FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RHOP5 (Probable potassium transport system protein kup 1 OS=Rhodopseudomonas palustris (strain BisA53) GN=kup1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28
Identity = 67/227 (29.52%), Postives = 113/227 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWIL-SLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PR+ IIHTS    GQIY+P  NWTL +  +A+ +GF+ + ++  A G+AV   M++ T L++ V+ L W                V+  +F+A+ IK  +G W P+ +  +    +  W  G         +  V ++ ++ +LGP+  + R RG  +  T    G+P    H + +    HQ VV   + +   P+V   ER ++
Sbjct:  301 SQAVISGAFSVARQAIQLGLLPRMTIIHTSGDEEGQIYVPFTNWTLYVAVMALVIGFQSSSNLAAAYGIAVTGTMMIDTILVAFVMALMWRWPLALVIAVAGTLLLVDLAFFTANAIKVAQGGWFPVFIGIVSFTVLTTWRRGRELVRNQIKKLAVPLDVVMRALGPD--VARARGTAIFLTAATDGVPPALLHNLKHNQTVHQRVVLATVMTTEAPYVPDTERIVL 525          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ZYMMO (Probable potassium transport system protein kup OS=Zymomonas mobilis GN=kup PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.531e-28
Identity = 65/223 (29.15%), Postives = 109/223 (48.88%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  FS+ +Q   LG  PR+++ HTS+   GQIYIP +NW LM + + +   F+++ ++ NA G+AV   M +T+C+M +++   WH               ++  +F +++ K  EG W P+ + F+    +  W  G     E   Q  + I   +        VR+ G  +  T    G+P    H + +    H+ V+ L +K   VP+V P  R
Sbjct:  326 SQAVITGAFSVTQQAIQLGYIPRLRVNHTSASTVGQIYIPSVNWVLMFMVMVLIAMFKNSTNLANAYGIAVTGTMFITSCMMGVLVHRVWHWKAWQSIPLVSFFLLIDGAFFLSNVTKIPEGGWFPLLVGFVVFTMLMTWSRGRHLMAERMRQVAMPIQLFIR-SAAASAVRIPGTAIFLTPEDDGVPHALLHNLKHNKILHERVILLTVKIEDVPYVDPHYR 547          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_DECAR (Probable potassium transport system protein kup 2 OS=Dechloromonas aromatica (strain RCB) GN=kup2 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.531e-28
Identity = 68/223 (30.49%), Postives = 113/223 (50.67%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+ +Q   +G  PR++IIHTS    GQIY+P  NW+L L  +A+ +GF+++ ++  A G+AV   ML+ T L++ V+VL W  +             V+  +F+A+ IK  EG W P+A+  +    +  W  G  ++   +   K SI     L     + R+ G  +  T    G+P    H + +    H+ VV + +++   P V   ER
Sbjct:  302 SQAVISGAFSVARQSIQMGLLPRMQIIHTSGMEEGQIYVPFTNWSLYLAVIALVIGFKNSSNLAAAYGIAVTGTMLIDTILVAFVMVLMWKWNKLLVALVAGTLLLVDIAFFAANAIKIPEGGWFPLAMGLVSFTVLTTWRRG--RRMVSEEMAKQSIPMSDFLQSIDDVHRIYGTAIFMTSAKDGVPPALLHNLKHNQVLHERVVLVTVQTTDTPTVNDMER 522          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RHOPB (Probable potassium transport system protein kup 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=kup1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.224e-28
Identity = 67/224 (29.91%), Postives = 112/224 (50.00%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWIL-SLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PR+ I+HTS +  GQIYIP  NWTL +  +A+ +GF+ + ++  A G+AV   M++ T L++ V+ L W                V+  +F A++IK  +G W P+ +  +    +  W  G         +  V ++ ++ +LGPN  + R RG  +  T    G+P    H + +    HQ VV   + +   P+V   ER
Sbjct:  300 SQAVISGAYSVARQAIQLGLLPRMTIVHTSGEEEGQIYIPFTNWTLYIAVMALVIGFQSSSNLAAAYGIAVTGTMMIDTILVAFVMALMWRWHWIAVAAVAGTLLLVDLAFFFANIIKVAQGGWFPLFIGVLSFTVLTTWRRGRELVRNQVKKLAVPLDVVMRALGPN--VSRARGTAVFLTAATDGVPPALLHNLKHNQTVHQRVVLATVMTADTPYVPDSER 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_SYNFM (Probable potassium transport system protein kup 1 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=kup1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27
Identity = 67/226 (29.65%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PRV I+HTS++  GQIYIPE+N  +M++C+ + + FR +  +  A G+AV   M +T+ +   V    W  S              +  YF ++L+KF +G W P+A++ + ++ M  W  G  + Y+  V++  +++  L       + RV G  +      S  P    H   +    H+ V+ L I+    P V   ER  V
Sbjct:  340 SQAMISGAFSLTRQAVQLGYIPRVTIVHTSAETEGQIYIPEVNRLMMVVCIGLVLVFRASSGLAGAYGVAVTANMAITSVVYFFVATRTWGWSTAKTAPLVGLFLVFDITYFGSNLLKFFDGGWFPLAVALVIVIVMASWKDGRAELYKHIVKSSPTLDMFLEDVSRHNVHRVAGTAVFMASTSSLTPPSLMHHFKHNKVLHEEVILLTIEVTHTPQVPAAERIRV 565          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP3_LEGPC (Probable potassium transport system protein kup 3 OS=Legionella pneumophila (strain Corby) GN=kup3 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27
Identity = 69/226 (30.53%), Postives = 112/226 (49.56%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQAIIT  FS+ +Q   LG  PR+++  TSS+ +GQIYI  +NW LML  L + +GF  ++ +  A G+AV   ML T+ L+ + +   W  +             V+A +F+A+L KF+ G ++PI L+ I    MY+WH G         +  ++++  L      G+VRV    +  T     IP      V         V+ L I ++ +P  +P ++  +
Sbjct:  307 SQAIITGAFSMTRQAMQLGWLPRLRVTQTSSEGYGQIYIGVVNWLLMLATLGLIIGFGSSEKLAAAYGIAVSATMLCTSVLLFIALHKLWKWNIIKSGLVAGLFMIVDASFFAANLTKFINGGYIPITLAIIIYSMMYIWHKGYKTIAIKQKEKNITVDSFLDSIQKEGVVRVPKTAVFLTSKEQDIPPTLVWHVKKNHVLQDKVIILNINNLSIPWCKPGDQLQI 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_BRASO (Probable potassium transport system protein kup 1 OS=Bradyrhizobium sp. (strain ORS278) GN=kup1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 66/226 (29.20%), Postives = 119/226 (52.65%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQ++IT  FS+ +Q   LG  PR+ I  TSS+ +GQIY+  +NW LML+ +++T+GF  + ++ +A G+AV   ML+T+ L+ + +   W  S            ++++ +F A+L K  EG +VP+ L+      M++WH G     E   +  + +   ++      + RV G  +  T    G P +    V +  A H+ ++ L ++ + +P V PD+R  +
Sbjct:  303 SQSVITGAFSMTRQAIQLGWMPRLAIKQTSSEGYGQIYVGAVNWLLMLVTVSLTIGFGKSDNLASAYGIAVSLTMLMTSALLFIAMREIWQWSLLAAGAVAGVFLTIDSAFFLANLTKIAEGGYVPLLLATSVYGLMWIWHRGAAAVAERMRERLIPVAQFMADIAEKKVPRVPGTAVFLTRTERGAPPVMLWHVKHNRALHEHLLVLRVEVISIPWVAPDDRLKI 528          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_BRASB (Probable potassium transport system protein kup 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=kup1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 76/226 (33.63%), Postives = 113/226 (50.00%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG---TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQAII+  FS+ +Q   LG  PR+ I  TS+  +GQIYI  +NWTLM L L +T+GFR + ++  A G+AV   ML+T+ LM L +   W  +             V+  + SA+L+K LEG W P+ ++ +    M  WH G    +KK E D     +  +I  +G      RV G  +  T  +  +P    H + +    H  +V L + +   P V PD R
Sbjct:  292 SQAIISGAFSMTRQAIQLGLCPRLNIAQTSATGYGQIYIGFVNWTLMALTLGLTLGFRSSDNLAAAFGIAVSLTMLLTSILMFLTMREIWKWNLAASLLTAGLFVVVDMSFVSANLMKVLEGGWFPLVVAAVIFFLMMTWHQGRDLLVKKLERDTLPLAT--FIAQVGAK---TRVPGTAVYMTSRLDVVPVPLLHNLKHNKVLHDRIVLLRVVTASTPRVAPDLR 512          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ANAD2 (Probable potassium transport system protein kup OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=kup PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.043e-26
Identity = 69/223 (30.94%), Postives = 111/223 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PRV I HTS +  GQIY+PE+NW L   CLA+ +GF+ +  + +A G+AV   M+VTT L   V+   W  +            +V+A +F A+++KF +G W PIA + +    M  W  G            + ++  ++      + RV G  +  T    G+P +  H + +    H+ VV + I +  +P V   ER
Sbjct:  345 SQALISGAYSLTQQAIQLGYSPRVTIRHTSQREIGQIYLPEVNWMLGTACLALVLGFQTSSRLASAYGIAVTGTMIVTTLLFHRVMRDRWGWARWKAWPLTVLFLTVDAAFFLANVVKFRDGGWFPIAAAALVFTLMSTWKRGRDALALMLKDAGLPLDLFMADVARRKVQRVAGTAVFMTSNPGGVPPVLLHHLKHNKVLHERVVLVSILAHEIPFVNEPER 567          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ANASK (Probable potassium transport system protein kup OS=Anaeromyxobacter sp. (strain K) GN=kup PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 69/223 (30.94%), Postives = 111/223 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PRV I HTS +  GQIY+PE+NW L   CLA+ +GF+ +  + +A G+AV   M+VTT L   V+   W  +            +V+A +F A+++KF +G W PIA + +    M  W  G            + ++  ++      + RV G  +  T    G+P +  H + +    H+ VV + I +  +P V   ER
Sbjct:  345 SQALISGAYSLTQQAIQLGYSPRVTIRHTSQREIGQIYLPEVNWMLGTACLALVLGFQTSSRLASAYGIAVTGTMIVTTLLFHRVMRDRWGWARWKAWPLTSLFLTVDASFFLANVVKFRDGGWFPIAAAALVFTLMSTWKRGRDALALMLKDAGLPLDLFMADVARRKVQRVAGTAVFMTSNPGGVPPVLLHHLKHNKVLHERVVLVSILAHEIPFVNEPER 567          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP1_RHOP54.235e-2829.52Probable potassium transport system protein kup 1 ... [more]
KUP_ZYMMO5.531e-2829.15Probable potassium transport system protein kup OS... [more]
KUP2_DECAR5.531e-2830.49Probable potassium transport system protein kup 2 ... [more]
KUP1_RHOPB7.224e-2829.91Probable potassium transport system protein kup 1 ... [more]
KUP1_SYNFM1.232e-2729.65Probable potassium transport system protein kup 1 ... [more]
KUP3_LEGPC1.609e-2730.53Probable potassium transport system protein kup 3 ... [more]
KUP1_BRASO2.745e-2729.20Probable potassium transport system protein kup 1 ... [more]
KUP1_BRASB2.745e-2733.63Probable potassium transport system protein kup 1 ... [more]
KUP_ANAD21.043e-2630.94Probable potassium transport system protein kup OS... [more]
KUP_ANASK1.362e-2630.94Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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