FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_AERHH (Probable potassium transport system protein kup 2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=kup2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 58/226 (25.66%), Postives = 106/226 (46.90%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG    ++I+HTS +  GQIYIP INW L +  + + + F  + ++  A G+AV   M++T+ L   V    WH +            +++   F+A+L K   G W+P+ L  +    M  W     +      ++  S+  +++        RV G  +  + +V+ IP    H + +    H+ ++ L ++   VP+V    R  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLSPIRIVHTSEQESGQIYIPVINWMLYISVVIVIMSFEHSSNLAAAYGIAVTGTMVLTSILSCSVARHSWHWNKYLVAALFVALLAIDVPLFAANLAKIFSGGWLPLTLGAVMFTVMTSWKSERFQLIRRLNEHGNSLEPMIASLEKSPPTRVAGTAVYMSRVVNVIPHALLHNLKHNKVLHERIILLTLRVEEVPYVHNVRRVCI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_SINMW (Probable potassium transport system protein kup 1 OS=Sinorhizobium medicae (strain WSM419) GN=kup1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 67/227 (29.52%), Postives = 106/227 (46.70%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT----LKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR+ I HTS    GQIY+P +N  LM   +A+   F  ++ +  A G++V   M+VTT L    + + W+              ++E ++  A+++K  +G +VPI ++  F+V M+ W  GT     K    D+  +  I  I     +   V V G  +  T      PA   H + +    HQ    L I++   P V  +ER
Sbjct:  306 SQAVITGAFSLTRQAIHLGFLPRMAIFHTSETHTGQIYLPNVNTLLMFGVMALVFIFGSSESLATAYGISVTGAMVVTTVLAFEFLRMRWNWPAWWAAGVLLPLFALELVFLGANMLKIHDGGYVPILIAATFIVIMWTWKRGTAILHTKTRHIDIPLERFIKSIERQSEH-APVSVPGTAIFLTSDPESTPAALLHNIKHNHVLHQQNFILTIRTANTPKVPREER 531          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_VIBCM (Probable potassium transport system protein kup OS=Vibrio cholerae serotype O1 (strain M66-2) GN=kup PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21
Identity = 56/223 (25.11%), Postives = 104/223 (46.64%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q    G  P +KI HTS    GQIY+P  N  L +  + + + FR + ++  A G+AV  +M++++ L+ LV    W                +++L  +++  K +EG W+P+ L  +  + MY+W     +  E    N++S++ ++         R  G  +  +  ++ +P    H +      H+  V +  +   VP V P  R
Sbjct:  300 SQAVISGIFSLARQAINYGYLPPMKIAHTSEHSQGQIYVPAANMLLFVAVIFVMLRFRSSANLAAAYGIAVTAIMMISSLLLVLVARYQWQWRWPRVVTIGIVFIGMDSLLLASTSTKLMEGGWLPLLLGCVVFIVMYIWQQQRQRLLEI-AGNELSVSAMIQSLEEESFQRAAGTAVYLSRSLNHVPRSLLHNIKYNKTLHERNVLMTFQYEAVPRVHPCRR 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_VIBCH (Probable potassium transport system protein kup OS=Vibrio cholerae GN=kup PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21
Identity = 56/223 (25.11%), Postives = 104/223 (46.64%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q    G  P +KI HTS    GQIY+P  N  L +  + + + FR + ++  A G+AV  +M++++ L+ LV    W                +++L  +++  K +EG W+P+ L  +  + MY+W     +  E    N++S++ ++         R  G  +  +  ++ +P    H +      H+  V +  +   VP V P  R
Sbjct:  300 SQAVISGIFSLARQAINYGYLPPMKIAHTSEHSQGQIYVPAANMLLFVAVIFVMLRFRSSANLAAAYGIAVTAIMMISSLLLVLVARYQWQWRWPRVVTIGIVFIGMDSLLLASTSTKLMEGGWLPLLLGCVVFIVMYIWQQQRQRLLEI-AGNELSVSAMIQSLEEESFQRAAGTAVYLSRSLNHVPRSLLHNIKYNKTLHERNVLMTFQYEAVPRVHPCRR 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_CAUCR (Probable potassium transport system protein kup OS=Caulobacter crescentus GN=kup PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21
Identity = 59/223 (26.46%), Postives = 104/223 (46.64%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR+ +  TS    GQI++P++N  L+L  LAI   F+ +  + +A GLAV   M+VTTC+  +V+   W  S            +++  + SA+ ++F  G W+P+ +       M  W  G+    +   ++ + +  ++ +       R  G  +  T      P    H + +    H+  V L +++   P V  +ER
Sbjct:  344 SQAVITGAFSLTQQAIQLGLLPRLDVRRTSETQSGQIFVPQLNTMLLLGVLAIMFTFQTSSALAHAYGLAVTGTMIVTTCMAFIVMRKLWKWSMPMALLFLVPFLALDITFLSANALRFFSGGWLPVLIGAALFTIMATWVRGSQILTDKTRRDSLPVADLMDILRARAPHRAPGTAIFLTSDPDMTPVALMHNLKHNKVLHERNVILTVRTAETPRVSEEER 566          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_CAUCN (Probable potassium transport system protein kup OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=kup PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.553e-21
Identity = 59/223 (26.46%), Postives = 104/223 (46.64%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR+ +  TS    GQI++P++N  L+L  LAI   F+ +  + +A GLAV   M+VTTC+  +V+   W  S            +++  + SA+ ++F  G W+P+ +       M  W  G+    +   ++ + +  ++ +       R  G  +  T      P    H + +    H+  V L +++   P V  +ER
Sbjct:  344 SQAVITGAFSLTQQAIQLGLLPRLDVRRTSETQSGQIFVPQLNTMLLLGVLAIMFTFQTSSALAHAYGLAVTGTMIVTTCMAFIVMRKLWKWSMPMALLFLVPFLALDITFLSANALRFFSGGWLPVLIGAALFTIMATWVRGSQILTDKTRRDSLPVADLMDILRARAPHRAPGTAIFLTSDPDMTPVALMHNLKHNKVLHERNVILTVRTAETPRVSEEER 566          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_VIBC3 (Probable potassium transport system protein kup OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=kup PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.117e-20
Identity = 56/223 (25.11%), Postives = 103/223 (46.19%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q    G  P +KI HTS    GQIY+P  N  L +  + + + FR + ++  A G+AV  +M++++ L+ LV    W                ++ L  +++  K +EG W+P+ L  +  + MY+W     +  E    N++S++ ++         R  G  +  +  ++ +P    H +      H+  V +  +   VP V P  R
Sbjct:  300 SQAVISGIFSLARQAINYGYLPPMKIAHTSEHSQGQIYVPAANMLLFVAVIFVMLRFRSSANLAAAYGIAVTAIMMISSLLLVLVARYQWQWRWPRVVTIGIAFIGMDTLLLASTSTKLMEGGWLPLLLGCVVFIVMYIWQQQRQRLLEI-AGNELSVSAMIQSLEEESFQRAAGTAVYLSRSLNHVPRSLLHNIKYNKTLHERNVLMTFQYEAVPRVHPCRR 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PELLD (Probable potassium transport system protein kup OS=Pelodictyon luteolum (strain DSM 273) GN=kup PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20
Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG 432
            SQA+IT  FS+ +Q   LG  PR+ + HTS++  GQIY+P  NW+LM+  + I   F  +  +  A G+AV   ML++T L   +    W  +            +++  +F AS+ K   GAWVP+A++ +    M  W  G
Sbjct:  322 SQALITGVFSLTQQAIQLGYLPRLTVTHTSARHMGQIYVPAANWSLMVGTIGIVAWFGSSSKLAAAYGVAVTATMLISTILFYYIARDLWKWNPAALNVMITFFAAIDLSFFGASMSKLFHGAWVPLAVALVMFTIMNTWKQG 464          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_RHIL3 (Probable potassium transport system protein kup 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=kup2 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20
Identity = 63/226 (27.88%), Postives = 109/226 (48.23%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSI-NWILSL--GPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +    LG  PR++I  TS    GQIY+P +N  L++  L +   F D++ +  A G++V   M+++T L    +   W  S             +E L+ +A+L+K  +G WVP+AL+   ++ M+ W  G          N++ + ++I S+    +   V V G  +  T +    P +  H + +    H+  V L + +   P+V PD R
Sbjct:  309 SQAVITGAFSLARSAVHLGFLPRLRIKFTSETNTGQIYVPSVNLLLLVGVLMLISSFGDSESLATAYGISVTGTMVISTMLAFQFLRAVWGYSLVVAAVLLLPLFIIEVLFLAANLLKIHDGGWVPVALALAIMIMMWTWTRGQAYLKRLRANNEIPLDSFIRSIERKSDHSPVTVPGTAVFLTSVPDRTPNVLLHNLKHNHVLHEQNVILTVWTEDEPYV-PDSR 533          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK1_DEBOC (High affinity potassium transporter OS=Debaryomyces occidentalis GN=HAK1 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.459e-20
Identity = 52/158 (32.91%), Postives = 83/158 (52.53%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSI 477
            SQA+I   FSI  Q   L CFP  KIIH S K  G++YIP INW LM+   A T GF+++ ++  A GL +    LVT+ L+ + +   ++ +             +E +   ++L K   GAW P+ +S IF++ +  W +   +K   D + ++ I
Sbjct:  399 SQALILGVFSITSQLINLDCFPNFKIIHVSKKYAGKVYIPAINWLLMIGVCATTAGFKNSNNVTAAYGLGITLDFLVTSSLIMVCMTYVYNWNILIPITYALIFLPLEVIMVISNLKKITHGAWFPLMMSGIFMMFLSFWRWARSRKVNQDFKTRIRI 556          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP2_AERHH6.549e-2125.66Probable potassium transport system protein kup 2 ... [more]
KUP1_SINMW6.549e-2129.52Probable potassium transport system protein kup 1 ... [more]
KUP_VIBCM8.553e-2125.11Probable potassium transport system protein kup OS... [more]
KUP_VIBCH8.553e-2125.11Probable potassium transport system protein kup OS... [more]
KUP_CAUCR8.553e-2126.46Probable potassium transport system protein kup OS... [more]
KUP_CAUCN8.553e-2126.46Probable potassium transport system protein kup OS... [more]
KUP_VIBC31.117e-2025.11Probable potassium transport system protein kup OS... [more]
KUP_PELLD1.459e-2033.57Probable potassium transport system protein kup OS... [more]
KUP2_RHIL31.459e-2027.88Probable potassium transport system protein kup 2 ... [more]
HAK1_DEBOC1.459e-2032.91High affinity potassium transporter OS=Debaryomyce... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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