FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPG (Low affinity potassium transport system protein kup OS=Yersinia pestis bv. Antiqua (strain Angola) GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  P ++IIHTS    GQIYIP INWTL L  + + +GF  + ++  A G+AV   M++T+ L   V    WH +             ++   FSA+++K   G W+P++L  +  + M  W            ++  S+  +++       VRV G  +  +  ++ IP    H + +    H+ VV L +++  VP+V   ER  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPE (Low affinity potassium transport system protein kup OS=Yersinia pestis GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  P ++IIHTS    GQIYIP INWTL L  + + +GF  + ++  A G+AV   M++T+ L   V    WH +             ++   FSA+++K   G W+P++L  +  + M  W            ++  S+  +++       VRV G  +  +  ++ IP    H + +    H+ VV L +++  VP+V   ER  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPB (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  P ++IIHTS    GQIYIP INWTL L  + + +GF  + ++  A G+AV   M++T+ L   V    WH +             ++   FSA+++K   G W+P++L  +  + M  W            ++  S+  +++       VRV G  +  +  ++ IP    H + +    H+ VV L +++  VP+V   ER  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERPA (Low affinity potassium transport system protein kup OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  P ++IIHTS    GQIYIP INWTL L  + + +GF  + ++  A G+AV   M++T+ L   V    WH +             ++   FSA+++K   G W+P++L  +  + M  W            ++  S+  +++       VRV G  +  +  ++ IP    H + +    H+ VV L +++  VP+V   ER  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVVFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_YERP3 (Low affinity potassium transport system protein kup OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 66/226 (29.20%), Postives = 111/226 (49.12%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  P ++IIHTS    GQIYIP INWTL L  + + +GF  + ++  A G+AV   M++T+ L   V    WH +             ++   FSA+++K   G W+P++L  +  + M  W            ++  S+  +++       VRV G  +  +  ++ IP    H + +    H+ VV L +++  VP+V   ER  +
Sbjct:  301 SQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTI 526          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PSEAE (Probable potassium transport system protein kup OS=Pseudomonas aeruginosa GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 70/226 (30.97%), Postives = 109/226 (48.23%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PR+ I HTSS   GQIYI  +NW LM+  + + +GF  +  +  A G+AV   ML+TT LM +VI   W               +V++L+F+A+L K ++G   P+    +  + M  W  G     E   +  + ++  +S        RV+G  +  T     +P    H + +    H+ VV L + +   P V PD RF V
Sbjct:  313 SQAVISGAFSLTRQAIQLGYVPRMTIQHTSSHEQGQIYIGGVNWALMVGVVLLVLGFESSASLAAAYGVAVTGTMLITTLLMGVVIWRLWKWPLWLGVPFFCVMLAVDSLFFAANLPKVIQGGAFPVIAGIVIFILMSTWKRGRQLLVERLDEGSLPLSVFISSMRVQPPHRVQGTAVFLTARTDAVPHALLHNLLHNQVLHEQVVLLTVVNEDSPRVSPDRRFEV 538          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PSEA8 (Probable potassium transport system protein kup OS=Pseudomonas aeruginosa (strain LESB58) GN=kup PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 70/226 (30.97%), Postives = 109/226 (48.23%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PR+ I HTSS   GQIYI  +NW LM+  + + +GF  +  +  A G+AV   ML+TT LM +VI   W               +V++L+F+A+L K ++G   P+    +  + M  W  G     E   +  + ++  +S        RV+G  +  T     +P    H + +    H+ VV L + +   P V PD RF V
Sbjct:  313 SQAVISGAFSLTRQAIQLGYVPRMTIQHTSSHEQGQIYIGGVNWALMVGVVLLVLGFESSASLAAAYGVAVTGTMLITTLLMGVVIWRLWKWPLWLGVPFFCVMLAVDSLFFAANLPKVIQGGAFPVIAGIVIFILMSTWKRGRQLLVERLDEGSLPLSVFISSMRVQPPHRVQGTAVFLTARTDAVPHALLHNLLHNQVLHEQVVLLTVVNEDSPRVSPDRRFEV 538          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP4_BRASB (Probable potassium transport system protein kup 4 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=kup4 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 69/224 (30.80%), Postives = 105/224 (46.88%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQ-NKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQ+IIT +FS+ +Q   LG  P   I  TS K++GQIY+P +NW +M+  + IT+ F  +  +  A G AV T ML+TTCL+   +   W                V+  +F A+L+K  EG W+P+    +    M  W  G     E   Q ++    ++  L     + RV G  +  T     IP +    V ++ A HQ V+ L I     P +  +ER
Sbjct:  319 SQSIITGSFSMTRQAMQLGWLPGFHIRQTSDKVYGQIYVPVVNWMMMVATIGITIAFGSSDRLAGAYGTAVSTTMLLTTCLLFTAMRKTWRWPLAVSILIAGLFLIVDVGFFGANLLKIAEGGWLPLTFGALVFFLMLTWRSGIDAVRESLAQASEAPERFVADLAAG-KVPRVPGTAIFLTRTYQKIPPLLIDHVKHMGALHQSVIALTILFEESPRIDDEER 541          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_SYNFM (Probable potassium transport system protein kup 2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=kup2 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 69/225 (30.67%), Postives = 106/225 (47.11%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFL 678
            SQA+I+  FS+ +Q   LG  PR++IIHTS +  GQ+YIPE+N+ LM+ CL + + F+ +  +  A G+AV   M +T+ L   VI   W  S              +  YF A+L K  +G W+ + ++ I   +M  W  G        + +++  N  L         RV G  +  +    GIP    H   +    H+ V+ L I S   P V PD + L
Sbjct:  319 SQAMISGVFSLTQQAIQLGFCPRMRIIHTSRETRGQVYIPEVNYLLMIACLGLVLVFKKSSGLAGAYGIAVTADMALTSILFFFVITRTWKWSLARAVPLLVLFLFFDLSYFGANLFKIFDGGWITLTIAAIVATSMITWKDGRAALARKILSSRLPENLFLEDVARHNPPRVPGTAIFMSVSPMGIPVSLLHHYKHNQVLHEQVILLSITSTDTPTV-PDRKKL 542          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP1_RHOPS (Probable potassium transport system protein kup 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=kup1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 65/224 (29.02%), Postives = 113/224 (50.45%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSI-NWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PR++I  TS    GQIYIP  NW L++  L +   F+ +  + +A G+AV   M++T+ +   V+  CW  S            +V+ ++  A+++K  EG W+P+ +    +  M  W  GT    +  V+++V + ++I S+  +  I RVRG+ +  T   +  P    H + +    H+  V L + +  VP V   ER
Sbjct:  312 SQAVISGAYSLTQQAIQLGLLPRMEIRRTSETEKGQIYIPRANWLLLIAVLYLVFAFKSSSALASAYGIAVTGTMVITSVMAYFVMRKCWKWSVATSALIIAPFLTVDLIFLMANMLKIFEGGWIPLVIGGGLMGVMITWRRGTKIVAKKTVRDEVDLGDFIKSISVSSSISRVRGVAVFLTGNPNSTPTSLMHNLKHNKVLHEKNVILRVVTEDVPRVPEAER 535          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP_YERPG1.967e-2529.20Low affinity potassium transport system protein ku... [more]
KUP_YERPE1.967e-2529.20Low affinity potassium transport system protein ku... [more]
KUP_YERPB1.967e-2529.20Low affinity potassium transport system protein ku... [more]
KUP_YERPA1.967e-2529.20Low affinity potassium transport system protein ku... [more]
KUP_YERP31.967e-2529.20Low affinity potassium transport system protein ku... [more]
KUP_PSEAE1.967e-2530.97Probable potassium transport system protein kup OS... [more]
KUP_PSEA81.967e-2530.97Probable potassium transport system protein kup OS... [more]
KUP4_BRASB1.967e-2530.80Probable potassium transport system protein kup 4 ... [more]
KUP2_SYNFM1.967e-2530.67Probable potassium transport system protein kup 2 ... [more]
KUP1_RHOPS1.967e-2529.02Probable potassium transport system protein kup 1 ... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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