FC920925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 187 LNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEE-VAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 L +F+ A+ L K +DF G A+D T +N+ AF RI RPR L DVS+ID TTI +I+API I+PTAFH +A +GE +TA+AA N V+S +S T+E+ VAA+ + ++QLYV DI +VQR E GFKALV+T D P LG R + Sbjct: 6 LADFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGN 168
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 75/174 (43.10%), Postives = 101/174 (58.05%), Query Frame = 1 Query: 181 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANP-EGEVATARAAASCNT-----IMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNK 684 +NL +F+ LA L K + +Y+ GA DE T +EN A+HRI F+P+ILVDV ++D+ST +L + P ++ TA KL NP EGE AR T I L+ S I E A S +++YQLYV R IT LV+ E+ G KAL +T D P LG+RE D+K K Sbjct: 203 INLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLK 376
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26 Identity = 66/173 (38.15%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 166 MAAEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNK 684 M+ N+ ++++L + LPKM YD+ GGAEDE+ +K N + F + F+P+ LVDVSR L +L + S P++I PT + P+G++A ARAA VLS S+ +IE++A + ++QLYV R+I +V +A G+ LVLT D G RE D+ N+ Sbjct: 1 MSQNLFNVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNR 172
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++E AR LP + + GGA EHT++ N++ + R R+L V +D+STT+ D +++ P+++AP + GEV ARAA + LS S IEEV A+SN ++QLYV + R ++RA G + LV T D P G R D Sbjct: 8 DYREAARRRLPPFLFHYIDGGAYSEHTMRRNIDDLADLALRQRVLKSVGTVDISTTLFDEELAMPVVLAPVGLTGMYARRGEVQAARAAEKKGIPLTLSTVSVCPIEEVQAASNRPIWFQLYVLRDRGFMKNALERAWAAGIRKLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 57/168 (33.93%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 181 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEE-VAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKN 681 + + + + +A+ P+ +D+ GGAEDE ++ + F I F P IL DV+ + +L P IAPT F +L + EGE+A ARAAA+ LS ++ IE+ V A +++QLY+++ RD + LV+R GF +++T D P G R D++N Sbjct: 35 LTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRN 202
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 57/161 (35.40%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 190 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 ++++ A+ LP+ +D+ GGA EHTL+ N I+ R R+L +V + L T + ++ PII++P + GEV ARAAA+ LS S +IEEVA+ S+ ++QLYV K R ++RA+ G LV T D P G R D Sbjct: 7 SDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 56/161 (34.78%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 190 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 ++++ A+ LP+ +D+ GGA EHT++ N I+ R RIL +V + L TT+ ++ P+I++P + GEV A+AAA+ LS S IEEVA+ S ++QLYV K R ++RA+ G LV T D P G R D Sbjct: 7 SDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_CAUSK (L-lactate dehydrogenase [cytochrome] OS=Caulobacter sp. (strain K31) GN=lldD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21 Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +F+E AR LP+ +D+ GGA E TL NV I+ R R+L DVSR+ TT+ + + P+ +AP + GEV ARAAA+ LS S + EV+ +S+A ++QLY+ + R L+ RA G ALV T D P G R D Sbjct: 8 DFREAARRQLPRFLFDYIDGGAYAERTLARNVSDLADISLRQRVLKDVSRVSTRTTLFGVEQTLPVALAPVGLTGMYARRGEVQAARAAAAKGVPFCLSTVSVCDLAEVSRASSAPIWFQLYMLRDRGFMRDLLARAADAGATALVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPK (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain KT2440) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 58/160 (36.25%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP + GEV ARAAA+ +S S IEEVA + N ++QLYV K R ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + LST + D +S P+ +AP + GEV ARAAA+ +S S IEEVA + + ++QLYV K R ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRD 167 The following BLAST results are available for this feature:
BLAST of FC920925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920925 ID=FC920925; Name=FC920925; organism=Citrus clementina; type=EST; length=698bpback to top |