FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_AERHH (Probable potassium transport system protein kup 1 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=kup1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21
Identity = 60/223 (26.91%), Postives = 108/223 (48.43%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+ T+S+++Q   LG  PR +I HTS    GQIY+P +NW L+   + + + F+ + ++  A G+AV   M +TT L+ +V    W  S             V+  +F+A+  KFL G W+PI  + + ++ M  W  G     +      +++   +        ++V G  +  ++ V  +P    H + +    H+ V+FL ++    P +   ER
Sbjct:  307 SQAVISGTYSVVRQAILLGYLPRQEIRHTSEHEIGQIYLPLVNWLLLGGIIIVIIWFQSSSNLAAAYGIAVTGTMALTTLLLMVVAARRWKWSRWLIALICAPLLLVDVTFFAANTTKFLAGGWLPILFALLAIIVMTTWKRGRELVLDKLEHKSLALKGFVDNMQAHPPLQVPGTAVFLSKSVQVVPHAMLHNLKHNKILHERVIFLTVQIKDEPWLSFKER 529          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PSESM (Probable potassium transport system protein kup OS=Pseudomonas syringae pv. tomato GN=kup PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 68/230 (29.57%), Postives = 106/230 (46.09%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVW----HYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+  Q   LG  PR+ I HTSS   GQIYI  +NW LM+  + + +GF  +  + +A G+AV   ML TT L+S V+++ W                V+ L+F+A++ K  +G   P+    +  + M  W    H    +  E  +   + I  I    P+    RV+G  +  T     +P    H + +    H+ VV L +     P V   +RF V
Sbjct:  310 SQAVISGAFSMTLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMVGVIMLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWKWPPLLAVPLLICLLLVDGLFFAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKHLLAERIDEGGLPLPIFIGSIRVQPPH----RVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDTPRVPSAQRFEV 535          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_AGRT5 (Probable potassium transport system protein kup 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=kup1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.251e-21
Identity = 66/228 (28.95%), Postives = 109/228 (47.81%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT----LKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERF 675
            SQA+IT  FS+++Q   LG  PR++I+ TS    GQIY+P +N  L+   +A+ + F+ +  +  A G++V   M+VT+ +    +   W  S             +E ++  A+L+K  +G +VP+ L+  F V M  W  G+     K    DV  K  +  +     +   VRV G  +  T      PA   H + +    H   V L I++   P VRP++R+
Sbjct:  315 SQAVITGAFSLVRQAIHLGYLPRMEILFTSETNTGQIYLPAVNTILLFGVVALVLTFKSSDALATAYGISVTGAMVVTSLMFFEFVRKRWQWSIWLALAVLTPLLLLELIFLGANLLKIHDGGYVPVLLAIAFTVIMTTWQRGSRILFAKTRRGDVPLKAFVASVEKESAH-APVRVPGTAIFLTGDPEAAPAALLHNLKHNHVLHDKNVILTIRTEDQPRVRPEDRY 541          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_VEREI (Probable potassium transport system protein kup OS=Verminephrobacter eiseniae (strain EF01-2) GN=kup PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 66/227 (29.07%), Postives = 103/227 (45.37%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG-TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FS+ KQ   LG  PR+ I HTS +  GQIY+P +NW L +  +   V FR + ++  A G+AV   ML+TT L   VI   W                V+  +F+++L+K  +G W P+ +  I    M  W  G  L   +         +++ S+  N    RV G  +  T     +P    H + +    HQ  +F+ + +   P +  D R  +
Sbjct:  301 SQALITGAFSVTKQVIQLGYLPRLGIQHTSVRDTGQIYMPLVNWGLFVAIVLAVVMFRSSSNLAAAYGIAVTLDMLITTTLTFFVIRYGWGYPLALCVAATGCFAVVDLAFFASNLLKLFQGGWFPLMIGGIVFALMMTWKEGRRLLNVKLRADALDLKDFLASVFTN-PPTRVEGTAVFLTAGTGAVPNALLHNLKHNKVLHQQNLFVTVHNHETPWIGLDRRLQI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_NITWN (Probable potassium transport system protein kup OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=kup PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 61/223 (27.35%), Postives = 108/223 (48.43%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+I+Q   LG  PR ++ +TS    GQIY+P +N  L++  L + + FR +  + +A G+AV T M+    +  +V+   W+               V+ ++FSA+L+K  +GAWVP+      +V ++ W  G     +   + +V +  ++          V+G  +  T   + +P    H + +    H+  V L I++   P V P ER
Sbjct:  330 SQAVITGAYSLIRQGVQLGLLPRFEVRYTSETHAGQIYLPRVNLLLLIGVLLLVLLFRTSSGLASAYGIAVSTTMVADGIMGFVVVWKLWNWHPAAAAALVVPLVVVDMMFFSANLLKLFDGAWVPLLFGIAMVVLIWTWRRGVAILIKKTRRTEVPLLDLIQSLEKRPPHIVKGTAVFLTSDPNFVPTALLHNLKHNKVLHEHNVILTIETAQTPRVGPAER 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_CHLCH (Probable potassium transport system protein kup OS=Chlorobium chlorochromatii (strain CaD3) GN=kup PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 66/226 (29.20%), Postives = 100/226 (44.25%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR+ + HTS+K  GQIY+P  NW+LM+  +++ +GF  +  +  A G+AV   ML++T L   V    W  +             V+  +F AS  K   GAW P+ ++ +    M  W  G    LK+ +            L+L P     R  G  +  T     +P    H + +    H  V      +  VP V P+ R
Sbjct:  299 SQALITGVFSLTQQAIQLGYLPRLTVTHTSAKHMGQIYVPAANWSLMVATISLVIGFGSSSKLAAAYGVAVTATMLISTILFYYVARDLWRWNKSVLNVMIVVFLLVDLAFFGASASKLFHGAWFPLVIAAVMFTVMMTWKQGRGLLLKQLQDRTLTVEEFMSSLALQPP---YRTNGQAVYLTANPDLVPLAMLHNLRHNKVLHSEVALFHFSTERVPRV-PNNR 520          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_AGRT5 (Probable potassium transport system protein kup 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=kup2 PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 67/230 (29.13%), Postives = 115/230 (50.00%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSIN-WILSLGPNL------GIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  P++ I  TS    GQIY+P +N  L +  L +   F D++ +  A G++V   M+VTT +    +     +S            S+EA++ +A+L+K  +G WVP+AL+ + ++ M+ W  G+    E   +N VS++ +I SL  ++        V V G  +  T +    P++  H + +    H+  V L I +   P+V   +R
Sbjct:  309 SQAVITGAFSLARQAVHLGFLPKLMIRFTSETNTGQIYVPAVNMVLFIGVLVLIFSFGDSESLATAYGISVTGAMVVTTLMAFQFLRSIRGKSAFTAAILLAPLFSIEAVFLAANLLKVHDGGWVPLALAGVIILVMWTWTKGSRYLREKISKNDVSLDTFITSLERSISRESRSAPVLVSGTAVFLTSVPDKAPSVLLHNLKHNHVLHEQNVILTIWTHDKPYVADTDR 538          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_RHIEC (Probable potassium transport system protein kup 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=kup2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 64/226 (28.32%), Postives = 109/226 (48.23%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSI-NWILSL--GPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR++I  TS    GQIY+P +N  L+   L +   F D++ +  A G++V   M++TT L    +   W  S             +E ++ +A+L+K  +G WVP+AL+   +  M+ W  G     +    N++ + ++I S+    +   V V G  +  T +    P +  H + +    H+  V L + +   P+V PD R
Sbjct:  309 SQAVITGAFSLARQAVHLGFLPRLRIKFTSETNTGQIYVPSVNLLLLTGVLMLIFSFGDSESLATAYGISVTGAMVITTMLAFQFLRAVWGYSFMLASAALLPLFVIEVVFLAANLLKIQDGGWVPVALALAIMTLMWTWTRGQTYLKKLRANNEIPLDSFIRSIERKSDHSPVTVPGTAVFLTSVPDRTPNVLLHNLKHNHVLHEQNVILTVWTEDEPYV-PDNR 533          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PSEU2 (Probable potassium transport system protein kup OS=Pseudomonas syringae pv. syringae (strain B728a) GN=kup PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG----TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+  Q   LG  PR+ I HTSS   GQIYI  +NW LM   + + +GF  +  + +A G+AV   ML TT L+S V+++ W                V+ L+F+A++ K  +G   P+    +  + M  W  G      +  E  +   + I  I    P+    RV+G  +  T     +P    H + +    H+ VV L +     P V   +RF V
Sbjct:  310 SQAVISGAFSMTLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVILLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWKWPPLLAVPLLICLLLVDGLFFAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFIGSIRVQPPH----RVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPSAQRFEV 535          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BDEBA (Probable potassium transport system protein kup OS=Bdellovibrio bacteriovorus GN=kup PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 66/226 (29.20%), Postives = 103/226 (45.58%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FSI +Q   LG  PRV IIHTSS+  GQIYIP +NW++ +  + + + F+ + ++  A G+AV    ++TT L   V    W  S             ++  +F A++ K   G WVP+ +  I  + M  W  G    +    +  + I            +R  G  +       G+PA   H + +    HQ V  L I++  VP V   +R  +
Sbjct:  342 SQALITGVFSITRQAIQLGFCPRVNIIHTSSQEIGQIYIPIVNWSMFIGVIWLVLTFKTSSNLAAAYGIAVTGATMITTILAFEVARQKWKWSLLKSSAIFGSFLVMDLAFFGANVHKIPHGGWVPLVIGAIIYLLMTTWQKGRQILFRRLKERSMPIEDFCQKLLREPPLRAPGTAIYMAGDPWGVPAPLLHNMKHNKVLHQRVAILTIQTKEVPFVSKRDRISI 567          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP1_AERHH1.723e-2126.91Probable potassium transport system protein kup 1 ... [more]
KUP_PSESM2.251e-2129.57Probable potassium transport system protein kup OS... [more]
KUP1_AGRT52.251e-2128.95Probable potassium transport system protein kup 1 ... [more]
KUP_VEREI2.940e-2129.07Probable potassium transport system protein kup OS... [more]
KUP_NITWN3.839e-2127.35Probable potassium transport system protein kup OS... [more]
KUP_CHLCH3.839e-2129.20Probable potassium transport system protein kup OS... [more]
KUP2_AGRT53.839e-2129.13Probable potassium transport system protein kup 2 ... [more]
KUP2_RHIEC5.014e-2128.32Probable potassium transport system protein kup 2 ... [more]
KUP_PSEU26.549e-2129.57Probable potassium transport system protein kup OS... [more]
KUP_BDEBA6.549e-2129.20Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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