FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_LEGPL (Probable potassium transport system protein kup 2 OS=Legionella pneumophila (strain Lens) GN=kup2 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25
Identity = 69/224 (30.80%), Postives = 115/224 (51.34%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERF 675
            SQAII+A FSI+KQ S L   PR+KI+ TS    G++Y+P IN+ L L   ++ V F+ + ++ +A G+AV   ML+TT L+ ++   CW                +E  +F+ ++ K L G W+P+ ++F+  V MY WH G  K  E   ++ +   +I+       I R  G+GL   +          H +     F + +VF+ IK    P++  +++F
Sbjct:  299 SQAIISAAFSILKQASLLNLIPRLKIVFTSKFEKGEVYLPLINFILALGTCSLVVIFKSSSNLADAYGIAVNLDMLITTVLVGIIAYRCWSWHAFKILIFLLIL-IIELAFFAGNIPKLLTGGWIPVLIAFLGFVVMYTWHCGFEKLRELHHRDALMDAFIIDELNQNKISRQPGMGLYIIDPYDYEGESLLHHLRLNRIFFENMVFVSIKIENKPYIPIEDKF 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_NOVAD (Probable potassium transport system protein kup 1 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=kup1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25
Identity = 62/226 (27.43%), Postives = 109/226 (48.23%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PR+ I HTS+   GQI+IP INW LM+  + + + F+ + ++  A G+AV   ML+   L+++V+   W               +++A Y  A++ K  +G WVP+ +       +  W  G     E   +  + ++ + +   +    RV G  +      +G+P+   H + +    H+ VV L +    VP+V   ER+ V
Sbjct:  329 SQAVISGAFSVTQQAIQLGFIPRMTIKHTSTAA-GQIFIPVINWALMIAVILLVLVFQRSSNLTAAYGIAVTGAMLIDNFLLAVVLFKLWQWKAPAAIAMLAVFFAIDAAYLGANMTKIPDGGWVPLVMGIAIFTLLTTWSRGRALMRENMAEGTIPLD-VFTKSAHSSAARVSGTAIFMASTAAGVPSALLHNIKHNKVLHERVVILTVSIEDVPYVDEGERYSV 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_MAGSA (Probable potassium transport system protein kup 1 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=kup1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25
Identity = 72/233 (30.90%), Postives = 112/233 (48.07%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLG-------PNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PR+ I HTS +  GQIYIP  NW L+L  +A+ VGF+ + ++  A G+AV   M  TT L  +V    W+              +V+  +  A+L+K  +G W P+A+    L+ M  W  G       D+ ++   +  L L         +  I+RVRG  +  T     +P    H + +    HQ VVFL + +  +P V   +R +V
Sbjct:  318 SQAVISGVFSLSRQAVQLGYSPRLDIRHTSDEEEGQIYIPRANWGLLLGIVALVVGFKSSSNLAAAYGIAVTGTMAATTILALVVAHRSWNWPLWLCLGLGAVFLAVDLGFLGANLLKVTQGGWFPLAVGLGMLLLMATWRKGR------DILSRRLADGALPLDMFMQQQKDSTSILRVRGTAVFMTGGTDTVPIALLHNLKHNKVLHQRVVFLTVITEDIPRVSARDRVVV 544          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERE8 (Low affinity potassium transport system protein kup OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=kup PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 65/226 (28.76%), Postives = 108/226 (47.79%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  P ++IIHTS    GQIYIP INWTL L  + + VGF  + ++  A G+AV   M++T+ L   V +  WH +             ++   FSA+ +K   G W+P++L  +  + M  W            ++  S+  +++       VRV G  +  +  ++ IP    H + +    H  VV L +++   P+V    R  +
Sbjct:  302 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIVGFERSSNLAAAYGIAVTGTMVITSVLFCTVALKNWHWNRFFVYFLLVALLVIDVPMFSANALKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHDRVVLLTLRTEDAPYVHNVNRVTI 527          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_XANC5 (Probable potassium transport system protein kup OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=kup PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 69/229 (30.13%), Postives = 110/229 (48.03%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGI---VRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  +S+  Q   LG  PR+ I HTS    GQIY+P +NW L+ L     +GF D+  +  A G++V   ML+TT LM +                     +V+  +F A++IKFL+GAW P+ L  I    M  W  G    ++   ++ + ++  L   P L +   VRV G  +  T     +P    H + +    H+  VFL ++++ VP+    +R  +
Sbjct:  312 SQALITGAYSVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLALVAVAVIGFGDSASLATAYGVSVTGTMLITTVLMIIYARANPRVPAPLLWLFALVFLAVDCAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFL---PGLMLAPPVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQVPYAAAGKRLKI 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_XANAC (Probable potassium transport system protein kup OS=Xanthomonas axonopodis pv. citri GN=kup PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 69/229 (30.13%), Postives = 110/229 (48.03%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGI---VRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  +S+  Q   LG  PR+ I HTS    GQIY+P +NW L+ L     +GF D+  +  A G++V   ML+TT LM +                     +V+  +F A++IKFL+GAW P+ L  I    M  W  G    ++   ++ + ++  L   P L +   VRV G  +  T     +P    H + +    H+  VFL ++++ VP+    +R  +
Sbjct:  312 SQALITGAYSVASQAMQLGYIPRMHIRHTSHSTIGQIYVPAVNWCLLALVAVAVIGFGDSASLATAYGVSVTGTMLITTVLMIIYARANPRVPAPLLWLFALVFLAVDCAFFYANIIKFLDGAWFPLLLGLILFTLMRTWRRGRKLLHDEIRKDGIKLDTFL---PGLMLAPPVRVPGTAVFLTADPMVVPHALMHNLKHNKVLHERNVFLTVETLQVPYAAAGKRLKI 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BRUAB (Probable potassium transport system protein kup OS=Brucella abortus GN=kup PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 65/223 (29.15%), Postives = 109/223 (48.88%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   L   PR++I HTS K+HGQIYIP +N  L L  + + +GF  + ++  A G+AV   MLVTT L+ + +   W+               ++ L+FSA++IK  EG W  I ++ + ++ M+ W  GT   ++   + +V ++ I+          V G  +  T      P    H + +    H+  V L + +   P V   +R
Sbjct:  330 SQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIAMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVASADR 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BRUA2 (Probable potassium transport system protein kup OS=Brucella abortus (strain 2308) GN=kup PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 65/223 (29.15%), Postives = 109/223 (48.88%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   L   PR++I HTS K+HGQIYIP +N  L L  + + +GF  + ++  A G+AV   MLVTT L+ + +   W+               ++ L+FSA++IK  EG W  I ++ + ++ M+ W  GT   ++   + +V ++ I+          V G  +  T      P    H + +    H+  V L + +   P V   +R
Sbjct:  330 SQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIAMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVASADR 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BRUA1 (Probable potassium transport system protein kup OS=Brucella abortus (strain S19) GN=kup PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 65/223 (29.15%), Postives = 109/223 (48.88%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   L   PR++I HTS K+HGQIYIP +N  L L  + + +GF  + ++  A G+AV   MLVTT L+ + +   W+               ++ L+FSA++IK  EG W  I ++ + ++ M+ W  GT   ++   + +V ++ I+          V G  +  T      P    H + +    H+  V L + +   P V   +R
Sbjct:  330 SQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIAMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVASADR 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PROAC (Probable potassium transport system protein kup OS=Propionibacterium acnes GN=kup PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.665e-24
Identity = 70/223 (31.39%), Postives = 107/223 (47.98%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT--LKKYEFDVQNKVS--INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVR 660
            SQA+I+  FS+  + + LG  PR+ + HTS    GQIYIPE+NWTL +  LA+ + F+ +  +  A GLAV    L+TT L  ++    WH             G VE   FSA+L+K   G W+P+  + I ++ M  W  GT  + K   D +  +   +NW+    P     RV G+ +      +  P    + +      H+  + + I    VPHVR
Sbjct:  322 SQAVISGAFSMSSEAARLGLLPRLGVRHTSKSEGGQIYIPEVNWTLFIGVLALILIFQTSSKLATAYGLAVTGTFLLTTSLFLVLAHRAWHWPMWALIFFGVIVGGVELSIFSANLLKIASGGWIPLLFATIVVIIMTTWRRGTAYIAKQRQDDEGPLDDFLNWMHETKP----TRVPGLAVYPHPGRATTPLALLNNLRFNHVLHEHNIIISIVVENVPHVR 540          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP2_LEGPL9.763e-2530.80Probable potassium transport system protein kup 2 ... [more]
KUP1_NOVAD9.763e-2527.43Probable potassium transport system protein kup 1 ... [more]
KUP1_MAGSA9.763e-2530.90Probable potassium transport system protein kup 1 ... [more]
KUP_YERE81.275e-2428.76Low affinity potassium transport system protein ku... [more]
KUP_XANC51.275e-2430.13Probable potassium transport system protein kup OS... [more]
KUP_XANAC1.275e-2430.13Probable potassium transport system protein kup OS... [more]
KUP_BRUAB1.275e-2429.15Probable potassium transport system protein kup OS... [more]
KUP_BRUA21.275e-2429.15Probable potassium transport system protein kup OS... [more]
KUP_BRUA11.275e-2429.15Probable potassium transport system protein kup OS... [more]
KUP_PROAC1.665e-2431.39Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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