FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PSE14 (Probable potassium transport system protein kup OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=kup PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 64/223 (28.70%), Postives = 101/223 (45.29%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+  Q   LG  PR+ I HTSS   GQIYI  +NW LM   + + +GF  +  + +A G+AV   ML TT L+S V+++ W                V+ L+F+A++ K  +G   P+    +  + M  W  G     E   +  + +   +S        RV+G  +  T     +P    H + +    H+ VV L +     P V   +R
Sbjct:  310 SQAVISGAFSMTLQAIQLGYIPRMHIQHTSSDAQGQIYIGAVNWALMAGVILLVIGFESSGALASAYGVAVTGTMLCTTILVSTVMLMLWKWPPLLAVPLLICLLLVDGLFFAANVPKIFQGGAFPVLAGAVLFILMTTWKRGKQLLAERIDEGGLPLPIFISSIRVQPPHRVQGTAVFLTARSDAVPHALLHNMLHNQVLHEQVVLLTVVYEDSPRVPAAQR 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_AERS4 (Probable potassium transport system protein kup OS=Aeromonas salmonicida (strain A449) GN=kup PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 58/226 (25.66%), Postives = 105/226 (46.46%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG    ++I+HTS +  GQIYIP INW L +  + + + F  + ++  A G+AV   M++T+ L   V    WH              +++   F+A+L K   G W+P+ L  +    M  W     +      ++  S+  +++        RV G  +  + +V+ IP    H + +    H+ ++ L ++   VP+V    R  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLSPIRIVHTSEQESGQIYIPVINWILYISVVIVIMSFEHSSNLAAAYGIAVTGTMVLTSILFCSVAKNSWHWPTYLVAALFALLLAIDVPLFAANLGKIFSGGWLPLTLGAVMFTLMTSWKSERFQLIRRLNEHGNSLEPMIASLEKSPPTRVAGTAVYMSRVVNVIPHALLHNLKHNKVLHERIILLTLRVEDVPYVHNVRRVCI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_RHOFD (Probable potassium transport system protein kup 2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=kup2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 64/227 (28.19%), Postives = 105/227 (46.26%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG-TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  +S+ KQ   LG  PR+++ +TS+K  GQIY+PE+NW L++  L   VGF  +  + +A G+AV   ML+TT L   V+   W               +++ L   +  +KF +G W P+ L  +    M  W  G  L        +   + +I +L  ++ + RV    +        +P    H + +    H+  V L +    VP +  DER  V
Sbjct:  304 SQAVISGAYSMTKQAVLLGLLPRMQVQYTSAKEIGQIYMPEVNWLLLISVLLAVVGFGSSSALASAYGIAVTMTMLITTALTFFVVRDGWGYPLPVALAATAVFLALDTLLVVSCSLKFFQGGWFPLVLGLVIFTVMATWRRGRELLIDNIRHDDPELLPFITALSADV-VHRVPRTAVYTVANPDTVPQALMHNLKHNQVLHERNVILTVVFHDVPWIAFDERVQV 529          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_POLSJ (Probable potassium transport system protein kup 2 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=kup2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 66/226 (29.20%), Postives = 102/226 (45.13%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ KQ   +G  PR+ I HTS K  GQIYI  +NW+L +  +   V FR + ++  A G+AV   ML+TT L   VI   W+               V+  +F+++L+K   G W P+ +       M  W  G      K   D  +  S    + + P     RV G  +  T     +P    H + +    HQ  +F+ ++   VP +  ++R
Sbjct:  301 SQAMITGAFSVTKQAVQMGYLPRLNIQHTSVKDTGQIYITFVNWSLFVAIVLAVVMFRSSSNLAAAYGIAVTLDMLITTTLTFFVIRYSWNYPLSLCIAATGVFFLVDLAFFASNLMKLFAGGWFPLLIGGAVFTLMMTWKEGRGLLNDKLRSDAIDLPSFLDAVFVSPP---ARVEGTAVFLTAEPGTVPNAMLHNLKHNKVLHQQNLFVTVRYHEVPWIGMNKR 523          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RHIME (Probable potassium transport system protein kup 1 OS=Rhizobium meliloti GN=kup1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 67/230 (29.13%), Postives = 105/230 (45.65%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT----LKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FS+ +Q   LG  PR+ I HTS    GQIY+P +N  LM   +A+   F  ++ +  A G++V   M+VTT L    + + W+               +E ++  A+++K  +G +VPI ++  F+V M+ W  GT     K    D+     I  +     +   V V G  +  T      PA   H + +    HQ    L I++   P V  +ER  V
Sbjct:  298 SQAVITGAFSLTRQAIHLGFLPRMAIFHTSETHTGQIYLPNVNTLLMFGVMALVFLFGSSEALATAYGISVTGAMVVTTVLSFEFLRMRWNWPTWWAAGALLPLFVLEFVFLGANMLKIHDGGYVPILIAATFIVIMWTWKRGTAILHAKTRHIDIPLASFIKSVERQSEH-APVSVTGTAIFLTSDPESTPAALLHNIKHNHVLHQQNFILTIRTANTPKVPKEERVSV 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_CORGL (Probable potassium transport system protein kup OS=Corynebacterium glutamicum GN=kup PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.489e-20
Identity = 61/226 (26.99%), Postives = 113/226 (50.00%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWI---LSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ KQ   L   PR+ I HTS K  GQIY+P +N  L +  + + + FR ++ + +A GLAV      T  L+S++ ++  H +           G  E L F+++  K  +G W+P+ ++ + +V M  W +G+ +  +   + ++ ++     L    N+G+ +V  + +        +P      V +L   ++ +V + I    VPHV P+ER
Sbjct:  306 SQAVISGAYSLTKQAVNLKLLPRMVIRHTSRKEEGQIYMPLVNGLLFVSVMVVVLVFRSSESLASAYGLAVTG----TLVLVSVLYLIYVHTTWWKTALFIVLIGIPEVLLFASNTTKIHDGGWLPLLIAAVLIVVMRTWEWGSDRVNQERAELELPMDKFLEKLDQPHNIGLRKVAEVAVFPHGTSDTVPLSLVRCVKDLKLLYREIVIVRIVQEHVPHVPPEER 527          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_CHLTE (Probable potassium transport system protein kup OS=Chlorobium tepidum GN=kup PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.250e-20
Identity = 61/218 (27.98%), Postives = 95/218 (43.58%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHV 657
            SQA+IT  FS+ +Q   LG  PR+ + HTS+   GQIY+P  NW LM   +A+  GF  +  + +A G+AV   ML++  L   V    W+ +             ++  +F AS+ K   GAW P+ + F     M  W  G L   +      ++++            RV+G  +  T     +P    H + +    H  V  L   +  VP V
Sbjct:  292 SQALITGIFSLTQQGIQLGYIPRLTVQHTSASHIGQIYVPAANWALMFSTIALVAGFGSSSKLASAYGVAVTATMLISAVLFYYVARDLWNWNRLGLNLLMGMFMLIDLSFFGASVSKLFHGAWFPLVIGFALFTLMLTWKQGRLLLMKQIQDRTLTVSEFTESLAIQQPQRVKGQAIYLTANPDVVPMALLHNMRHNKILHSEVGLLHFSTERVPRV 509          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PROVI (Probable potassium transport system protein kup OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=kup PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.245e-20
Identity = 61/218 (27.98%), Postives = 91/218 (41.74%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHV 657
            SQA+IT  +SI +Q   LG  PR+ + HTS+   GQIY+P  NW LM   + + +GF  +  +  A G ++ T ML++T L   V    W                V+  +F AS+ K   GAW P+A+  +    M  W  G            ++++  L         RV G  +  T     +P    H + +    H  V      S  VP V
Sbjct:  320 SQALITGVYSITQQAMQLGYLPRLTVTHTSASHIGQIYVPAANWALMAATIGLVLGFGSSSRLAAAYGASMTTTMLISTILFFFVARDLWKWRPPVLWALVSLFAVVDLSFFGASMSKLFHGAWFPLAVGLLMFTLMNTWKQGRRLLMRQLQDRTLTVDGFLDSLALQEPQRVPGQAVYLTANPDIVPIALLHNLRHNKVLHSEVALFHFSSERVPRV 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_SHIDS (Low affinity potassium transport system protein kup OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=kup PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20
Identity = 59/220 (26.82%), Postives = 106/220 (48.18%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTL--MLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHV 657
            SQA+I+  F + +Q   LG    ++IIHTS    GQIYIP +NW L   ++ + + V F  + ++  A G+AV   M++T+ L + V    WH +             V+   F+A+L K L G W+P++L  +  + M  W     +      ++  S+  +++       VRV G  +  +  ++ IP    H + +    H+ V+ L +++   P+V
Sbjct:  301 SQAVISGVFLLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTEVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYV 520          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_CHLPD (Probable potassium transport system protein kup OS=Chlorobium phaeobacteroides (strain DSM 266) GN=kup PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG 432
            SQA+IT  FS+ +Q   LG  PR+ + HTS+   GQIY+P  NW LM   + + +GF  +  +  A G+AV   ML++T L   V    W  +             ++  +F AS  K   GAW P+ +  +    M  W  G
Sbjct:  316 SQALITGVFSLTQQAIQLGYLPRITVKHTSAGHRGQIYVPGANWALMYATIGLVIGFGSSSKLAAAYGVAVTATMLISTILFYYVARDIWRWNKLATNLLVSFFFVIDLAFFGASATKLFHGAWFPLVIGLVLFTLMLTWKQG 458          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP_PSE141.905e-2028.70Probable potassium transport system protein kup OS... [more]
KUP_AERS41.905e-2025.66Probable potassium transport system protein kup OS... [more]
KUP2_RHOFD1.905e-2028.19Probable potassium transport system protein kup 2 ... [more]
KUP2_POLSJ1.905e-2029.20Probable potassium transport system protein kup 2 ... [more]
KUP1_RHIME1.905e-2029.13Probable potassium transport system protein kup 1 ... [more]
KUP_CORGL2.489e-2026.99Probable potassium transport system protein kup OS... [more]
KUP_CHLTE3.250e-2027.98Probable potassium transport system protein kup OS... [more]
KUP_PROVI4.245e-2027.98Probable potassium transport system protein kup OS... [more]
KUP_SHIDS9.457e-2026.82Low affinity potassium transport system protein ku... [more]
KUP_CHLPD9.457e-2032.87Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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