FC920925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 58/160 (36.25%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP + GEV ARAAA+ +S S IEEVA + N ++QLYV K R ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLNNMSELSLETKLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAINRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCR (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +F+E AR LP+ +D+ GGA E T+ N++ I R R+L+DVS +D STT+ + + P+ +AP + GE ARAAA+ LS S ++EV A+S ++QLYV + R L+ RA G LV T D P G R D Sbjct: 8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_CAUCN (L-lactate dehydrogenase [cytochrome] OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=lldD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21 Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +F+E AR LP+ +D+ GGA E T+ N++ I R R+L+DVS +D STT+ + + P+ +AP + GE ARAAA+ LS S ++EV A+S ++QLYV + R L+ RA G LV T D P G R D Sbjct: 8 DFREAARRRLPRFLFDYIDGGAYAERTMARNIDDLADIALRQRVLMDVSVVDPSTTLFGVRQALPVALAPVGLTGMYARRGECQAARAAAAKGVPFCLSTVSVCDVDEVRAASATPFWFQLYVLRDRGFMRDLLARASAAGATTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ N I R RIL ++S + L T + K++ P+++AP + GEV ARAAA LS S IEEVA + + ++QLYV K R + ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRRLPPFLFHYIDGGAYGEHTLRRNTADLADIALRQRILKNMSDLSLETQLFGEKLAMPVVLAPVGLTGMYARRGEVQAARAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRSALERAQAAGVKTLVFTVDMPTPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 58/161 (36.02%), Postives = 82/161 (50.93%), Query Frame = 1 Query: 190 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 ++++E AR LP + + GGA E TL+ NVE + R R+L V +DLSTT+L ++S P+ +AP + GEV A+AA LS S +IEEV + ++QLYV K R ++RA G + LV T D P G R D Sbjct: 7 SDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP + GEV ARAAA+ +S S IEEVA + + ++QLYV K R ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLAGIALRQRVLKNMSELSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 199 QELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTAD 642 Q+ A+ LPK Y +E T+ +NV AF + F P ++ + DLSTT++ ++S P+II+PT + +P GEVA ARAAA+ T+M LS +S IEEV A +N F+Q+Y RD A V+RA + G LV+T D Sbjct: 13 QQRAKRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGV-QAVDPGGEVAVARAAAARGTVMGLSSFASKPIEEVIA-ANPKTFFQVYWQGGRDALAERVERARQAGAVGLVVTTD 158
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + L T + D +S P+ +AP + GEV ARAAA+ +S S IEEVA + + ++QLYV K R ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLKNMSDLSLETRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 57/160 (35.62%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A+ LP + + GGA EHTL+ N E I R RIL ++S + L T++ K++ P+I+ P + GEV A+AAA LS S IEEVA + + ++QLYV K R ++RA+ G K LV T D P G R D Sbjct: 8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRD 167
BLAST of FC920925 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 58/160 (36.25%), Postives = 82/160 (51.25%), Query Frame = 1 Query: 193 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHKLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREAD 672 +++ A LP + + GGA EHTL+ NV I R R+L ++S +DLST + K+S P+ +AP + GEV A+AAA+ LS S IEEVA + + ++QLYV K R ++RA+ G LV T D P G R D Sbjct: 8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRD 167 The following BLAST results are available for this feature:
BLAST of FC920925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920925 ID=FC920925; Name=FC920925; organism=Citrus clementina; type=EST; length=698bpback to top |