FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_LACBA (Probable potassium transport system protein kup OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=kup PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 50/151 (33.11%), Postives = 84/151 (55.63%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFD 456
            SQA+IT +++++ +   L   PR+ I H S+ +  QIYI  INW L L+ L+I   F+ + HM  A GLA+   ML+TT L+S  + +  H+            G +E L+  ASL KF+ G ++ + L+ +  + M VW +G  ++  ++
Sbjct:  310 SQALITGSYTLVDEAVGLKFLPRMIIKHPSN-VRSQIYIGAINWLLCLVTLSIVWLFQTSAHMEAAYGLAITLTMLMTTILLSQWVQMKGHR--FWSLALLAGFGLLETLFLVASLTKFIHGGYLTLGLTLMIFLIMVVWFFGNRRRLRYN 457          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_LACJO (Probable potassium transport system protein kup 2 OS=Lactobacillus johnsonii GN=kup2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 50/154 (32.47%), Postives = 86/154 (55.84%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQN 465
            SQA+IT +F+++ + S L   PR+KII+ S++  GQI+IP IN  L    + I   F+ ++HM  A GLA+   ML+TT L+   + L    +           G++E+++  +SL KFL G +V + ++      MY+W++G   +   + +N
Sbjct:  309 SQALITGSFTLVSEASGLKFLPRMKIIYPSTE-QGQIFIPSINKMLCAATIGIVFLFKTSEHMEAAYGLAITVTMLMTTILLFEYLSL-KKVNILLRLVFLFLFGAIESMFLISSLAKFLHGGYVTVIIAAFIGAIMYIWYFGNKVRDRREAKN 460          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_LACS1 (Probable potassium transport system protein kup OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=kup PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 54/159 (33.96%), Postives = 88/159 (55.35%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT-LKKYEFDVQNKVSI 477
            SQA+IT +F+++++   L   P++K+ H S    GQIYI  INW+L +  L + V FR ++ M  A GLA+   ML+TT L+S    L    +            SVE ++  +SL KF  G +V + ++ + L+ M +W++G  L+ Y  D +  VS+
Sbjct:  307 SQALITGSFTLVEEAVGLKLLPKMKVEHPSLS-RGQIYIRTINWSLCICTLLVLVYFRTSERMEAAYGLAITITMLMTTILLSQ--YLKDKVNVVFNGIFLAVFLSVELIFLISSLTKFTHGGYVTLLITLLILLIMVIWYFGNKLRDYLSDEEEWVSL 462          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_BIFLO (Probable potassium transport system protein kup 2 OS=Bifidobacterium longum GN=kup2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 47/145 (32.41%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXG-SVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT 435
            SQA+IT  F+++ + + L   P +++ + + +  GQ+YIP +N  L +  LA+   F+D++H+  A GLA+   M+ TT L+    V  WH               +++A++F AS+ KFL G W  + L+   L  MY W+ GT
Sbjct:  299 SQALITGAFTMVSEATRLNWMPHLQVRYPA-RTRGQLYIPVVNGVLCVSTLAVLAIFKDSEHISAAYGLALTITMITTTVLLG---VYLWHSGKRVGAIVFTVLFLAIQAMFFIASMAKFLHGGWFTMLLTAAILFVMYTWNEGT 439          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_AGRRK (Probable potassium transport system protein kup OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=kup PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 57/229 (24.89%), Postives = 106/229 (46.29%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILS---LGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT  FS+ +Q   LG  PR++I+ TS    GQI++P +N  L    + + + F+ +  +  A G++V   M+VT+ +    + + W+ +             +E ++  A+L+K  +G +VP+ ++  F V M+ W  G+    E      + ++  +S      +     V G  +  T      PA   H + +    H   V L I++   P V  ++R+ V
Sbjct:  309 SQAVITGAFSLTRQAIHLGFLPRMEILITSETNTGQIFLPSVNAILFFGVIFLVLSFKTSDALATAYGISVTGAMVVTSIMAFEFVRVRWNWTLPMAIAVLTPLLLLEFVFLGANLLKIHDGGYVPVLIATAFTVIMWTWRRGSAILMEKTRHTDIPLSSFVSSIERKSDHSPAHVPGTAIFLTSDPESAPAALLHNLKHNHVLHDKNVILTIRTTNKPRVPQEDRYSV 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BIFAA (Probable potassium transport system protein kup OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=kup PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 46/145 (31.72%), Postives = 80/145 (55.17%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXG-SVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT 435
            SQA+IT  ++++ + + L   P +++ + + +  GQ+YIP +N  L +  L +   FRD++H+  A GLA+   M+ TT L+++ I   WH               +++ L+F AS+ KFL G W  + L+   L+ MY W+ GT
Sbjct:  299 SQALITGAYTMVSEATRLNWMPHLQVRYPA-RTRGQLYIPVVNAVLCVSTLLVLAMFRDSEHISAAYGLALTVTMITTTILLAVYI---WHDGKRVGAVVFTVVFLAIQFLFFFASMAKFLHGGWFTMLLTLAILLIMYTWNEGT 439          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_LACAC (Probable potassium transport system protein kup 2 OS=Lactobacillus acidophilus GN=kup2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQN 465
            SQA+IT +F+++ + S+L   PR+ II+ S++  GQIYIP IN  + ++ +AI   FR + HM  A GLA+   ML+TT L+   +     +              +E ++  +SL KFL G +V + ++   LV MYVW YG   + + + +N
Sbjct:  310 SQALITGSFTLVAEASSLKFLPRMNIIYPSTE-KGQIYIPLINKMICVVTVAIVFLFRTSHHMEAAYGLAITVTMLMTTILLFEYLGKKG-KPLYLRVIFLIAFAFIEGMFLISSLTKFLHGGYVTVLIAGFILVIMYVWFYGNKIRDKREAKN 461          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_STRE4 (Probable potassium transport system protein kup OS=Streptococcus equi subsp. equi (strain 4047) GN=kup PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 46/145 (31.72%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTL 438
            SQA+I+ +F+++ +   L  FP  KI +  + + GQ+YIP INW+L  +     + FR + HM  A GLA+   ML+TT L++  ++                   +E ++F AS +KF+ G +V + L+   +  M +WH GT+
Sbjct:  308 SQALISGSFTLVSEAMRLKIFPLFKITYPGANL-GQLYIPVINWSLFAVTSCTVLYFRTSAHMEAAYGLAITITMLMTTILLAYYLIK-EGVKPLLASLLMAFFAFIEFIFFLASAVKFMHGGYVVVVLALAIVFVMVIWHAGTM 450          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_STRS7 (Probable potassium transport system protein kup OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=kup PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 46/145 (31.72%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTL 438
            SQA+I+ +F+++ +   L  FP  KI +  + + GQ+YIP INW+L  +     + FR + HM  A GLA+   ML+TT L++  ++                   +E ++F AS +KF+ G +V + L+   +  M +WH GT+
Sbjct:  308 SQALISGSFTLVSEAMRLKIFPLFKITYPGANL-GQLYIPVINWSLFAVTSCTVLYFRTSAHMEAAYGLAITITMLMTTILLAYYLIK-EGVKPLLASLLMAFFAFIEFIFFLASAVKFMHGGYVVVVLALAIVFVMVIWHAGTV 450          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_STREM (Probable potassium transport system protein kup OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=kup PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 46/145 (31.72%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTL 438
            SQA+I+ +F+++ +   L  FP  KI +  + + GQ+YIP INW+L  +     + FR + HM  A GLA+   ML+TT L++  ++                   +E ++F AS +KF+ G +V + L+   +  M +WH GT+
Sbjct:  308 SQALISGSFTLVSEAMRLKIFPLFKITYPGANL-GQLYIPVINWSLFAVTSCTVLYFRTSAHMEAAYGLAITITMLMTTILLAYYLIK-EGVKPLLASLLMAFFAFIEFIFFLASAVKFMHGGYVVVVLALAIVFVMVIWHAGTV 450          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP_LACBA1.972e-1733.11Probable potassium transport system protein kup OS... [more]
KUP2_LACJO1.972e-1732.47Probable potassium transport system protein kup 2 ... [more]
KUP_LACS12.575e-1733.96Probable potassium transport system protein kup OS... [more]
KUP2_BIFLO2.575e-1732.41Probable potassium transport system protein kup 2 ... [more]
KUP_AGRRK3.363e-1724.89Probable potassium transport system protein kup OS... [more]
KUP_BIFAA4.393e-1731.72Probable potassium transport system protein kup OS... [more]
KUP2_LACAC4.393e-1734.42Probable potassium transport system protein kup 2 ... [more]
KUP_STRE45.737e-1731.72Probable potassium transport system protein kup OS... [more]
KUP_STRS77.493e-1731.72Probable potassium transport system protein kup OS... [more]
KUP_STREM7.493e-1731.72Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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