FC920926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15 Identity = 48/162 (29.63%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 +KLV+VGDGG GK+ + + F +Y+PTI G + DTAGQE++ +R+ Y G+ ++++++T+R ++ + T+++ + RV + P+VL NK D++ +V +A+ + + Y E SAK N E+ F L R + Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB12_RAT (Ras-related protein Rab-12 (Fragment) OS=Rattus norvegicus GN=Rab12 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15 Identity = 46/153 (30.07%), Postives = 84/153 (54.90%), Query Frame = 1 Query: 118 VGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVK-NRQVKAKQVTFHRKK--NLQYYEISAKSNYNFEKPFLYL 564 +G G GKT+ ++R F + + T+GV+ KIR WDTAGQE+F + YY + I+++D+T + T+ ++P W + + + E+ ++L GNK+D + +R++ +Q ++ ++ E SAK N+N ++ FL L Sbjct: 1 IGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLAGNKLDCETDREISRQQGEKFAQQITGMRLSEPSAKDNFNVDEIFLKL 153
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKN--------RQVKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 555 KLVIVGDG GKT + G+F + Y PT+ E + D + ++ WDTAGQE + LR Y +I F + + +NV W ++ C+ +PI+L G KVD++N RQ + VT +++ YYE SAK+ Y + F Sbjct: 12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 54/179 (30.17%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAKQV-TFHRKKNLQYYEISAKS---NYNFEKPFLYLARKLAGDPNLHFVESP 612 FK++++GD GKT R G F + E TIGV+ + +I+ WDTAGQE+F + YY + + ++D+T ++ ++P W + C+ + +IP +L GNK D+++ QV F ++ +E SAK+ N + E F+ LA KL L + P Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEE-CKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQLP 211
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RASD_DICDI (Ras-like protein rasD OS=Dictyostelium discoideum GN=rasD PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 +KLVIVG GG GK+ + + F +Y+PTI + + + DTAGQE++ +RD Y GQ + ++ +T+R +Y + ++ + RV + +P++L GNK D+ + RQV + + N + E SAKS N E+ F L R++ Sbjct: 4 YKLVIVGGGGVGKSALTIQLIQNHFIDEYDPTIE-DSYRKQVSIDDETCLLDILDTAGQEEYSAMRDQYMRTGQGFLCVYSITSRSSYDEIASFREQILRVKDKDRVPLILVGNKADLDHERQVSVNEGQELAKGFNCPFMESSAKSRINVEEAFYSLVREI 164
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAP1B_DANRE (Ras-related protein Rap-1b OS=Danio rerio GN=rap1b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 +KLV++G GG GK+ + + G F +KY+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++P++L GNK D+++ +V K Q + + + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 47/160 (29.38%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQV-KAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 576 K ++ G GK++ + + EF + + TIGVE + KI+ WDTAGQE F + YY A++ +D+T R +++ + W ++ ++ NI I L GNK D K+++V ++ + K+N + ++E SAK + E F +++K+ Sbjct: 7 KCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSPNIVIALIGNKCDCKDKRVITTEEGAKNAKENDILFFETSAKDYESVESVFDGVSKKV 166
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB38_MOUSE (Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH-PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD-----VKNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARK-LAGDPNLHFVESPALAPPEV 633 +KL+++GD G GKT+ +KR++ F Y TIGV+ + + +R WD AGQE+FG + YY A I+FDVT T++ V W DL + + +VL NK D + N +K Q F ++ + ++E SAK N N ++ L + LA + +L P + P + Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQ--FCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLLESIEPDIVKPHL 197
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB38_HUMAN (Ras-related protein Rab-38 OS=Homo sapiens GN=RAB38 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 59/190 (31.05%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH-PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVD-----VKNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARK-LAGDPNLHFVESPALAPPEV 633 +KL+++GD G GKT+ +KR++ F Y TIGV+ + + +R WD AGQE+FG + YY A I+FDVT T++ V W DL + + +VL NK D + N +K Q F ++ + ++E SAK N N ++ L + LA + +L P + P + Sbjct: 10 YKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQ--FCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDLMESIEPDVVKPHL 197
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: YPT7_YEAST (GTP-binding protein YPT7 OS=Saccharomyces cerevisiae GN=YPT7 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14 Identity = 48/166 (28.92%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR-FYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCENI------PIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLAR 570 K++I+GD G GKT+ + R++ ++ ++Y+ TIG + + + K+ WDTAGQE+F L +Y ++++DVT +++N+ +W RD V N+ P V+ GNK+D + + K+ Q ++ + SAK+ N + F +AR Sbjct: 10 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSW-RDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIAR 174 The following BLAST results are available for this feature:
BLAST of FC920926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920926 ID=FC920926; Name=FC920926; organism=Citrus clementina; type=EST; length=689bpback to top |