FC920914

Overview
NameFC920914
Unique NameFC920914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_PSEAB (Probable potassium transport system protein kup OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=kup PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 70/226 (30.97%), Postives = 109/226 (48.23%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQA+I+  FS+ +Q   LG  PR+ I HTSS   GQIYI  +NW LM+  + + +GF  +  +  A G+AV   ML+TT LM +VI   W               +V++L+F+A+L K ++G   P+    +  + M  W  G     E   +  + ++  +S        RV+G  +  T     +P    H + +    H+ VV L + +   P V PD RF V
Sbjct:  313 SQAVISGAFSLTRQAIQLGYVPRMTIQHTSSHEQGQIYIGGVNWALMVGVVLLVLGFESSASLAAAYGVAVTGTMLITTLLMGVVIWRLWKWPLWLGVPFFCVMLAVDSLFFAANLPKVIQGGAFPVIAGIVIFILMSTWKRGRQLLVERLDEGSLPLSVFISSMRVQPPHRVQGTAVFLTARTDAVPHALLHNLLHNQVLHEQVVLLTVVNEDSPRVPPDRRFEV 538          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_HERAR (Probable potassium transport system protein kup OS=Herminiimonas arsenicoxydans GN=kup PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 68/218 (31.19%), Postives = 106/218 (48.62%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHV 657
            SQA I+ TFS+ KQ  ALG  PR+KI  TS+   GQIYIP +NW  M++ +   +GF  + ++  A G+AV   M+VTT L   VI   W  +             ++   FSA+++K   G W P+ L  +    M  W  G    +E   ++ + +   L+        RV G  +       G+P    H +++    H+ VVFL ++ + VP+V
Sbjct:  304 SQATISGTFSMTKQAIALGFLPRMKIEFTSASQIGQIYIPAVNWLQMIVVVLAVIGFGSSSNLAAAYGIAVTATMMVTTVLTFFVIRYRWKYNLILCVAATGFFLVIDLSLFSANMLKLFHGGWFPLLLGVVLFTLMLTWKRGRELVFENLQKHAIPLEDFLASLFISPPTRVPGTAIFLRGESDGVPHAMLHNLSHNKVLHERVVFLTVRMMEVPYV 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ACIF2 (Probable potassium transport system protein kup OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=kup PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 71/226 (31.42%), Postives = 106/226 (46.90%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDERFLV 681
            SQ++I+  +S  +Q   LG  PR  IIHTS+   GQIY+P +NW LM+  + + + FR +  +  A G AV   ML+TT L+  V    W  S             ++ ++F A+L+KF+EG W P+A+       M  W +G          + +S+   LS       +RV G  +  T     IP    H + +    H+ VV L IK    P V P  R +V
Sbjct:  307 SQSVISGAYSATRQALLLGYLPRQAIIHTSASERGQIYLPLLNWLLMVAVIVVILWFRSSNALSFAYGTAVTGTMLMTTILVFFVARHSWKWSLWKAGLFCGFFVLLDGVFFGANLLKFVEGGWFPLAIGLAVFTTMSTWRWGRGILASKLYPDTLSVEDFLSSVTPGDPIRVPGTAVYLTMREKAIPHALLHNLKHNKVLHERVVILTIKFEEEPRVLPANRVVV 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP2_CHRVO (Probable potassium transport system protein kup 2 OS=Chromobacterium violaceum GN=kup2 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 61/223 (27.35%), Postives = 111/223 (49.78%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  +S+ +Q   LG  PR+++ HTS K  GQIY+P INW L++  L + + F+++  +  A G+AV   ML+TT L  +V  + W              G ++  +F+A++ K  +G W+P+ +       M  W  G    ++   +  + ++  +         RV G  +  T  + G+P    H + +    H+ VV + +++  +P+V  DER
Sbjct:  300 SQAVISGAYSLTRQAILLGYCPRLEVHHTSDKEIGQIYMPFINWALLVAVLVVVLTFKNSSSLAAAYGIAVTGTMLITTMLFFVVARVNWRWPLPLALGITLLFGVIDTAFFAANVHKVADGGWLPLVMGMAIFTLMSTWKQGRDILFKRLREQALPLDDFIHNLEAYPPARVEGTAVFLTSTLHGVPHALLHNLKHNKVLHERVVLMTVRTEDIPYVPEDER 522          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_RALME (Probable potassium transport system protein kup OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=kup PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 69/227 (30.40%), Postives = 114/227 (50.22%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYG----TLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FS+  Q   LG  PR++I +TS+   GQIY+P INW L++L + + + F+ + ++  A G+AV T M++TT L +LV+   W  +             V+  +F+A+L+K  EG W P+ +       +  WH G      +  E  +  +  I  +L+  P+    RV G  +  T     +P    H + +    H+ VVFL   +  +P+V  DER
Sbjct:  310 SQAVISGAFSLTSQAIQLGFMPRMRIRYTSAAEIGQIYMPVINWILLVLVICVVLAFKKSDNLAAAYGIAVTTTMVITTFLAALVMRNVWKWNPALVTLISLTFLVVDMSFFAANLLKIAEGGWFPLLMGGSAFFLLMTWHSGRKLLRARSLEDGIPLEPFIAGLLAHPPH----RVEGTAVFLTGNTESVPVSLLHNLKHNRVLHERVVFLQFVTRDIPYVDDDER 532          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_JANMA (Probable potassium transport system protein kup OS=Janthinobacterium sp. (strain Marseille) GN=kup PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 71/218 (32.57%), Postives = 104/218 (47.71%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHV 657
            SQA I+ TFS+ KQ  ALG  PR+KI  TS+   GQIYIP +NW  M + +   VGF  +  +  A G+AV   MLVTT L   VI   W  +             ++   FSA+++K   G W P+ L  I    M  W  G    +E   ++ + +   L+        RV G  +       G+P    H +++    H+ VVFL ++ + VP+V
Sbjct:  304 SQATISGTFSMTKQAIALGFLPRMKIEFTSASQIGQIYIPAVNWLQMAVVVMAVVGFGSSSDLAAAYGIAVTATMLVTTILTFFVIRYRWKYNLLLCLASTGFFLVIDLSLFSANMLKLFHGGWFPLLLGTILFTLMLTWKRGRELVFENLQKHAIPLEDFLASLFISPPTRVPGTAIFLRGESDGVPHAMLHNLSHNKVLHERVVFLTVRMMEVPYV 521          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_ERYLH (Probable potassium transport system protein kup OS=Erythrobacter litoralis (strain HTCC2594) GN=kup PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 64/224 (28.57%), Postives = 113/224 (50.45%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSIN-WILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+I+  FSI  Q   LG  PR+ + HTS    GQIYIP INW LM+  + + + F+++ ++ +A G+AV   + + T LM++++V  W                ++  YF+A+L K  +G W P+ +  I    +  W  G  +K   +  ++V++   I +   +    RV G  +      +G+P+   H + +    H+ VV L ++   +P+V P +R
Sbjct:  302 SQAVISGAFSITHQAIQLGFVPRLSVRHTSDAHSGQIYIPVINWALMVAVILLVLTFQNSSNLASAYGIAVTGAVTIDTLLMAVLLVGVWKWKWYYAAPVVIVFLIIDGAYFAANLTKVPDGGWFPLVVGLIVFTLLTTWARG--RKLMRERMSEVALPIEIFAKSAHNSATRVPGTAIFMASSTAGVPSALLHNIKHNKVLHERVVILTVEISDIPYVDPAKR 523          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BRUSU (Probable potassium transport system protein kup OS=Brucella suis GN=kup PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 66/223 (29.60%), Postives = 110/223 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   L   PR++I HTS K+HGQIYIP +N  L L  + + +GF  + ++  A G+AV   MLVTT L+ +V+   W+               ++ L+FSA++IK  EG W  I ++ + ++ M+ W  GT   ++   + +V ++ I+          V G  +  T      P    H + +    H+  V L + +   P V   +R
Sbjct:  330 SQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIVMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVASADR 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BRUSI (Probable potassium transport system protein kup OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=kup PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 66/223 (29.60%), Postives = 110/223 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   L   PR++I HTS K+HGQIYIP +N  L L  + + +GF  + ++  A G+AV   MLVTT L+ +V+   W+               ++ L+FSA++IK  EG W  I ++ + ++ M+ W  GT   ++   + +V ++ I+          V G  +  T      P    H + +    H+  V L + +   P V   +R
Sbjct:  330 SQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIVMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVASADR 552          
BLAST of FC920914 vs. ExPASy Swiss-Prot
Match: KUP_BRUME (Probable potassium transport system protein kup OS=Brucella melitensis GN=kup PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 66/223 (29.60%), Postives = 110/223 (49.33%), Query Frame = 1
Query:    4 SQAIITATFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKHMGNASGLAVITVMLVTTCLMSLVIVLCWHQSXXXXXXXXXXXGSVEALYFSASLIKFLEGAWVPIALSFIFLVAMYVWHYGTLKKYEFDVQNKVSINWILSLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPDER 672
            SQA+IT  +S+ +Q   L   PR++I HTS K+HGQIYIP +N  L L  + + +GF  + ++  A G+AV   MLVTT L+ +V+   W+               ++ L+FSA++IK  EG W  I ++ + ++ M+ W  GT   ++   + +V ++ I+          V G  +  T      P    H + +    H+  V L + +   P V   +R
Sbjct:  330 SQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIVMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVASADR 552          
The following BLAST results are available for this feature:
BLAST of FC920914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 340
Match NameE-valueIdentityDescription
KUP_PSEAB2.569e-2530.97Probable potassium transport system protein kup OS... [more]
KUP_HERAR2.569e-2531.19Probable potassium transport system protein kup OS... [more]
KUP_ACIF22.569e-2531.42Probable potassium transport system protein kup OS... [more]
KUP2_CHRVO2.569e-2527.35Probable potassium transport system protein kup 2 ... [more]
KUP_RALME3.356e-2530.40Probable potassium transport system protein kup OS... [more]
KUP_JANMA4.383e-2532.57Probable potassium transport system protein kup OS... [more]
KUP_ERYLH4.383e-2528.57Probable potassium transport system protein kup OS... [more]
KUP_BRUSU4.383e-2529.60Probable potassium transport system protein kup OS... [more]
KUP_BRUSI4.383e-2529.60Probable potassium transport system protein kup OS... [more]
KUP_BRUME4.383e-2529.60Probable potassium transport system protein kup OS... [more]

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Properties
Property NameValue
Genbank descriptionC32014G04EF RVDevelop1 Citrus clementina cDNA clone C32014G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920914 ID=FC920914; Name=FC920914; organism=Citrus clementina; type=EST; length=683bp
GGAAGTCAAGCCATTATCACTGCAACTTTCTCGATAATAAAACAGTGCTC
TGCTTTGGGTTGCTTTCCAAGGGTCAAAATCATTCATACATCTTCCAAAA
TACATGGCCAGATTTACATTCCAGAGATCAACTGGACATTAATGCTTTTA
TGCTTGGCTATTACTGTTGGTTTTAGAGACACAAAACACATGGGGAACGC
ATCAGGTTTAGCAGTTATAACTGTCATGCTGGTAACAACCTGTCTAATGT
CTCTGGTCATTGTCTTATGCTGGCATCAGAGCATTTTCTTTGCCATTTGT
TTTATAATCTTCTTCGGCTCGGTTGAAGCACTTTACTTTTCAGCATCCCT
CATCAAGTTCTTAGAAGGGGCATGGGTTCCTATTGCCCTCTCATTTATTT
TTCTAGTTGCTATGTATGTTTGGCACTATGGCACACTCAAGAAATATGAG
TTTGATGTTCAAAATAAGGTCTCCATCAACTGGATTTTGAGCTTAGGCCC
GAATCTGGGAATTGTTAGGGTCCGGGGTATTGGCCTTATACATACAGAGC
TAGTTTCTGGAATCCCAGCAATTTTCTCTCACTTTGTCACCAACCTTCCA
GCTTTTCACCAGGTTGTGGTCTTCCTCTGCATCAAATCAGTTCCAGTGCC
ACATGTCAGACCAGACGAAAGGTTCCTGGTGGG
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