FC920917

Overview
NameFC920917
Unique NameFC920917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:9..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 75/265 (28.30%), Postives = 104/265 (39.25%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------EGRL-----------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDRXFW 702
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GGP   F  GR D  EP +                            EG L           P+  QGN H        +++ F  +M ++D++ VAL +GGHT G+ H                                       SG EG WT  P  +  +YF  L   + + L++ P+    W
Sbjct:   91 PFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDDEGMARDMKETF-KRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWVSSHESGGIGEHAVTSGIEGAWTNTPREWTENYFRLLFDYDYE-LVKSPAGAWQW 353          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_ACIBL (Catalase-peroxidase OS=Acidobacteria bacterium (strain Ellin345) GN=katG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 74/239 (30.96%), Postives = 96/239 (40.17%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------EGRLPDAKQ--GNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYFTEL 648
            P  +R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG V +E  G     F  GR+D  EP +      EG+  D K+  G   L    GA QMGL                              +D++ VAL +GGHT G+ H                                       SG EG WT NP+ +DN +F  L
Sbjct:  104 PFFIRMAWHSAGTYRIGDGRGGAGSGEQRFAPLNSWPDNGNLDKARRLLWPIKQKYGRKLSWADLMVLAGNVALESMGFKTFGFAGGREDVWEPSEDIYWGPEGKWLDDKRYSGERDLENPLGAVQMGLIYVNPEGPNGKPDPAAAAVDIRETFARMAMNDEETVALIAGGHTFGKTHGAGVPTEYVGPEPEGAGIEEQGLGWKNKLGHGHGYHTITSGLEGAWTTNPIKWDNGFFDNL 342          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 61/179 (34.08%), Postives = 84/179 (46.93%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 573
            PL++R+AWHSAGTY ++   GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR D  EP ++                                        GR PD  +    +R+ F  +MG++D++ VAL +GGHT G+ H
Sbjct:   81 PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETF-KRMGMNDEETVALIAGGHTFGKTH 258          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_RHOBA (Catalase-peroxidase OS=Rhodopirellula baltica GN=katG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 75/258 (29.07%), Postives = 102/258 (39.53%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-------PQEGRLPDAKQGNDH---------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDRXFW 702
            PL +R+AWHSAGTY V    GG   GT R A   +   N  LD A RLL P K+++ + IS+ADL  L G   +E  G     F  GR+D  EP       P+   L D +   D                                  +R+ FG +M ++D++ VAL +GGHT G+ H                                       SG EG WT  P  + + YF E L G +  L++ P+    W
Sbjct:  200 PLFIRMAWHSAGTYRVSDGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGSKISWADLMVLTGNCALEDMGFETFGFAGGREDVWEPQKDVYWGPETEWLGDKRYSGDRDLQNPLAAVQMGLIYVNPEGPNGKPDPIAAAKDIRETFG-RMAMNDEETVALIAGGHTFGKAHGAASPDGNMGVEPEGEGLAAQGLGWINTHGTGNAGDTITSGLEGAWTSTPAEWSHGYF-ENLFGYEWKLVKSPAGAWQW 455          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_DESAA (Catalase-peroxidase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=katG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14
Identity = 63/184 (34.24%), Postives = 86/184 (46.74%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE-----------------------------------GRL---PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 573
            PL +R+AWHSAGTY +    GG   G+ RLA   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G P   F  GR+D  EP Q+                                   G +   P+   GN         +R+ F A+M ++D++ VAL +GGHT G+CH
Sbjct:   89 PLFIRMAWHSAGTYRMGDGRGGAGSGSQRLAPLNSWPDNVNLDKARRLLWPIKQKYGKRISWADLMVLAGNCAIESMGLPTFGFAGGREDVWEPEQDVYWGSEEEWLATSDKPKSRYSGERDLENPLAAVQMGLIYVNPEGPDGNPDPIASGKDVRETF-ARMAMNDEETVALVAGGHTFGKCH 271          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_PSEMY (Catalase-peroxidase OS=Pseudomonas mendocina (strain ymp) GN=katG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 74/259 (28.57%), Postives = 105/259 (40.54%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRL--------PDAKQGND--HLRQVFGA-------------------------------QMGLSDKDIVAL-SGGHTLGRCH-----------------------------------KERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDRXFWM 705
            P  +R+AWHSAGTY     + GG  G  R A   +   N  +D + RLL P K+++  +IS+ADLY LAG V +E  G     F  GR+D  EP Q+            D K+ ND   L   FGA                               +M ++D++IVAL +GGHT G+ H                                      SG E  WT+ P ++ N++F  L   E + L + P+    W+
Sbjct:   84 PQFIRMAWHSAGTYRTTDGRGGGGRGQQRFAPLNSWPDNVNIDKSRRLLWPIKQKYGQSISWADLYILAGNVALESMGFRTFGFGAGREDVWEPDQDVNWGAEVAWLGVDPKRVNDERELTAPFGATHMGLIYVNPEGPNASGDYLAAAKDIRATFYRMAMNDEEIVALIAGGHTFGKAHGAAPESHKGPEPEGAPIEAQGLGWTSNFGSGFGKDTVSSGLEVTWTKTPALWSNNFFENLFKFEWE-LTKSPAGAKQWV 341          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_MARMS (Catalase-peroxidase OS=Marinomonas sp. (strain MWYL1) GN=katG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 70/240 (29.17%), Postives = 93/240 (38.75%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----------------------------------------EGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTEL 648
            P  +R+AWHSAGTY      GG   GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G     F  GR D  +P +                                         EG+ PD       +R  FG +M ++D++ VAL +GGHT G+ H                                      SG EG WT++P+ +DN YF  L
Sbjct:   96 PFFIRMAWHSAGTYRTADGRGGATSGTQRFAPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMILAGNCALESMGFKTFGFAGGRVDVWQPEEDIYWGTEKTWLDDERYTGDRELENPLAAVQMGLIYVNPEGPEGK-PDTLASARDIRDTFG-RMAMNDEETVALIAGGHTFGKAHGAGDAAQVGADPEAAGIAEQGFGWSNSMGTGKGVDTISSGLEGAWTKSPIAWDNGYFENL 333          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_COLP3 (Catalase-peroxidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 71/240 (29.58%), Postives = 97/240 (40.42%), Query Frame = 1
Query:  166 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-----------------PQEGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVA-LSGGHTLGRCHKER------------------------------------SGFEGPWTRNPLIFDNSYFTELL 651
            PLM+R+AWHSAG Y V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  L+G V +E  G     F  GR D  EP                  ++G+L                      PD     + +R  FG +M ++D++IVA L+GGHTLG+ H  +                                    SG EG WT  P  + ++Y   L+
Sbjct:   99 PLMIRMAWHSAGVYRVHDGRGGASGGQQRFAPLNSWPDNVNLDKARRLLWPVKQKYGRKISWADLMVLSGNVALESMGFKTFGFAGGRTDDWEPDLVYWGPETAMLSDKRRDKKGKLKGPLAAVEMGLIYVNPEGPHGKPDPLLAANDIRMSFG-RMAMNDEEIVALLAGGHTLGKAHGAKKPNGCVGAEPAAADIEAQGLGWKNKCGTGVGADTISSGLEGAWTVTPTQWSSNYLDNLM 337          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG_SYNPW (Catalase-peroxidase OS=Synechococcus sp. (strain WH7803) GN=katG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 73/256 (28.52%), Postives = 99/256 (38.67%), Query Frame = 1
Query:  169 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------GRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDRXFW 702
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K ++   IS+ADL  L+G V +E  G     F  GR+D  +P ++                  G L                      PD       +R+ F A+MG++ ++ VAL +GGHT G+CH                                      SG EG W  NP  +D  YF  + T E + L + P+    W
Sbjct:   89 LFIRLAWHSAGTYRTGDGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKRKYGNAISWADLIILSGNVALESMGFRTFGFAGGREDIWQPEEDVFWGKETGWLKDERRNDKGELNQPLAAVEMGLIYVNPEGPHGEPDPVASGRDVRETF-ARMGMTVEETVALVAGGHTFGKCHGAAPDSHLEAEPEGAALHEQGLGWRNTYESGKGEHTITSGIEGAWKPNPTRWDQGYFQMMFTYEWE-LTKSPAGAWQW 342          
BLAST of FC920917 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPN (Catalase-peroxidase 2 OS=Legionella pneumophila GN=katG2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 1
Query:  157 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKERSG-FEGP 600
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH  G+ H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
The following BLAST results are available for this feature:
BLAST of FC920917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
KATG_SPHAL1.672e-1428.30Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]
KATG_ACIBL1.672e-1430.96Catalase-peroxidase OS=Acidobacteria bacterium (st... [more]
KATG_SYMTH2.184e-1434.08Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_RHOBA4.865e-1429.07Catalase-peroxidase OS=Rhodopirellula baltica GN=k... [more]
KATG_DESAA4.865e-1434.24Catalase-peroxidase OS=Desulfatibacillum alkenivor... [more]
KATG_PSEMY6.354e-1428.57Catalase-peroxidase OS=Pseudomonas mendocina (stra... [more]
KATG_MARMS8.298e-1429.17Catalase-peroxidase OS=Marinomonas sp. (strain MWY... [more]
KATG_COLP31.849e-1329.58Catalase-peroxidase OS=Colwellia psychrerythraea (... [more]
KATG_SYNPW2.414e-1328.52Catalase-peroxidase OS=Synechococcus sp. (strain W... [more]
KATG2_LEGPN2.414e-1331.94Catalase-peroxidase 2 OS=Legionella pneumophila GN... [more]

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Properties
Property NameValue
Genbank descriptionC32014G07EF RVDevelop1 Citrus clementina cDNA clone C32014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920917 ID=FC920917; Name=FC920917; organism=Citrus clementina; type=EST; length=705bp
GCTCGTGCCACTTTCGTTTGTTAAGGATTTGCGTCTCTCTTTCTCATTTC
ATTCAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAGCGAGGATT
ACAAGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCT
GAGAAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCACTCAGCTGG
TACATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAACCATGAGGC
TCGCTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATATTGCCGTT
AGGCTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCCTACGCTGA
CCTTTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCG
ATATCCCCTTCCACCCTGGAAGAGATGACAAGGCTGAGCCACCTCAAGAA
GGCCGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGGCAAGTCTT
TGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCTCTCTGGTG
GCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGACCA
TGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACGGAGCTCTT
GACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGACAGGNCCTTCT
GGATG
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