FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_CHRVO (Probable potassium transport system protein kup 1 OS=Chromobacterium violaceum GN=kup1 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33
Identity = 74/217 (34.10%), Postives = 119/217 (54.84%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWIL-SLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVP 651
            SQA+ITA FS+  Q + LG FPRVK++HTS    GQIY+P +NWTLML  +A+ +GFR++  +  A GLAV T M +TT L +++    WH              +++  ++ A+ +KFL+G W+P+ L       M  W  G   +       ++ +  +L SLG N  + R+ G+G+  +E   G P +  H + +  A H+  + L ++ + VP
Sbjct:  317 SQALITAVFSLTHQSAQLGFFPRVKVLHTSGSHKGQIYLPLLNWTLMLATIAVVLGFRESGKLAAAFGLAVSTTMAITTVLFAVLARRRWHWPWWAVALVAGSLFAIDLAFWLANALKFLDGGWLPLLLGLAVFCVMGCWFGGRRLQMRESRGRQLPLEALLSSLGMN-PVARIPGVGVFLSERADGTPLVLLHHLKHNQALHETAILLTLQMLDVP 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_RHOPS (Probable potassium transport system protein kup 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=kup2 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.077e-31
Identity = 73/224 (32.59%), Postives = 118/224 (52.68%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWIL-SLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PR+ I+HTS +  GQIY+P  NWTL L  +A+ VGF+ + ++  A G+AV + M++ T L+S V+ L W  +            +V+  +FSA++IK  +G W P+ + FI    +  W  G     +   +  V ++ +L +LGPN  + R RG  +  T    G+P    H + +    HQ VV   + +   P+V   ER
Sbjct:  300 SQAVISGAYSVARQAIQLGLLPRMTIVHTSGEEAGQIYVPFTNWTLYLAVMALVVGFQSSSNLAAAYGIAVTSTMMIDTILVSFVMALLWRWNMALVITVVGTLLAVDIAFFSANIIKVAQGGWFPLFIGFISFTVLTTWRRGRALVRKQLKKQAVPLDVVLRALGPN--VSRARGTAVFLTAATDGVPPALLHNLKHNQTVHQRVVLTTVTTAETPYVPDSER 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_RHOP2 (Probable potassium transport system protein kup OS=Rhodopseudomonas palustris (strain HaA2) GN=kup PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.117e-31
Identity = 72/224 (32.14%), Postives = 115/224 (51.34%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWIL-SLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   LG  PR+ I+HTS +  GQIY+P  NWTL    +A+ +GF+ + ++  A G+AV   M++ T L+S V+ L W  +             V+  YF+A++IK  +G W P+ + FI    +  W  G     +   +  V ++ +L +LGPN  + R RG  +  T    G+P    H + +    HQ VV   + +   P+V   ER
Sbjct:  300 SQAVISGAFSVARQAIQLGLLPRMTIVHTSGEEAGQIYVPFTNWTLYFAVMALVIGFQSSSNLAAAYGIAVTGTMMIDTILVSFVMALLWRWNMALVIVVAGTLLLVDFAYFAANIIKVAQGGWFPLFIGFISFTVLTTWRRGRALVRKQLKKQAVPLDVVLRALGPN--VSRARGTAVFLTAATDGVPPALLHNLKHNQTVHQRVVLATVTTAETPYVPDSER 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_POLSQ (Probable potassium transport system protein kup OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=kup PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30
Identity = 70/223 (31.39%), Postives = 117/223 (52.47%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+  Q   LG  PR+K+ HTS +  GQIY+P +NWTL+ L + + + F+ ++++  A G+AV T M+VTT L ++V+ + W  +            +V+  + +A+L+K +EG W P+ L  I  + +  W+ G     +  V N + +   +         RV G  L  T  V  +P  F H + +    H+ V FL +    VP+V+ +ER
Sbjct:  325 SQAVISGAFSMTSQAILLGFVPRMKVRHTSDREIGQIYMPFVNWTLLFLVIVVVLAFKKSENLAAAYGIAVTTTMIVTTLLAAIVMRVVWRWNTILVTLVIGAFLTVDLAFLTANLLKIMEGGWFPLLLGAICFLFLMTWYQGRKLLRQNAVNNGIELKGFIDALMQHPPHRVEGTALFLTAHVDYVPVSFLHNLKHNHVLHERVFFLKVSIWDVPYVKDEER 547          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RHOPA (Probable potassium transport system protein kup 1 OS=Rhodopseudomonas palustris GN=kup1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29
Identity = 69/224 (30.80%), Postives = 113/224 (50.45%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWIL-SLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PR+ I+HTS +  GQIY+P  NWTL    +A+ VGF+ + ++  A G+AV   M++ T L+S V  L W                ++  +F+A++IK  +G W P+ + FI    +  W  G     +   +  V ++ +L +LGPN  + R RG  +  T    G+P    H + +    HQ V+   + +   P+V   ER
Sbjct:  300 SQAVISGAYSVARQAIQLGLLPRMTIVHTSGEEAGQIYVPFTNWTLYFAVMALVVGFQSSSNLAAAYGIAVTGTMMIDTILVSFVAALLWRWHPVVVAVVIGTLLLLDFAFFAANIIKVAQGGWFPLFIGFISFTVLTTWRRGRALVRKQLKKQAVPLDVVLRALGPN--VSRARGTAVFLTAATDGVPPALLHNLKHNQTVHQRVILTTVSTAETPYVPDSER 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP3_LEGPL (Probable potassium transport system protein kup 3 OS=Legionella pneumophila (strain Lens) GN=kup3 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.003e-29
Identity = 72/226 (31.86%), Postives = 114/226 (50.44%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQAIIT  FS+ +Q   LG  PR+++  TSS+ +GQIYI  +NW LML  L +T+GF  ++ +  A G+AV   ML TT L+ + +   W  +             V+A +F+A+L KF+ G ++PI L+ I    MY+WH G         +  ++++  L      G+VRV    +  T     IP I    V         V+ L I ++ +P  +P ++  +
Sbjct:  307 SQAIITGAFSMTRQAMQLGWLPRLRVTQTSSEGYGQIYIGVVNWFLMLATLGLTIGFGSSEKLAAAYGIAVSATMLCTTVLLFIALHKLWKWNIITSGLVAGLFMIVDASFFAANLTKFINGGYIPITLAIIIYSMMYIWHKGYKTIAIKQKEKNITVDSFLDSIQKEGVVRVPKTAVFLTSKEQDIPPILVWHVKKNRVLQDKVIILNINNLSIPWCKPADQLQI 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_SPHWW (Probable potassium transport system protein kup 2 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=kup2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29
Identity = 68/223 (30.49%), Postives = 110/223 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR++I HTS+   GQIYIP INW LM++ + + + FR + ++  A G+AV   M + TCL+++V++  W  +            +V+  YF A+L K  +G W P+ + FI    +  W  G +       +  + +   +    N   VRV G  +  T    G+P    H + +    H+ V+ L +K    P+V    R
Sbjct:  324 SQAVITGAFSVTQQAIQLGFIPRLRITHTSAGSIGQIYIPAINWGLMVMVILLVMSFRTSSNLAAAYGIAVTGAMAIDTCLIAVVLIHLWGWNKALAAPLIAVFAAVDIAYFGANLTKVPDGGWFPLLIGFIAFTLLTTWGRGRMLMINRLREAAMPVKVFVQSAVN-SAVRVPGTAVFMTSQAQGVPHALLHNLKHNKVLHERVILLTVKIADAPYVPESHR 545          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP3_LEGPH (Probable potassium transport system protein kup 3 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=kup3 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.456e-28
Identity = 72/226 (31.86%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQAIIT  FS+ +Q   LG  PR+++  TSS+ +GQIYI  +NW LML  L +T+GF  ++ +  A G+AV   ML TT L+ + +   W                V+A +F+A+L KF+ G ++PI L+ I    MY+WH G         +  +++   L       +VRV    +  T     IP I    V         V+ L I ++ +P  +P +R  +
Sbjct:  307 SQAIITGAFSMTRQAMQLGWLPRLRVTQTSSEGYGQIYIGVVNWLLMLATLGLTIGFGSSEKLAAAYGIAVSATMLCTTLLLFIALHKLWKWDIITSGLVAGLFMIVDASFFAANLTKFINGGYIPITLAIIIYSMMYIWHKGYQTIAIKQKEKNITVASFLDSIQKERVVRVPKTAVFLTSKEQDIPPILVWHVKKNHVLQDKVIILKINNLSIPRCKPGDRLQI 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_SPHAL (Probable potassium transport system protein kup OS=Sphingopyxis alaskensis GN=kup PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28
Identity = 68/218 (31.19%), Postives = 105/218 (48.17%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHV 657
            SQA+I+  FS+ +Q   LG  PR+++ HTS+   GQIYIP +NW LM++ + + +GF  + ++  A G+AV   M + TCLMS+V+   W                V+  YF A+LIK  +G WVP+ +       +  W  G     E   +  + I   +    N    RV G  +  T    G+P    H + +    H+ ++ L IK   VP V
Sbjct:  333 SQAVISGAFSLTQQAIQLGFMPRLRVEHTSASAAGQIYIPIVNWGLMVMVILLVLGFGSSSNLAAAYGIAVTGAMFIDTCLMSVVLFTLWKWPAWKALPVLAVFFIVDIAYFGANLIKVPDGGWVPLVIGLTIFTLLTTWSRGRKLMQEEMAEGAMPIPIFVKSAAN-SATRVPGTAVFMTSSSDGVPHALLHNLKHNKVLHERIILLTIKIADVPFV 549          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP3_LEGPA (Probable potassium transport system protein kup 3 OS=Legionella pneumophila (strain Paris) GN=kup3 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28
Identity = 70/226 (30.97%), Postives = 112/226 (49.56%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQAIIT  FS+ +Q   LG  PR+++  TSS+ +GQIYI  +NW LML  L + +GF  ++ +  A G+AV   ML TT L+ + +   W  +             V+A +F+A+L KF+ G ++PI L+ I    MY+WH G         +  ++++  L      G+VRV    +  T     IP      V         V+ L I ++ +P  +P ++  +
Sbjct:  307 SQAIITGAFSMTRQAMQLGWLPRLRVTQTSSEGYGQIYIGVVNWLLMLATLGLIIGFGSSEKLAAAYGIAVSATMLCTTVLLFIALHKLWKWNIITSGLVAGLFMIVDASFFAANLTKFINGGYIPITLAIIIYSMMYIWHKGYKTIAIKQKEKNITVDSFLDSIQKEGVVRVSKTAVFLTSKEQDIPPTLVWHVKKNHVLQDKVIILNINNLSIPWCKPGDQLQI 532          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP1_CHRVO5.711e-3334.10Probable potassium transport system protein kup 1 ... [more]
KUP2_RHOPS1.077e-3132.59Probable potassium transport system protein kup 2 ... [more]
KUP_RHOP29.117e-3132.14Probable potassium transport system protein kup OS... [more]
KUP_POLSQ5.910e-3031.39Probable potassium transport system protein kup OS... [more]
KUP1_RHOPA2.933e-2930.80Probable potassium transport system protein kup 1 ... [more]
KUP3_LEGPL5.003e-2931.86Probable potassium transport system protein kup 3 ... [more]
KUP2_SPHWW8.533e-2930.49Probable potassium transport system protein kup 2 ... [more]
KUP3_LEGPH1.456e-2831.86Probable potassium transport system protein kup 3 ... [more]
KUP_SPHAL3.243e-2831.19Probable potassium transport system protein kup OS... [more]
KUP3_LEGPA4.235e-2830.97Probable potassium transport system protein kup 3 ... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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