FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK21_ORYSJ (Potassium transporter 21 OS=Oryza sativa subsp. japonica GN=HAK21 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.726e-51
Identity = 95/226 (42.04%), Postives = 144/226 (63.72%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            GSQA+I+  F+ +    +L CFPRVKI+HTS +  GQ+YIP +N+ L +    +TV F+ T  +G A  + VI VM++TT LM++V++L W  +            S EA+Y S+ L KF  G +VP+A+S + +V M VWHY  +K+Y++++++ VS + +  +  +  + RVRG+ L +TELV GIP IF H +  +P  H V+VF+ IK +PVPHV   ERFL
Sbjct:  384 GSQAMISCAFATVSHLQSLSCFPRVKILHTSKRFPGQLYIPGVNFLLCVAACVVTVSFKTTVIIGKAHEICVILVMIITTLLMTIVMLLVWKINILWVALFFITFTSTEAVYLSSVLYKFTHGPYVPVAMSVVLMVVMIVWHYVHVKRYKYELEHTVSTDKVKEMLESHDLKRVRGVALFYTELVQGIPPIFPHLIEKIPTIHSVLVFISIKHLPVPHVDTSERFL 609          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK16_ORYSJ (Probable potassium transporter 16 OS=Oryza sativa subsp. japonica GN=HAK16 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.936e-50
Identity = 93/226 (41.15%), Postives = 142/226 (62.83%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            G QA+++  F+ +     L CFPR+KI+HTS +  GQ+Y PE+N+ L LL   IT+ FR T  +  A  + V+ VM++TT LM++V++L W  +            S E +Y SA L KF +G ++P+A+S + +V M+VWHY  +K+Y+F++++ VS N +  L     + RV G+GL +TELV GIP IF H +  +P  H V+VF+ +K +P+PHV   ERFL
Sbjct:  395 GCQAMVSCAFATMSHLQTLNCFPRIKILHTSRRYSGQLYSPEVNFFLCLLSCVITLSFRTTGFIVKAHEICVVLVMVITTILMTIVMLLVWKVNIWWIVLFFVVFMSTETVYLSAVLYKFTKGPYMPLAMSAVLMVIMFVWHYVHVKRYKFELEHTVSPNKVRELLERRDLKRVPGVGLFYTELVQGIPPIFPHLIEKIPTIHSVIVFISMKHLPIPHVDVSERFL 620          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK27_ORYSJ (Potassium transporter 27 OS=Oryza sativa subsp. japonica GN=HAK27 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.552e-49
Identity = 91/226 (40.27%), Postives = 143/226 (63.27%), Query Frame = 1
Query:    1 GSQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            GSQA+I+  F+ I     L CFPRVKI+HTS +  GQ+YIPE+N+ L +    +T+GF+ T  +G A  + V+ VM++TT L+++V++L W  S            S E++Y SA L +F+ G +VP+A+S   ++ M VWHY  +K+YEF++++ V  + +  L     I RV G+GL +T+LV GIP +F H +  +P+ H V++F+ IK +P+P V   ERF+
Sbjct:  391 GSQAMISCAFATISHLQTLNCFPRVKILHTSRQYSGQLYIPEVNFLLCVGACLVTIGFKTTVIIGEAHAICVVFVMIITTLLLTIVMLLVWKVSIWYVALFFIVFMSSESIYLSAVLYQFVHGEYVPVAMSVFLMIVMTVWHYVHVKRYEFELEHTVPRDKVKELLERRDIQRVPGVGLFYTDLVQGIPPVFPHLIEKIPSIHSVLIFVSIKHLPIPSVDRSERFI 616          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK1_ORYSJ (Potassium transporter 1 OS=Oryza sativa subsp. japonica GN=HAK1 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.684e-48
Identity = 90/226 (39.82%), Postives = 142/226 (62.83%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILS-LGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+++  F+I+ +  +LGC PRV++IHTS K  GQ+YIPE+N+ + L  + +T+ FR T  +GNA G+ V+T  +VTT LM++V++L W +            G  E +Y S+ L KF++G ++P   + + +  M  WHY  +++Y +++ + V    + S L  N G+ RV G+GL++TELV GIP +F   V  +P+ H V VF+ IK +P+PHV   ERFL
Sbjct:  394 SQAMLSGAFAILSKALSLGCLPRVRVIHTSKKYEGQVYIPEVNFMMGLASIIVTIAFRTTTSIGNAYGICVVTTFMVTTHLMTVVMLLIWKKHLVFILLFYCVFGFTEVVYLSSILSKFVDGGYLPFCFAMVLMTMMATWHYVHVRRYWYELDHIVPTAELASLLEENGGVRRVPGVGLLYTELVQGIPPLFPRLVRKIPSVHAVFVFISIKHLPIPHVAAAERFL 619          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK19_ORYSJ (Potassium transporter 19 OS=Oryza sativa subsp. japonica GN=HAK19 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.388e-47
Identity = 89/225 (39.56%), Postives = 139/225 (61.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+++  F+I+ +  +LGCFPRV+++HTS+K  GQ+YIPE+N+ +    +A+T+ F+ T ++GNA G+ V+TV  +TT LM++V++L W              G  E LY S+ L KF EG ++P   S + +  M  WHY  +K+Y +++   V      +L     + RV G+GL+++ELV GIP +F   V  +P+ H V VF+ IK +PVP V P ERF+
Sbjct:  374 SQAMLSGAFAILSKALSLGCFPRVEVVHTSNKYEGQVYIPEVNFLIGAASVAVTLAFQTTANIGNAYGICVVTVFSITTHLMTVVMLLIWKVRLPFIAAFYAAFGLAEFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDRVVPAAETTALLARRDVRRVPGVGLLYSELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPVPRVAPAERFI 598          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK20_ORYSJ (Potassium transporter 20 OS=Oryza sativa subsp. japonica GN=HAK20 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.948e-47
Identity = 89/225 (39.56%), Postives = 140/225 (62.22%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+++  F+I+ +   LGCFPRV+++HTS+K  GQ+YIPE+N+ + +  +AITV F+ T ++GNA G+ V+ V  +TT LM++V++L W                 E LY S+ L KF EG ++P   S + +  M  WHY  +K+Y +++ + V  + + +L     + RV G+GL++TELV GIP +F   V  +P+ H V VF+ IK +P+P V P ERF+
Sbjct:  375 SQAMLSGAFAILSKALPLGCFPRVEVVHTSNKYEGQVYIPEVNFLIGVASVAITVAFQTTANIGNAYGICVVMVFSITTHLMTVVMLLIWKVRLPFIAAFYVVFTFTEFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDHIVPPDEMAALLARRDVRRVPGVGLLYTELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPIPRVAPAERFI 599          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK26_ORYSJ (Potassium transporter 26 OS=Oryza sativa subsp. japonica GN=HAK26 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.494e-45
Identity = 91/226 (40.27%), Postives = 142/226 (62.83%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+A+FSII+Q  ALGCFPRV + HTS K  GQ+Y PEIN+ LM+ C+ ITVGF+    +G A G+AVI VML TT LM++V+++ W  +            S+E +Y ++ + K L+G WVP A++  FL+    W YG  KK E+++ N +     +         RV G+ +  T++++GIP I  H+V ++ +  +++VF+ I+ +PV  V P+ERF++
Sbjct:  402 SQALISASFSIIRQSIALGCFPRVTMKHTSGKHEGQVYSPEINYFLMVACILITVGFKGGPEIGQAFGVAVIFVMLFTTNLMTVVMLIIWESNIALASLFFVFFFSIEGIYMTSLMNKILQGGWVPFAITAFFLIITLSWTYGRSKKGEYELANVMEREEFIKTVTTRS--RVPGVCIFCTDMMNGIPPIVRHYVQHVASLRELMVFVTIRVLPVRTVLPEERFII 625          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK17_ORYSJ (Probable potassium transporter 17 OS=Oryza sativa subsp. japonica GN=HAK17 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 9.391e-44
Identity = 85/226 (37.61%), Postives = 136/226 (60.18%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQ++I+ATFS+IKQ   L  FPRVK++HTS    G++Y PEIN+ LM+LC+ + +GF   K +GNA G+ VI VML+TT L++LV+++ W                +E  Y SA   K  EG W+P A+S    + M+ W+YG  +K+E+++ NKVS+  +  L     + RV G+   ++ +  G+  I SH++ N+ + H V +F+ ++S+ V  V   +R L+
Sbjct:  360 SQSLISATFSVIKQSVVLDYFPRVKVVHTSQHKEGEVYSPEINYILMVLCVGVILGFGGGKAIGNAFGVVVIMVMLITTVLLTLVMIIIWRTPLVLAGLYFVPFFIMEGAYVSAVFTKIPEGGWLPFAVSITLAMIMFGWYYGRQRKFEYEMTNKVSLEHLGELLARPEVQRVPGLCFFYSNIQDGLTPILSHYIKNMSSLHTVTIFVTLRSLLVAKVDQSKRILI 585          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK6_ORYSJ (Potassium transporter 6 OS=Oryza sativa subsp. japonica GN=HAK6 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.153e-42
Identity = 91/230 (39.57%), Postives = 138/230 (60.00%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIV----RVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQ++I+A++SII+Q  ALGCFPR  + HTS K  GQ+Y PEIN+ LM++C+ ITVGF+    +G A G+AVI VML+TT LM++V+V+ W  +            ++E  Y ++ + K  +G WVP A++  FL     W YG  KK E++ ++ V        G   GIV    RV G+ L  T+L+ G+P I  H+  N  +  ++++F+  +++PV  V   ERFLV
Sbjct:  403 SQSLISASYSIIRQSIALGCFPRTTVKHTSDKYEGQVYCPEINYVLMVVCVLITVGFQGGPEIGRAFGVAVIWVMLLTTTLMTVVMVVIWEVNGALAGGFFVFYLAIEGTYMTSLMTKVPQGGWVPFAITVAFLSVTLSWTYGRKKKREYEARHAVGD------GEFAGIVSRSARVPGMCLFCTDLMDGVPPIVRHYAANTGSLRELLLFVTFRTLPVRTVLAGERFLV 626          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: HAK4_ORYSJ (Probable potassium transporter 4 OS=Oryza sativa subsp. japonica GN=HAK4 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.441e-41
Identity = 86/225 (38.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSG--IPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQ++I+ATFS+IKQ   L  FPRVK++HTS    G++Y PE N+ LMLLC+ + +GF D K +GNA G+ VI VML+TT L++LV+++ W                +EA Y SA   K L G WVP A+S      M+ W+YG  +K E++  NKV++  +  L    G+ RV G+   ++    G  +  + +H++ N+ + H+V VFL ++ + V  V   +R
Sbjct:  355 SQSLISATFSVIKQSVVLDYFPRVKVVHTSKDKEGEVYSPETNYMLMLLCVGVILGFGDGKDIGNAFGVVVILVMLITTILLTLVMLIIWGTHVVLVALYLVPFLLLEATYVSAVCTKILRGGWVPFAVSVALAAVMFGWYYGRQRKTEYEAANKVTLERLGELLSGPGLRRVPGLCFFYSNRQDGGWLTPVLAHYIRNMRSLHEVTVFLTLRYLLVAKVDGKDR 579          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
HAK21_ORYSJ2.726e-5142.04Potassium transporter 21 OS=Oryza sativa subsp. ja... [more]
HAK16_ORYSJ3.936e-5041.15Probable potassium transporter 16 OS=Oryza sativa ... [more]
HAK27_ORYSJ2.552e-4940.27Potassium transporter 27 OS=Oryza sativa subsp. ja... [more]
HAK1_ORYSJ3.684e-4839.82Potassium transporter 1 OS=Oryza sativa subsp. jap... [more]
HAK19_ORYSJ2.388e-4739.56Potassium transporter 19 OS=Oryza sativa subsp. ja... [more]
HAK20_ORYSJ6.948e-4739.56Potassium transporter 20 OS=Oryza sativa subsp. ja... [more]
HAK26_ORYSJ8.494e-4540.27Potassium transporter 26 OS=Oryza sativa subsp. ja... [more]
HAK17_ORYSJ9.391e-4437.61Probable potassium transporter 17 OS=Oryza sativa ... [more]
HAK6_ORYSJ5.153e-4239.57Potassium transporter 6 OS=Oryza sativa subsp. jap... [more]
HAK4_ORYSJ7.441e-4138.22Probable potassium transporter 4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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