FC920931

Overview
NameFC920931
Unique NameFC920931
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: AGLU_SPIOL (Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.848e-16
Identity = 61/215 (28.37%), Postives = 96/215 (44.65%), Query Frame = 3
Query:   42 IPYDVLWLDIAHTDGKKYFTWDRLSFP--HPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVF-NGPEV------------------------TMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            IP +V+W DI + D  K FT D ++FP    ++    L   G+  V I+DP I  + +Y  +    +   ++K    + Y G  WPG   + D L P   T+W  +   + ++   P   +W DMNE S F + P +                        T+P  A+H   +    +HN +GY     T   L+K    + RPFVL+R+ F+GS
Sbjct:  345 IPLEVMWTDIDYMDAYKDFTLDPVNFPLDKMKKFVNNLHKNGQKYVVILDPGISTNKTYETYIRGMKHDVFLK-RNGKPYLGSVWPGPVYFPDFLKPSALTFWTDEI--KRFLNLLPVDGLWIDMNEISNFISSPPIPGSTLDNPPYKINNSGVMLPIINKTIPPTAMHYGDIPEYNVHNLFGYLEARVTRAALIKLT--EKRPFVLSRSTFSGS 554          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: MGA_HUMAN (Maltase-glucoamylase, intestinal OS=Homo sapiens GN=MGAM PE=1 SV=5)

HSP 1 Score: 82.8037 bits (203), Expect = 1.748e-15
Identity = 67/218 (30.73%), Postives = 96/218 (44.04%), Query Frame = 3
Query:   42 IPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDS----YWLHNEATEKGYYVKDAT-KRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVF-------------NGPEVTMPR--------DALHLDRVEH----RELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            +PYDV   DI + D ++ FT+D + F    E   +L   G+ +V IVDP I  + S    Y  ++  ++   +V  +       G  WPG + + D  NP    WW  +F  E +        IW DMNE S F             N P  T PR          L +D V+H     ++HN YGY   +AT++   K      R F+L R+ FAGS
Sbjct:  405 LPYDVQHADIDYMDERRDFTYDSVDFKGFPEFVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEF--ELFHNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPPFT-PRILDGYLFCKTLCMDAVQHWGKQYDIHNLYGYSMAVATAEA-AKTVFPNKRSFILTRSTFAGS 618          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: AGLU_HORVU (Alpha-glucosidase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.895e-15
Identity = 68/229 (29.69%), Postives = 103/229 (44.98%), Query Frame = 3
Query:    3 DVELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPE--EMQRKLATKGRHMVTIVDPHIKRDD---SYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRD-----------------------ALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            D+E V ++  +  IP +V+W DI + DG K FT DR++F   E      +L    +  V I+DP I+ D    +Y       ++  ++K     ++ G  WPG   + D ++P    +W  + S   +  + P   +W DMNE S F  PE     D                       A+H   V   E HN +G     AT  G+L R+ G+ RPFVL+R+ F GS
Sbjct:  301 DLERVVARYAKARIPLEVMWTDIDYMDGFKDFTLDRVNFTAAELRPFVDRLHRNAQKYVLILDPGIRVDPIDATYGTFVRGMQQDIFLK-RNGTNFVGNVWPGDVYFPDFMHPAAAEFWAREISL--FRRTIPVDGLWIDMNEISNFYNPEPMNALDDPPYRINNDGTGRPINNKTVRPLAVHYGGVTEYEEHNLFGLLEARATGRGVL-RDTGR-RPFVLSRSTFVGS 524          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: AGLU_MUCJA (Alpha-glucosidase OS=Mucor javanicus PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14
Identity = 44/143 (30.77%), Postives = 75/143 (52.45%), Query Frame = 3
Query:    6 VELVDSKIDEHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEE--MQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVF 428
            VE V  K  E +IP   +W+DI + +  K FT+D+++FP      +  +L   G++ V +VDP I  + +Y  +   TE   ++K+A   D+ G  WPG +++ D  +P    +W  +    ++V       +W DMNEP+ F
Sbjct:  297 VETVKRKYKEANIPLQTVWVDIDYMEETKDFTFDKVNFPQDRMIGLGEQLHKDGQNYVVMVDPAISANTTYEPYVRGTEMDVWIKNADGSDFIGSVWPGFTTFPDWWHPNATKYWNKEII--DFVDMLGVDGLWIDMNEPASF 437          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: XYL1_ARATH (Alpha-xylosidase OS=Arabidopsis thaliana GN=XYL1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14
Identity = 67/255 (26.27%), Postives = 103/255 (40.39%), Query Frame = 3
Query:    3 DVELVDSKIDEHD---IPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQ--RKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPR-------------------------------------------------DALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            ++ +V+  +D +    IP DV+W D  H DG K FT + +++P  + +    K+   G   + I DP I  + SY     A     ++K   K  +    WPG   + D LNP+  +WWG +   + +    P   +W DMNE S F     T+P                                                   A H + V   + H+ YG+   +AT  GLL  + GK RPF+L+R+ F GS
Sbjct:  304 NLSVVEDVVDNYKKAKIPLDVIWNDDDHMDGHKDFTLNPVAYPRAKLLAFLDKIHKIGMKYIVINDPGIGVNASYGTFQRAMAADVFIKYEGK-PFLAQVWPGPVYFPDFLNPKTVSWWGDEI--KRFHDLVPIDGLWIDMNEVSNFCSGLCTIPEGKQCPSGEGPGWVCCLDCKNITKTRWDDPPYKINATGVVAPVGFKTIATSATHYNGVREYDAHSIYGFSETIATHKGLLNVQ-GK-RPFILSRSTFVGS 553          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: AGLU_SCHPO (Alpha-glucosidase OS=Schizosaccharomyces pombe GN=agl1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.122e-13
Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 3
Query:   39 DIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQR---KLATKGRHMVTIVD-------PHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYV----GSTPSLYIWNDMNEPSVF 428
            DIP +  W DI + +  + FT D +S+    +MQ     L +  +H V I+D       P+   DDSY+ +    EK  ++K+     Y G  WPG +++ D  NP++  +W        Y     G+ P   IW DMNEPS F
Sbjct:  346 DIPVETFWSDIDYMEKYRDFTVDPVSYSK-SDMQTFFSDLVSNHQHYVPIIDAAIYAANPYNHTDDSYYPYYAGVEKDIFLKNPNGSIYIGAVWPGFTAFPDFTNPDVVDYWKDCLINLTYAFGSNGTVPFSGIWTDMNEPSSF 488          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: SUIS_RAT (Sucrase-isomaltase, intestinal OS=Rattus norvegicus GN=Si PE=1 SV=5)

HSP 1 Score: 73.559 bits (179), Expect = 1.061e-12
Identity = 66/223 (29.60%), Postives = 96/223 (43.05%), Query Frame = 3
Query:   33 EHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHI---KRDD--SYWLHNEATEKGYYVKDAT-KRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPS---------------VFNGPEVT-------MPRDALHLDRVEH----RELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            E  IPYD    DI + +  K FT+DR+ F    E  + L   G++++ I+DP I   KR +   Y  +    EK  +V ++       G  WPG + Y D  NP+   WW  + +  +       L  W DMNE S               V N P  T       M    L +D V+H     ++H+ YGY   +AT    ++R     R F+L R+ F GS
Sbjct:  387 EAGIPYDAQVTDIDYMEDHKEFTYDRVKFNGLPEFAQDLHNHGKYII-ILDPAISINKRANGAEYQTYVRGNEKNVWVNESDGTTPLIGEVWPGLTVYPDFTNPQTIEWWANECNLFHQQVEYDGL--WIDMNEVSSFIQGSLNLKGVLLIVLNYPPFTPGILDKVMYSKTLCMDAVQHWGKQYDVHSLYGYSMAIATEQA-VERVFPNKRSFILTRSTFGGS 605          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: SUIS_HUMAN (Sucrase-isomaltase, intestinal OS=Homo sapiens GN=SI PE=1 SV=5)

HSP 1 Score: 69.707 bits (169), Expect = 1.532e-11
Identity = 61/221 (27.60%), Postives = 93/221 (42.08%), Query Frame = 3
Query:   33 EHDIPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIK-----RDDSYWLHNEATEKGYYVKDAT-KRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVF-------------NGPEVT-------MPRDALHLDRVEH----RELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            E  IP+D    DI + + KK FT+D+++F    +  + L   G+  V I+DP I         +Y  +     +  ++ ++       G  WPG + Y D  NP    WW  + S  +       L  W DMNE S F             N P  T       M    + +D V++     ++H+ YGY   +AT   + K    K R F+L R+ FAGS
Sbjct:  377 EAGIPFDTQVTDIDYMEDKKDFTYDQVAFNGLPQFVQDLHDHGQKYVIILDPAISIGRRANGTTYATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGL--WIDMNEVSSFIQGSTKGCNVNKLNYPPFTPDILDKLMYSKTICMDAVQNWGKQYDVHSLYGYSMAIATEQAVQKVFPNK-RSFILTRSTFAGS 594          
BLAST of FC920931 vs. ExPASy Swiss-Prot
Match: SUIS_RABIT (Sucrase-isomaltase, intestinal OS=Oryctolagus cuniculus GN=SI PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11
Identity = 62/222 (27.93%), Postives = 98/222 (44.14%), Query Frame = 3
Query:   42 IPYDVLWLDIAHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIK-----RDDSYWLHNEATEKGYYVKDAT-KRDYDGWCWPGSSSYLDMLNPEIRTWWGTK---FSYE-NYVGSTPSLYIWNDMNEPSVF-------------NGP-------EVTMPRDALHLDRVEH----RELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS 605
            IP+D    DI + + KK FT+DR+++    +  + L   G+  V I+DP I        ++Y  ++    +  +V ++       G  WPG + Y D  +P    WW  +   F  E NY G      +W DMNE S F             N P       +  M    L +D V++     ++H+ YGY   +AT +  ++R     R F+L R+ FAGS
Sbjct:  380 IPFDTQVSDIDYMEDKKDFTYDRVAYNGLPDFVQDLHDHGQKYVIILDPAISINRRASGEAYESYDRGNAQNVWVNESDGTTPIVGEVWPGDTVYPDFTSPNCIEWWANECNIFHQEVNYDG------LWIDMNEVSSFVQGSNKGCNDNTLNYPPYIPDIVDKLMYSKTLCMDSVQYWGKQYDVHSLYGYSMAIAT-ERAVERVFPNKRSFILTRSTFAGS 594          
The following BLAST results are available for this feature:
BLAST of FC920931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
AGLU_SPIOL7.848e-1628.37Alpha-glucosidase OS=Spinacia oleracea PE=1 SV=1[more]
MGA_HUMAN1.748e-1530.73Maltase-glucoamylase, intestinal OS=Homo sapiens G... [more]
AGLU_HORVU3.895e-1529.69Alpha-glucosidase OS=Hordeum vulgare PE=2 SV=1[more]
AGLU_MUCJA1.480e-1430.77Alpha-glucosidase OS=Mucor javanicus PE=1 SV=1[more]
XYL1_ARATH9.594e-1426.27Alpha-xylosidase OS=Arabidopsis thaliana GN=XYL1 P... [more]
AGLU_SCHPO8.122e-1331.94Alpha-glucosidase OS=Schizosaccharomyces pombe GN=... [more]
SUIS_RAT1.061e-1229.60Sucrase-isomaltase, intestinal OS=Rattus norvegicu... [more]
SUIS_HUMAN1.532e-1127.60Sucrase-isomaltase, intestinal OS=Homo sapiens GN=... [more]
SUIS_RABIT2.613e-1127.93Sucrase-isomaltase, intestinal OS=Oryctolagus cuni... [more]

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Properties
Property NameValue
Genbank descriptionC32014H12EF RVDevelop1 Citrus clementina cDNA clone C32014H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920931 ID=FC920931; Name=FC920931; organism=Citrus clementina; type=EST; length=666bp
AGGATGTGGAGTTAGTGGATTCCAAAATCGATGAGCATGATATTCCTTAT
GATGTTTTGTGGCTGGATATTGCACATACAGATGGCAAGAAGTATTTTAC
TTGGGATAGGTTGTCGTTTCCACACCCGGAAGAGATGCAGAGAAAGTTGG
CTACCAAGGGTAGGCATATGGTAACGATTGTGGATCCACATATTAAGAGG
GATGATTCATATTGGTTGCATAATGAGGCAACCGAGAAAGGGTATTATGT
TAAAGATGCGACAAAGAGGGATTATGATGGATGGTGCTGGCCTGGTTCGT
CCTCATATTTGGATATGCTGAATCCAGAGATTCGGACTTGGTGGGGTACT
AAGTTCTCCTATGAAAATTATGTTGGTTCGACACCTTCGTTGTACATTTG
GAATGACATGAATGAGCCTTCTGTCTTTAATGGTCCAGAGGTGACAATGC
CGAGAGATGCTTTACATCTTGACCGTGTTGAACATCGAGAATTACATAAT
GCTTACGGTTATTACTTCCATATGGCTACATCTGATGGGCTTCTAAAGCG
TGAAAATGGCAAGGACCGGCCTTTTGTATTGGCAAGAGCATTCTTTGCTG
GAAGTCAAGGTATGGAGCAGTTTGGACAGGTGATAACACAGCAGAATGGG
AAACACTCANGGTTTC
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