FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RALSO (Probable potassium transport system protein kup 1 OS=Ralstonia solanacearum GN=kup1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 72/230 (31.30%), Postives = 118/230 (51.30%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGT----LKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+  Q   LG  PR+KI++TS    GQIY+P +N+ L+LL +A+ + F  + ++  A G+AV T ML+TT L+++V+   W  S            +V+  +F A+L+K   G W P+ L  +    M  WH GT     +  E  +  +  +  +LS  P     RV G  +  T  +  +P    H + +    H  V+F+  ++  VP+V P +R +V
Sbjct:  291 SQAVISGAFSMTAQAVHLGYAPRMKILYTSDVEIGQIYVPVVNYALLLLVVAVVLAFGKSDNLAAAYGIAVTTTMLLTTGLVTVVMRNAWKWSLPAVALLGTVFLAVDLSFFGANLLKVAAGGWFPLLLGGLIFFLMVTWHTGTQLLKARNVEGGIPLEPFMEGLLSHPP----YRVDGTAVYLTPSIEFVPLALLHNLKHNHVLHSRVLFIHFRTQAVPYVEPAKRLVV 516          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_XYLFT (Probable potassium transport system protein kup OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=kup PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 71/229 (31.00%), Postives = 116/229 (50.66%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGI---VRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT ++S+  Q   LG  PR+ + HTS    GQIY+P +NWTL++L +   +GF D+  M +A G+AV   M++TT LM +                     +V+  +F A++IKF++GAW P+ L  +    M  W  G  +K   +   K  IN + +  P L +   V+V G  +  T   + +P    H + +    H+  VFL +K++ +P+    ER  +
Sbjct:  312 SQALITGSYSLSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLMLVILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARANPRVPRLMLLMIAIVFIAVDGAFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRG--RKLLHEEMRKDGIN-LDNFLPGLMLAPPVKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKI 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_MYXXD (Probable potassium transport system protein kup OS=Myxococcus xanthus (strain DK 1622) GN=kup PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 68/223 (30.49%), Postives = 110/223 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I   FS+ +Q   LG  PR++++HTS++  GQIY+P +NW L++  +A+ +GFR +  + +A G+AV T M++TT +  +V    W               SVE  +F A+ +K  +G W P+ ++ +    M  W  G          + + +  +L    +   VRV G  +  T    G P    H + +    H+ VV L I S  +PHV   ER
Sbjct:  332 SQALIAGVFSLTRQAMQLGYSPRMEVVHTSAEEMGQIYLPGLNWALLVGVVALVLGFRSSSALASAYGIAVSTAMVITTLMAYVVARELWGVRRWVAIPVVGLFLSVELAFFGANAVKVADGGWFPLLMAVVVFTLMTTWKRGRDILAAKLRASSIPLKVLLGSFGDHPPVRVPGTAIFMTGNAEGTPPALLHNLKHNKVLHEQVVLLTILSEELPHVPHSER 554          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_XYLFA (Probable potassium transport system protein kup OS=Xylella fastidiosa GN=kup PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 71/229 (31.00%), Postives = 115/229 (50.22%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGI---VRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+IT ++S+  Q   LG  PR+ + HTS    GQIY+P +NWTL+ L +   +GF D+  M +A G+AV   M++TT LM +                     +V+  +F A++IKF++GAW P+ L  +    M  W  G  +K   +   K  IN + +  P L +   V+V G  +  T   + +P    H + +    H+  VFL +K++ +P+    ER  +
Sbjct:  312 SQALITGSYSLSSQAMQLGYIPRMNVRHTSQSTIGQIYVPTVNWTLLTLVILTVIGFGDSTSMASAYGVAVTGTMMITTVLMIIYARANPRVPRLMLWMMAIVFIAVDGAFFYANIIKFMDGAWFPLLLGVVIFTFMRTWLRG--RKLLHEEMRKDGIN-LDNFLPGLMLAPPVKVPGTAVFLTADSTVVPHALMHNLKHNKVLHERNVFLTVKTLKIPYAANSERLKI 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURS3 (Probable potassium transport system protein kup OS=Burkholderia sp. (strain 383) GN=kup PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 64/227 (28.19%), Postives = 116/227 (51.10%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+  Q   LG  PR+K++HTS    GQIY+P +NW L+ + L I +GF+ + ++  A G+AV   M++TT L ++V+V  W+ +            +V+  +F A+L+K  +G W+P+ +  +    +  W+ G     E    + +     +  +L+  P+    RV G  +  T     +P    H + +    H+  +FL   +  +P+VR D+R
Sbjct:  316 SQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLFVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLAAVVMVKVWNWNRLLVGAIIAVFLAVDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPH----RVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKR 538          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURVG (Probable potassium transport system protein kup OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=kup PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.177e-26
Identity = 64/227 (28.19%), Postives = 116/227 (51.10%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+  Q   LG  PR+K++HTS    GQIY+P +NW L+ + L I +GF+ + ++  A G+AV   M++TT L ++V+V  W+ +            +V+  +F A+L+K  +G W+P+ +  +    +  W+ G     E    + +     +  +L+  P+    RV G  +  T     +P    H + +    H+  +FL   +  +P+VR D+R
Sbjct:  315 SQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLAAVVMVRVWNWNRLLVGAIIAVFLAVDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPH----RVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKR 537          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_AZOSE (Probable potassium transport system protein kup OS=Azoarcus sp. (strain EbN1) GN=kup PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.177e-26
Identity = 66/226 (29.20%), Postives = 108/226 (47.79%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  +S+ +Q   LG  PR++ I TS +  GQIY+P INW L+   +A+ VGFR +  + +A G+AV   M++ T L  +V+   W               +V+  +FSA+ +K L G W P+ +  +    +  W  G          + + ++  +    N    RV G  +  T  + G+P    H + +    H  VV L +++  VPHV   ER  V
Sbjct:  319 SQAVISGAYSLTRQAMQLGYAPRMRTIFTSEREMGQIYVPSINWMLLGAVVALVVGFRSSSALASAYGIAVTLTMMIDTLLAFVVVRALWGWGRLQAGLFLGVFLAVDVAFFSATTVKILAGGWFPLLVGALIFTLLTTWKRGRELLNRRLRTDTIPLDTFIRSMFNSPSPRVDGTAVFLTTWLEGVPRALLHNLVHNKVLHHRVVLLTVETADVPHVPDSERVAV 544          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_RHOPA (Probable potassium transport system protein kup 2 OS=Rhodopseudomonas palustris GN=kup2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.177e-26
Identity = 64/224 (28.57%), Postives = 112/224 (50.00%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PR++I  TS    GQIYIP  NW L++  L +   F+ +  + +A G+AV   M++T+ +   V+  CWH               ++ ++  A+L+K ++G W+P+ +    +  M  W  G+       V++++ +N +I S+  +  I RVRG  +  T   +  P    H + +    H+  V L + +  VP V  DER
Sbjct:  312 SQAVISGAYSLTQQAIQLGLLPRMEIRRTSETEKGQIYIPRANWLLLIAVLYLVFAFKSSSALASAYGIAVTGTMVLTSIMAFFVMRKCWHWPAAVATAIIVPFLIIDLIFLMANLLKIVDGGWIPLMIGVGLMGVMVTWRRGSKIVARKTVRDEIDLNDFIASISVSSSISRVRGTAVFLTGNPNSTPTSLMHNLKHNKVLHEKNVILRVATEDVPRVSEDER 535          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ANADE (Probable potassium transport system protein kup OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=kup PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 67/223 (30.04%), Postives = 111/223 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PRV I HTS +  GQIY+PE+NW L   C+A+ +GF+ +  + +A G+AV   M+VTT L   V+   W  +            +V+A +F A+++KF +G W PIA + +    M  W  G            + ++  ++      + RV G  +  T    G+P +  H + +    H+ V+ + I +  +P V   ER
Sbjct:  344 SQALISGAYSLTQQAIQLGYSPRVTIRHTSQREIGQIYLPEVNWMLGTACVALVLGFQTSSRLASAYGIAVTGTMIVTTLLFHRVMRDRWGWARWKAWPLTVLFLTVDASFFLANVVKFRDGGWFPIAAAALVFTLMSTWKRGRDALALMLKDAGLPLDLFMADVARRKVQRVAGTAVFMTSNPGGVPPVLLHHLKHNKVLHERVILVSILAHEIPFVAEAER 566          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURTA (Probable potassium transport system protein kup OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=kup PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26
Identity = 64/230 (27.83%), Postives = 117/230 (50.87%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  +S+  Q   LG  PR+KI+HTS    GQIY+P +NW L+ + L I +GF+ + ++  A G+AV   M++TT L ++V+V  W+ +             ++  +F A+L+K  +G W+P+ +  +    +  W+ G     E    + +     +  +L+  P+    RV G  +  T   + +P    H + +    H+  +F+   +  +P+V+ DER  V
Sbjct:  308 SQAVISGAYSLTSQAIQLGYVPRMKILHTSELAIGQIYVPVVNWLLLFVILCIVIGFKSSDNLAAAYGIAVTATMVITTILAAVVMVKVWNWNKLLVAMIIGVFLVIDLGFFGANLLKVEQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLAPFLQGLLAHPPH----RVSGTAIYLTGNDTLVPVSLLHNLKHNKVLHERTIFMTFVTRDIPYVKDDERVTV 533          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP1_RALSO1.362e-2631.30Probable potassium transport system protein kup 1 ... [more]
KUP_XYLFT1.779e-2631.00Probable potassium transport system protein kup OS... [more]
KUP_MYXXD1.779e-2630.49Probable potassium transport system protein kup OS... [more]
KUP_XYLFA3.964e-2631.00Probable potassium transport system protein kup OS... [more]
KUP_BURS33.964e-2628.19Probable potassium transport system protein kup OS... [more]
KUP_BURVG5.177e-2628.19Probable potassium transport system protein kup OS... [more]
KUP_AZOSE5.177e-2629.20Probable potassium transport system protein kup OS... [more]
KUP2_RHOPA5.177e-2628.57Probable potassium transport system protein kup 2 ... [more]
KUP_ANADE6.761e-2630.04Probable potassium transport system protein kup OS... [more]
KUP_BURTA8.831e-2627.83Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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