFLLFGSVEVVYLSSSLMKVTQGGWVPLVLALIFMSVMYIWHYGTRKKYQYDLQNKVSMRYILSLGPSLDVVRVPGIGLIYTELVTGVPNIFTHFTTNLPAFHEVLVFLCVKSVPVPYVSPDERYLV 580          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT1_ARATH (Potassium transporter 1 OS=Arabidopsis thaliana GN=POT1 PE=1 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 4.167e-84
Identity = 143/227 (63.00%), Postives = 183/227 (80.62%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA+I+ATFSII QC AL CFPRVKIIHTSSKIHGQIYIPE+NW LM LCLA+T+G RDT  MG+A GLAV +VMLVTTCLM+LV+ + W Q            GS+E LYFS+ + K  EG W+PI LS  F+  MY+W+YGT KK+EFDV+NKVS++ I+SLGP++G+VRV GIGL+++ LV+G+PA+F HFVTNLPAFH+++VF+C+KSV VP+V  +ERF++
Sbjct:  356 GSQAVISATFSIISQCCALDCFPRVKIIHTSSKIHGQIYIPEVNWMLMCLCLAVTIGLRDTNMMGHAYGLAVTSVMLVTTCLMTLVMTIVWKQRIITVLAFVVFFGSIELLYFSSCVYKVPEGGWIPILLSLTFMAVMYIWNYGTTKKHEFDVENKVSMDRIVSLGPSIGMVRVPGIGLVYSNLVTGVPAVFGHFVTNLPAFHKILVFVCVKSVQVPYVGEEERFVI 582          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT10_ARATH (Putative potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.031e-75
Identity = 132/226 (58.41%), Postives = 169/226 (74.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA I+ATFS+IKQ  A GCFPRVK++HTS K  GQIY+P+INW LM+LC+A+T GF++   +GNA G AV+ VMLVTT LM L+++L W                VE  YFSA L K  +G WVP+ ++  FLV MYVWHYGTLK+YEF++ +KVS+ WIL LGP+LG+VRV GIGL++TEL SG+P IFSHF+TNLPA H VV+F+C+K++PV  V  +ERFLV
Sbjct:  376 SQATISATFSLIKQALAHGCFPRVKVVHTSRKFLGQIYVPDINWILMILCIAVTAGFKNQNQIGNAYGTAVVIVMLVTTLLMMLIMILVWRCHWVLVLLFTLLSLVVECTYFSAVLFKVNQGGWVPLVIAAAFLVIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPATHSVVIFVCVKNLPVYTVPQEERFLV 601          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT11_ARATH (Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.137e-73
Identity = 128/226 (56.64%), Postives = 169/226 (74.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA I+ATFS++KQ  A GCFPRVK++HTS K  GQIY+P+INW LM+LC+A+T GF++   +GNA G AV+ VMLVTT LM+L+++L W                VE  YFSA L K  +G WVP+ ++  FL+ M+VWHYGTLK+YEF++  +VS+ WIL LGP+LG+VRV G+GL++TEL SG+P IFSHF+TNLPA H VVVF+C+K++PV  V  +ERFLV
Sbjct:  386 SQATISATFSLVKQALAHGCFPRVKVVHTSRKFLGQIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHWVLVLIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHCRVSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLPVYTVPEEERFLV 611          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK13_ORYSJ (Probable potassium transporter 13 OS=Oryza sativa subsp. japonica GN=HAK13 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.801e-72
Identity = 126/227 (55.51%), Postives = 164/227 (72.25%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQAII+ATFSII QC ALGCFPR+K++HTSS +HGQIYIPE+NW LM LCLA+T+GFRDT+ +GNA GLAVI VM  TTCLM LVI   W++            GSVE LY SA L K   G W+P+ LS   L+ M  WHYGT  K + +VQNKV ++  L L   +G+VRV G+G +++   +G+P +F+HFVTN PAFH+V++F+ ++++ VP V P+ERFLV
Sbjct:  359 GSQAIISATFSIISQCRALGCFPRIKVVHTSSHVHGQIYIPEVNWVLMSLCLAVTIGFRDTEMIGNAYGLAVILVMCATTCLMFLVITTVWNRWVVWAAAFTVVFGSVELLYLSACLAKVPHGGWLPLLLSLTTLLVMSTWHYGTAMKQQHEVQNKVCLDHFLGLSSGIGLVRVPGVGFVYSSTTNGVPPMFAHFVTNFPAFHRVLIFVSLQTLAVPKVSPEERFLV 585          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK11_ORYSJ (Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3)

HSP 1 Score: 271.552 bits (693), Expect = 2.801e-72
Identity = 129/226 (57.08%), Postives = 166/226 (73.45%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA I+AT+SIIKQ  ALGCFPRVKI+HTS K  GQIYIP+INW L++LC+A+T GF++   +GNA G AV+ VMLVTT LM  +++L W                VE  YFSA L+K  +G WVP+ ++  F + MYVWH+ T+K+YEF++ +KVS+ WIL LGP+LG+VRV GIG ++TEL SG+P IFSHF+TNLPA H VVVF+C+K +PV  V  DERFLV
Sbjct:  376 SQATISATYSIIKQALALGCFPRVKIVHTSKKFLGQIYIPDINWVLLILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTFLMVPIMLLVWKSHWILVVTFIVLSLMVEIPYFSACLLKIDQGGWVPLVIATAFFIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPMDERFLV 601          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK18_ORYSJ (Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.151e-72
Identity = 131/226 (57.96%), Postives = 164/226 (72.57%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA I+AT+SIIKQ  ALGCFPRVKIIHTS K  GQIY P+INW LM+ C+A+T GF++   + NA G AVI VMLVTT LM  +++L W                VE  YFSA + K  +G WVP+  +  F++ MYVWHYGTLK+YEF++ +KVS+ WIL LGP+LG+VRV GIGL++TEL SG+P IFSHF+TNLPA H  +VF+C+K +PV  V PDERFLV
Sbjct:  374 SQATISATYSIIKQALALGCFPRVKIIHTSKKYLGQIYSPDINWILMVFCIAVTAGFKNQSQIANAYGTAVIMVMLVTTFLMIPIMLLVWRSHWTLVVAFTVLSLLVEIPYFSAVVRKIDQGGWVPLVFAAGFMIIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSTLVFVCVKYLPVYTVPPDERFLV 599          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT9_ARATH (Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.390e-71
Identity = 130/227 (57.27%), Postives = 164/227 (72.25%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            GSQA I+ T+SI+KQ  A GCFPRVKI+HTS K  GQIY P+INW LML C+A+T  F+    +GNA G AV+ VMLVTT LM L+++L WH               VE  YFSA + K  EG WVP+ ++ I L+ M VWHY T+KKYEF++ +KVS++WIL LGP+LG+VRV GIGL++TEL SG+P IFSHF+TNLPA H VVVF+C+K +PV  V  +ERFLV
Sbjct:  385 GSQATISGTYSIVKQAVAHGCFPRVKIVHTSKKFLGQIYCPDINWILMLGCIAVTASFKKQSQIGNAYGTAVVLVMLVTTLLMVLIMLLVWHCHWILVLIFTFLSFFVELSYFSAVIFKIDEGGWVPLIIAAISLLVMSVWHYATVKKYEFEMHSKVSMSWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLV 611          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT3_ARATH (Potassium transporter 3 OS=Arabidopsis thaliana GN=POT3 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.945e-69
Identity = 122/226 (53.98%), Postives = 165/226 (73.01%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I ATFSI+KQC ALGCFPRVKI+H    + GQIYIPEINW +M+L LA+T+ FRDT+H+  A GLA +T+  VTT LM L+I   W+++           G++E ++ +++L+K  +G W+ + LS  F    YVWHYG+ KKY  D  NKV +  ILSLGP+LGI++V G+GLI+TEL SG+PA F HF+TNLPAF+QVVVF+C K+VP+P+V   ER+L+
Sbjct:  343 SQAVIFATFSIVKQCYALGCFPRVKIVHKPRWVLGQIYIPEINWVVMILTLAVTICFRDTRHIAFAFGLACMTLAFVTTWLMPLIINFVWNRNIVFSVLFILFFGTIELIFVASALVKIPKGGWITLLLSLFFTFITYVWHYGSRKKYLCDQHNKVPMKSILSLGPSLGIIKVPGMGLIYTELASGVPATFKHFLTNLPAFYQVVVFVCCKTVPIPYVPQKERYLI 568          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
HAK7_ORYSJ1.998e-8664.76Potassium transporter 7 OS=Oryza sativa subsp. jap... [more]
HAK2_ORYSJ1.870e-8462.56Probable potassium transporter 2 OS=Oryza sativa s... [more]
POT1_ARATH4.167e-8463.00Potassium transporter 1 OS=Arabidopsis thaliana GN... [more]
POT10_ARATH6.031e-7558.41Putative potassium transporter 10 OS=Arabidopsis t... [more]
POT11_ARATH1.137e-7356.64Potassium transporter 11 OS=Arabidopsis thaliana G... [more]
HAK13_ORYSJ2.801e-7255.51Probable potassium transporter 13 OS=Oryza sativa ... [more]
HAK11_ORYSJ2.801e-7257.08Probable potassium transporter 11 OS=Oryza sativa ... [more]
HAK18_ORYSJ8.151e-7257.96Potassium transporter 18 OS=Oryza sativa subsp. ja... [more]
POT9_ARATH1.390e-7157.27Potassium transporter 9 OS=Arabidopsis thaliana GN... [more]
POT3_ARATH4.945e-6953.98Potassium transporter 3 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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