FC920926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 582 FKLV +GD GKT+ + R + +F+ Y+PTIG++ + +R WDTAGQE+F L Y AI+++DV+ R T+ N W D+ R N+ IVL GNK D V+ RQV + K+ + + E SAK N+N + F +A L G Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 70 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 555 +P ++ +Y FK+VI+GD GK+ + R EF +K + TIGV+ + I CWDTAGQE+F + GYY A+I++D+T+++++KNV W +L + E +I I++ GNK D++ +R+V K+ F + + E SA ++ N + F Sbjct: 1 MPQEEEAEY-LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSF 164
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB19_XENLA (Ras-related protein Rab-19 OS=Xenopus laevis GN=rab19 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 62/191 (32.46%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRV-CENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHF-----------VESPALAPPE 630 FK++++GD GKT V R +G F + TIGV+ N K++ WDTAGQE+F + YY AII +D+T R ++++VP W + + N+ ++L GNK D+ + RQ+ ++ +K+ L E SAK ++N ++ FL +A++L H+ P LAPPE Sbjct: 16 FKIILIGDSNVGKTCVVHRFQSGIFMDNQQNTIGVDFTVRSLNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAGKYGAANLMLMLMGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHNESPRNSFILDSKPVLAPPE 206
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 585 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 585 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLCRVCEN-IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD 585 FK+V++G+ G GKT V+R G F TIGV+ N K++ WDTAGQE+F + YY I+ +D+T +++ +P W R++ + N + VL GNK+D+ R+ ++Q F +++ Y E SAK + N EK FL LA +L + Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 173
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20 Identity = 59/160 (36.88%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 106 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 576 K+V++G GKT R++ G F K+ TIG KI++ WD+AGQ++F L YY AI++FD+T + T+ V W +L + E I +VLCGNK+D+ +NRQVK++ + + N Y E SAK N E FL + +KL Sbjct: 11 KVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20 Identity = 55/178 (30.90%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAG--DPNLHFVES 609 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N Y+E SAK + N F R++ D + H +++ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLIQT 185
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20 Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 576 FKL+++GD G GKT + R F + TIG+++ KI+ WDTAGQE+F + YY ++++D+T +++N+ W R++ E++ +L GNK D+++++V KAK R+ ++++E SAK+N N EK FL LA + Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
BLAST of FC920926 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20 Identity = 55/178 (30.90%), Postives = 93/178 (52.25%), Query Frame = 1 Query: 103 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQFAIIMFDVTARLTYKNVPTWHRDL-----CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKN--LQYYEISAKSNYNFEKPFLYLARKLAG--DPNLHFVES 609 FK++++GDGG GK++ + R++T +F+ + TIGVE D + + WDTAGQE+F LR +Y ++ F V +++N+ W ++ + E+ P V+ GNK D+K RQV ++ K N Y+E SAK + N F R++ D + H +++ Sbjct: 8 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQT 185 The following BLAST results are available for this feature:
BLAST of FC920926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920926 ID=FC920926; Name=FC920926; organism=Citrus clementina; type=EST; length=689bpback to top |