FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK12_ORYSJ (Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.945e-69
Identity = 123/226 (54.42%), Postives = 163/226 (72.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA I+AT+SIIKQ  ALGCFPRV ++HTS K  GQIYIP+INW LM+LC+A+T GF++   +GNA G AV+ VMLVTT LM  +++L W                VE  YF+A + K  +G WVP+ ++    + MYVWH+ T+K+YEF++ +KVS+ WIL LGP+LG+VRV GIG ++TEL SG+P IFSHF+TNLPA H VVVF+C+K +PV  V  +ERF+V
Sbjct:  376 SQATISATYSIIKQALALGCFPRVSVVHTSKKFLGQIYIPDINWVLMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTFLMVPIMLLVWKSHWILVVIFIVLSLMVELPYFTACINKVDQGGWVPLVVATTCFIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPTEERFIV 601          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK23_ORYSJ (Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.489e-65
Identity = 118/225 (52.44%), Postives = 160/225 (71.11%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+I+ATFS IKQ  ALGCFPR+KIIHTS K+ GQIYIP +NW LM++C+ I   FR T  + NA G+A + VM+V+T L++LV++L W  +           GSVE +Y +A L K  EG W+P+A S +FL  MY W+YG++ KY+ +++ K+S+++IL LG  LG VRV GIGL++ ELV GIP+IF H +  LPA H  +VF+CIK VPVP+V  +ERFL
Sbjct:  463 SQAMISATFSCIKQAMALGCFPRIKIIHTSKKVMGQIYIPVMNWFLMVMCIIIVATFRSTNDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLVMCFPVIFGSVEFVYLTAVLSKIQEGGWLPLAFSSLFLCIMYTWNYGSVLKYQSEMRGKISLDFILDLGSTLGTVRVPGIGLVYNELVQGIPSIFGHLLVTLPAMHSTIVFVCIKYVPVPYVPFEERFL 687          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT12_ARATH (Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.394e-63
Identity = 113/225 (50.22%), Postives = 157/225 (69.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+I+ATFS +KQ  ALGCFPR+KIIHTS K  GQIYIP INW LM++C+ +   FR T H+ NA G+A + VM+V+T L++LV++L W  +           GSVE +Y  A L K LEG WVP+  +  FL  MY+W+YG++ KY+ +V+ ++S++++  LG  LG +R+ GIGL++ ELV GIP+IF  F+  LPA H  ++F+CIK VPVP V  +ERFL
Sbjct:  419 SQAMISATFSCVKQAMALGCFPRLKIIHTSKKRIGQIYIPVINWFLMIMCILVVSIFRSTTHIANAYGIAEVGVMMVSTVLVTLVMLLIWQTNIFLALCFPLIFGSVETIYLLAVLTKILEGGWVPLVFATFFLTVMYIWNYGSVLKYQSEVRERISMDFMRELGSTLGTIRIPGIGLLYNELVQGIPSIFGQFLLTLPAIHSTIIFVCIKYVPVPVVPQEERFL 643          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT7_ARATH (Potassium transporter 7 OS=Arabidopsis thaliana GN=POT7 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.676e-56
Identity = 103/225 (45.78%), Postives = 149/225 (66.22%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            S+ + TATFS IKQ +ALGCFPR+KIIHTS K  GQIYIP +NW L+ +CL +         +GNA G+A + VM+ TT L++L+++L W  +             VE ++FS+ +    +G+W+ +  + I    MY+W+YG+  +YE +V+ K+S++ +  LG NLG +R  GIGL++ ELV G+PAIF HF+T LPA H +V+F+CIK VPVP V  +ERFL
Sbjct:  435 SRTMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSIDEIGNAYGMAELGVMMTTTILVTLIMLLIWQINIVIVIAFLVVFLGVELVFFSSVIASVGDGSWIILVFAVIMFGIMYIWNYGSKLRYETEVEQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGVPAIFGHFLTTLPAIHSMVIFVCIKYVPVPVVPQNERFL 659          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT13_ARATH (Potassium transporter 13 OS=Arabidopsis thaliana GN=POT13 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.397e-55
Identity = 102/225 (45.33%), Postives = 149/225 (66.22%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            S+A+ TATF+ IKQ  ALGCFPR+KIIHTS K  GQIYIP +NW+L+++CL +     +   +GNA G+A + +M+ TT L++L+++L W  +             VE ++FS+      +G+W+ +  + I  + M+VW+YG+  KYE +VQ K+ ++ +  LG NLG +R  GIGL++ EL  G+PAIF HF+T LPA H +V+F+CIK VPVP V   ERFL
Sbjct:  436 SRAMTTATFTCIKQSIALGCFPRLKIIHTSKKFIGQIYIPVLNWSLLVVCLIVVCSTSNIFAIGNAYGIAELGIMMTTTILVTLIMLLIWQTNIIVVSMFAIVSLIVELVFFSSVCSSVADGSWIILVFATIMFLIMFVWNYGSKLKYETEVQKKLPMDLLRELGSNLGTIRAPGIGLLYNELAKGVPAIFGHFLTTLPAIHSMVIFVCIKYVPVPSVPQTERFL 660          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK5_ORYSJ (Potassium transporter 5 OS=Oryza sativa subsp. japonica GN=HAK5 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.932e-55
Identity = 98/225 (43.56%), Postives = 147/225 (65.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+I+  F+II Q   LGCFPRV++IHTS+K HGQ+YIPEIN+ LM+LC+A+T  F+ T  +GNA G+AV+ VM +TT L++LV+V+ W  S           G  E +Y S++  KF +G ++P+  S I +  M  WHY  + +Y+++++NKVS N++  L     + R+ GIG +++ELV GIP I  H V  +P+ H V+V + IK +P+  +   ERFL
Sbjct:  391 SQAMISGAFAIIAQSQILGCFPRVRVIHTSTKFHGQVYIPEINYVLMVLCVAVTAIFQTTDKIGNAYGIAVVFVMFITTLLVTLVMVMIWKTSLLWIALFPVIFGGAELIYLSSAFYKFTQGGYLPLVFSAILMFIMATWHYVHVHRYKYELRNKVSNNYVAELAVKQNLARLPGIGFLYSELVQGIPPILPHLVEKVPSIHSVLVIISIKYLPISKIETKERFL 615          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK14_ORYSJ (Probable potassium transporter 14 OS=Oryza sativa subsp. japonica GN=HAK14 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.634e-54
Identity = 100/225 (44.44%), Postives = 148/225 (65.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            S+ + TA FS IKQ +ALGCFPR+KIIHTS    GQIYIP +NW L++ CLA    F     +GNA G+A + VM++TT L++++++L W  +             +E ++FS+ L    +G+WV +  + +  + MY+W+YGT  KYE +V+ K+S++ ++ LG NLG VRV GIGL++ EL  G+P IF  F+  +PA H +++F+CIK VPVP V  +ERFL
Sbjct:  443 SRTMTTAIFSTIKQATALGCFPRLKIIHTSRSFMGQIYIPMMNWFLLVSCLAFVTMFGSINEIGNAYGIAELGVMMMTTVLVTIIMLLIWQINIIVVLCFLTLSLGLELIFFSSVLGSVADGSWVLLVFAAVLYLIMYIWNYGTKLKYETEVKQKLSMDLLMELGCNLGTVRVPGIGLLYNELARGVPGIFGQFLATMPAIHSMIIFVCIKWVPVPVVPQNERFL 667          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: POT5_ARATH (Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.913e-53
Identity = 93/224 (41.52%), Postives = 151/224 (67.41%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERF 675
            SQA+I+  FS+I Q   +GCFPRVK++HTS+K  GQ+YIPEIN+ LML C+A+T+ FR T+ +G+A G+AV+TVM++TT +++L++++ W  +           GS+E LY S+ + KF  G ++P+ ++ + +  M +W Y  + KY ++++ K+S    + +  +  + RV GIGL +TELV+GI  +FSH+++NL + H V V + IK++PV  V   ERF
Sbjct:  384 SQAMISGAFSVISQSLRMGCFPRVKVVHTSAKYEGQVYIPEINYLLMLACIAVTLAFRTTEKIGHAYGIAVVTVMVITTLMVTLIMLVIWKTNIVWIAIFLVVFGSIEMLYLSSVMYKFTSGGYLPLTITVVLMAMMAIWQYVHVLKYRYELREKISRENAIQMATSPDVNRVPGIGLFYTELVNGITPLFSHYISNLSSVHSVFVLISIKTLPVNRVTSSERF 607          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK15_ORYSJ (Probable potassium transporter 15 OS=Oryza sativa subsp. japonica GN=HAK15 PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 9.369e-52
Identity = 96/225 (42.67%), Postives = 145/225 (64.44%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            S+ + TA F  +KQ  ALGCFPR+KIIHTS K   +IYIP +NW L+  CL   + FR    +GNA  +A + VM++ T  ++++++L W  S            S+E ++FS+SL    +G W  I  +   L+ M++W+YG+  KY+ +V+ K+S + +  LGPNLG +R  G+GL+++E+V G+PAIF HF+  LPA H ++VF+CI++VPVP V   ERFL
Sbjct:  455 SRTMTTAIFQCLKQSIALGCFPRLKIIHTSRKFMAKIYIPVVNWFLLFSCLGFILLFRSIYDVGNAYAIAELGVMIMATVYVTIIMLLIWETSIVKVLSFVITFLSLELVFFSSSLSSVGDGGWALIIFASGILMVMFIWNYGSKLKYDSEVKKKLSKDLMRKLGPNLGTIRAPGLGLVYSEIVKGVPAIFGHFLIALPAIHSIIVFVCIRNVPVPVVPQTERFL 679          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK22_ORYSJ (Potassium transporter 22 OS=Oryza sativa subsp. japonica GN=HAK22 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.598e-51
Identity = 93/226 (41.15%), Postives = 143/226 (63.27%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            GSQA+I+  F+ I    A+GCFPRVK++HTS +  GQ+YIPEIN  L      +TV  RDT  +G A G+ V+ VML+TT L+++V+VL W  +            S E++Y ++ L KF  G ++P+A+S + +  M VWHY  +++Y+++++  VS   +  L     + RV G+GL +T+LV GIP +F H +  +P+ H V++F+ +K +PVPHV P ERFL
Sbjct:  401 GSQAMISCAFATISHSQAMGCFPRVKVVHTSRQYQGQVYIPEINLLLGAAACVVTVAARDTVVIGEAHGICVVLVMLITTLLLTVVMVLVWRVNIGWVLVFACVFASTESVYLTSVLYKFAHGGYIPVAMSAVLMGVMGVWHYVHVRRYKYEMERTVSTERVRELVSRRELQRVPGVGLFYTDLVQGIPPVFPHLIDKIPSIHTVLLFVSVKHLPVPHVDPSERFL 626          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
HAK12_ORYSJ4.945e-6954.42Putative potassium transporter 12 OS=Oryza sativa ... [more]
HAK23_ORYSJ1.489e-6552.44Potassium transporter 23 OS=Oryza sativa subsp. ja... [more]
POT12_ARATH1.394e-6350.22Putative potassium transporter 12 OS=Arabidopsis t... [more]
POT7_ARATH3.676e-5645.78Potassium transporter 7 OS=Arabidopsis thaliana GN... [more]
POT13_ARATH1.397e-5545.33Potassium transporter 13 OS=Arabidopsis thaliana G... [more]
HAK5_ORYSJ6.932e-5543.56Potassium transporter 5 OS=Oryza sativa subsp. jap... [more]
HAK14_ORYSJ2.634e-5444.44Probable potassium transporter 14 OS=Oryza sativa ... [more]
POT5_ARATH2.913e-5341.52Potassium transporter 5 OS=Arabidopsis thaliana GN... [more]
HAK15_ORYSJ9.369e-5242.67Probable potassium transporter 15 OS=Oryza sativa ... [more]
HAK22_ORYSJ1.598e-5141.15Potassium transporter 22 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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