FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_LACPL (Probable potassium transport system protein kup 2 OS=Lactobacillus plantarum GN=kup2 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 51/155 (32.90%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNK 468
            SQA+IT +++++ +   L   PR+ I H S+ +  QIYI  INW L L+ L I   F+ + HM  A GLA+   ML+TT L+S  I +  H++           G++E ++ +ASL KF+ G ++ + L+ +  + M VW +G  ++  ++  N+
Sbjct:  310 SQALITGSYTLVDEAVGLKFLPRMIIKHPSN-VRSQIYIGAINWLLCLVTLGIVWLFQTSAHMEAAYGLAITLTMLMTTILLSQWIHMKGHRA--LALALLFGFGALETVFLTASLTKFIHGGYLTLGLTLVIFLIMVVWFFGNRRRLRYNQANE 461          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_SPHWW (Probable potassium transport system protein kup 1 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=kup1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 59/223 (26.46%), Postives = 101/223 (45.29%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   LG  PR+KI  TS    GQIY+P I   L +  + + +GF  +  M  A G++V   M+VTTCL  LV+   W                ++  +F A++++  EG WVP+ ++    + +  W  G       D    + +  +  +       RV G+ +  +  +   P+   H + +    H+  + L I +V  P V   +R
Sbjct:  326 SQAVITGAYSLTRQAIQLGLLPRLKIRQTSEHAAGQIYLPTITMLLFVGVMVLVLGFGSSSAMAAAYGVSVSGTMVVTTCLAFLVVRRSWGWGWPLTVAVIVPLLLLDLFFFGANILRIYEGGWVPLIVAGGVGLLIVTWVRGRKLLLAIDQSQAIELEELARMLRARPPERVPGMAIFLSSGMEAAPSALLHNLKHNKILHERNLALTINTVNQPAVPAAQR 548          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP3_RHIEC (Probable potassium transport system protein kup 3 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=kup3 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.783e-18
Identity = 59/229 (25.76%), Postives = 106/229 (46.29%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSL---GPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FS+++Q   LG  PR++I+ TS    GQI++P +N  L +  + + + F+ +  +  A G++V   M+VT+ +    +   W+ S             +E ++  A+L+K  +G ++PI ++  F V M+ W  GT    E      + +   +S      +    +V G  +  T      PA   H + +    H   V L I++   P V   +RF +
Sbjct:  308 SQAVITGAFSMVRQGINLGFLPRMEILFTSETNTGQIFVPSVNAVLFIGVIFLVLSFKTSDALATAYGISVTGAMVVTSIMAFEFVRARWNWSLPLAVVALAPLVVLELIFLGANLLKIHDGGYIPILIATAFTVIMWTWRRGTAILMEKTRHTDIPLPSFVSAIERKSDHSPAQVPGTAIFLTSDPESAPAALLHNLKHNHVLHDRNVILTIRTANKPRVLNQDRFRI 536          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_LACCB (Probable potassium transport system protein kup OS=Lactobacillus casei (strain BL23) GN=kup PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG 432
            SQA+I+ +++++ +   L   PR+ II+ + ++ GQ+YIP +N  L L CLAI   F+ +  M  A GLA+   ML+TT L+    +   H              ++E ++F +S +KFL G +V   ++FI L  MYVW YG
Sbjct:  317 SQALISGSYTLVSEAIKLRFLPRLHIIYPT-RLKGQLYIPVVNTILWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLL-YQYLRSRHAPAVIAIGTLIFFSAIETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYG 457          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_LACC3 (Probable potassium transport system protein kup OS=Lactobacillus casei (strain ATCC 334) GN=kup PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG 432
            SQA+I+ +++++ +   L   PR+ II+ + ++ GQ+YIP +N  L L CLAI   F+ +  M  A GLA+   ML+TT L+    +   H              ++E ++F +S +KFL G +V   ++FI L  MYVW YG
Sbjct:  317 SQALISGSYTLVSEAIKLRFLPRLHIIYPT-RLKGQLYIPVVNTILWLACLAIIGYFKTSAEMEGAYGLAITITMLMTTLLL-YQYLRSRHAPAVVAIGTLIFFSAIETVFFISSAVKFLHGGYVTAMIAFIILAVMYVWQYG 457          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_AZOC5 (Probable potassium transport system protein kup OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=kup PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 47/143 (32.87%), Postives = 74/143 (51.75%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG 432
            SQ+IIT  FS+ KQ   LG  P ++I +TS      IY+  +NW LM+ C+A+ +GF  +  + +A G+AV   M+ T+ L    +   W               S++A + SA+L K  EG W+P+ ++ I +  M  W  G
Sbjct:  307 SQSIITGVFSLAKQAIELGYLPPMRIRYTSEHNEQHIYVGRLNWLLMVACIAVVLGFEASDRLASAYGIAVAFAMVTTSILFVAQVNRAWKWPKPAVIALGIGLFSLDAAFASANLTKLHEGGWLPLTIAGIVIFVMVSWRRG 449          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RHIEC (Probable potassium transport system protein kup 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=kup1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 60/229 (26.20%), Postives = 105/229 (45.85%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILS---LGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FS+++Q   LG  PR++I+ TS    GQI++P +N  L    + + + F+ +  +  A G++V   M+VT+ +    +   W+ S             +E ++  A+L+K  +G ++PI ++  F V M+ W  GT    E      + +   +S           +V G  +  T      PA   H + +    H   V L I++V  P V   +R+ V
Sbjct:  308 SQAVITGAFSLVRQGINLGFLPRMEILFTSETNTGQIFLPSVNAVLFFGVIFLVLSFKTSDALATAYGISVTGAMVVTSIMAFEFVRARWNWSLPVAVIALAPLVVLEMIFLGANLLKIHDGGYIPILIATAFTVVMWTWRRGTAILMEKTRHTDIPLASFVSSIERKSEHSPAQVPGTAIFLTSDPESAPAALLHNLKHNHVLHDRNVILTIRTVNKPRVPSHDRYKV 536          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_AGRRH (Probable potassium transport system protein kup OS=Agrobacterium rhizogenes GN=kup PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18
Identity = 60/229 (26.20%), Postives = 105/229 (45.85%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILS---LGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FS+++Q   LG  PR +I+ TS    GQI++P +N  L +  + + + F+ +  +  A G++V   M+VT+ +    +   W+ S             +E ++  A+L+K  +G ++PI ++  F V M+ W  GT    E      + +   +S           +V G  +  T      PA   H + +    H   V L I++V  P V   +R+ V
Sbjct:  308 SQAVITGAFSMVRQGINLGFLPRREILFTSETNTGQIFVPSVNAVLFIGVIFLVLSFKTSDALATAYGISVTGAMVVTSIMAFEFVRARWNWSLPVAVIALAPLVILELIFLGANLLKIHDGGYIPILIATAFTVIMWTWRRGTAILMEKTRHTDIPLASFVSSIERKSEHSPAQVPGTAIFLTSDPESAPAALLHNLKHNHVLHDRNVILTIRTVNKPRVPSQDRYKV 536          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_LACSS (Probable potassium transport system protein kup OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=kup PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18
Identity = 45/141 (31.91%), Postives = 82/141 (58.16%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWH 426
            SQA+I+ +++++ +   L   PR+K+ + + K+ GQ+YI  +NW L  +CLA+   F+++ HM  A GLA+   ML+TT L+   +     +            G++E ++F AS  KF+ G +V + ++F+ L  M+VW+
Sbjct:  316 SQALISGSYTLVSEAIKLRLLPRIKVDYPA-KLKGQLYISIVNWILWAVCLAVVFYFKNSAHMEAAYGLAITITMLMTTILLFHYLGR-REKRWFLAYVVLLFFGAIETIFFIASAAKFMHGGYVTVLIAFVILFIMFVWY 454          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_LACGA (Probable potassium transport system protein kup OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=kup PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.510e-17
Identity = 50/154 (32.47%), Postives = 86/154 (55.84%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQN 465
            SQA+IT +F+++ + S L   PR+KII+ S++  GQ++IP IN  L    + I   FR ++HM  A GLA+   ML+TT L+   + L    +           G++E ++  +SL KFL G +V + ++      MY+W++G   + + + +N
Sbjct:  309 SQALITGSFTLVSEASGLKFLPRMKIIYPSTE-QGQLFIPSINKMLCAATIGIVFLFRTSEHMEAAYGLAITVTMLMTTVLLFEYLSL-RKVNLSLRLVFLLLFGAIETMFLISSLAKFLHGGYVTVIIAAFIGAIMYIWYFGNKIRDKREAEN 460          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP2_LACPL1.366e-1832.90Probable potassium transport system protein kup 2 ... [more]
KUP1_SPHWW1.366e-1826.46Probable potassium transport system protein kup 1 ... [more]
KUP3_RHIEC1.783e-1825.76Probable potassium transport system protein kup 3 ... [more]
KUP_LACCB2.329e-1834.97Probable potassium transport system protein kup OS... [more]
KUP_LACC32.329e-1834.97Probable potassium transport system protein kup OS... [more]
KUP_AZOC52.329e-1832.87Probable potassium transport system protein kup OS... [more]
KUP1_RHIEC2.329e-1826.20Probable potassium transport system protein kup 1 ... [more]
KUP_AGRRH3.973e-1826.20Probable potassium transport system protein kup OS... [more]
KUP_LACSS6.777e-1831.91Probable potassium transport system protein kup OS... [more]
KUP_LACGA1.510e-1732.47Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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