FC920914
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURCH (Probable potassium transport system protein kup OS=Burkholderia cenocepacia (strain HI2424) GN=kup PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26 Identity = 64/227 (28.19%), Postives = 115/227 (50.66%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672 SQA+I+ +S+ Q LG PR+K++HTS GQIY+P +NW L+ + L I VGF+ + ++ A G+AV M++TT L +V+V W+ + +++ +F A+L+K +G W+P+ + + + W+ G E + + + +L+ P+ RV G + T +P H + + H+ +FL + +P+VR D+R Sbjct: 316 SQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVVMVKVWNWNRLLVGAIIAVFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPH----RVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKR 538
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURCA (Probable potassium transport system protein kup OS=Burkholderia cenocepacia (strain AU 1054) GN=kup PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 8.831e-26 Identity = 64/227 (28.19%), Postives = 115/227 (50.66%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672 SQA+I+ +S+ Q LG PR+K++HTS GQIY+P +NW L+ + L I VGF+ + ++ A G+AV M++TT L +V+V W+ + +++ +F A+L+K +G W+P+ + + + W+ G E + + + +L+ P+ RV G + T +P H + + H+ +FL + +P+VR D+R Sbjct: 316 SQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLAVILCIVVGFKSSDNLAAAYGIAVTATMVITTVLACVVMVKVWNWNRLLVGAIIAVFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPH----RVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKR 538
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURXL (Probable potassium transport system protein kup OS=Burkholderia xenovorans (strain LB400) GN=kup PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 65/230 (28.26%), Postives = 115/230 (50.00%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681 SQA+I+ +S+ Q LG PR+KI+HTS GQIY+P +NW L+ + L I + F+ + ++ A G+AV M++TT L +V+V W+ + +V+ +F A+L+K EG W+P+ + + + W+ G + E + + + +L+ P+ RV G + T S +P H + + H+ +FL + +P+V +R V Sbjct: 306 SQAVISGAYSLTSQAIQLGYVPRMKILHTSELAIGQIYVPVVNWMLLFIILCIVIAFKSSDNLAAAYGIAVTATMVITTILACVVMVKVWNWNKLLVALIIGVFMTVDLGFFGANLLKVEEGGWLPLGIGALLFFLLMTWYKGRMIVKERTAADGIPLMPFLQGLLAHPPH----RVSGTAIYLTGSDSLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVNDADRVTV 531
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_LEGPH (Probable potassium transport system protein kup 2 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=kup2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 70/224 (31.25%), Postives = 117/224 (52.23%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERF 675 SQAII+A FSI+KQ S L PR+KII+TS G++Y+P IN+ L L ++ V F+ + ++ +A G+AV ML+TT L+ ++ CW+ +E +F+ ++ K L G W+PI ++F+ V MY WH G K E ++ + +I+ I R G+GL + H + F + ++F+ IK P++ +++F Sbjct: 300 SQAIISAAFSILKQASLLNLIPRLKIIYTSKFEKGEVYLPLINFILALGTCSLVVIFKSSSNLADAYGIAVNLDMLITTVLVGIIAYYCWNWHAFKVMIFPLIL-VIELAFFAGNIPKLLTGGWIPILIAFLGFVVMYTWHCGFEKLRELHHRDALMDAFIIDELNQNKISRQSGMGLYIIDPYDCEGESLLHHLRLNRIFFENMIFVSIKIENKPYIPIEDKF 522
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURCM (Probable potassium transport system protein kup OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=kup PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25 Identity = 63/227 (27.75%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672 SQA+I+ +S+ Q LG PR+K++HTS GQIY+P +NW L+ + L I +GF+ + ++ A G+AV M++TT L +V+V W+ + +++ +F A+L+K +G W+P+ + + + W+ G E + + + +L+ P+ RV G + T +P H + + H+ +FL + +P+VR D R Sbjct: 315 SQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLFVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLACVVMVKVWNWNRLLVGAIIAVFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPH----RVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDTR 537
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BURA4 (Probable potassium transport system protein kup OS=Burkholderia ambifaria (strain MC40-6) GN=kup PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25 Identity = 63/227 (27.75%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVS----INWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672 SQA+I+ +S+ Q LG PR+K++HTS GQIY+P +NW L+ + L I +GF+ + ++ A G+AV M++TT L +V+V W+ + +++ +F A+L+K +G W+P+ + + + W+ G E + + + +L+ P+ RV G + T +P H + + H+ +FL + +P+VR D R Sbjct: 315 SQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLFVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLACVVMVKVWNWNRLLVGAIIAIFLAIDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPH----RVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDTR 537
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPY (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=kup PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25 Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681 SQA+I+ FS+ +Q LG P ++IIHTS GQIYIP INWTL L + + +GF + ++ A G+AV M++T+ L V WH + ++ FSA+++K G W+P++L + + M W ++ S+ +++ VRV G + + ++ IP H + + H+ VV L +++ VP+V ER + Sbjct: 301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPS (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis GN=kup PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25 Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681 SQA+I+ FS+ +Q LG P ++IIHTS GQIYIP INWTL L + + +GF + ++ A G+AV M++T+ L V WH + ++ FSA+++K G W+P++L + + M W ++ S+ +++ VRV G + + ++ IP H + + H+ VV L +++ VP+V ER + Sbjct: 301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPP (Low affinity potassium transport system protein kup OS=Yersinia pestis (strain Pestoides F) GN=kup PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25 Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681 SQA+I+ FS+ +Q LG P ++IIHTS GQIYIP INWTL L + + +GF + ++ A G+AV M++T+ L V WH + ++ FSA+++K G W+P++L + + M W ++ S+ +++ VRV G + + ++ IP H + + H+ VV L +++ VP+V ER + Sbjct: 301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPN (Low affinity potassium transport system protein kup OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=kup PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25 Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681 SQA+I+ FS+ +Q LG P ++IIHTS GQIYIP INWTL L + + +GF + ++ A G+AV M++T+ L V WH + ++ FSA+++K G W+P++L + + M W ++ S+ +++ VRV G + + ++ IP H + + H+ VV L +++ VP+V ER + Sbjct: 301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526 The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 340
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bpback to top |