FC920943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26 Identity = 73/217 (33.64%), Postives = 110/217 (50.69%), Query Frame = 3 Query: 60 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDY--KDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 S +D TIFSPEGR+YQVEYA +AI + +A+ + D V+ +K+V L+ T T +Y+I V C G++ DA I A+ +A + Y MP E L + + D Q YTQ +R G + LF +D G ++Y DP+G Y G K S L++ K +++ EA++LA++ L QT + S LE+ V Sbjct: 6 SAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT-SVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEAL-QTSLGIDVRSKDLEVVVV 220
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26 Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG---NYGGW 533 YD + FSP+GR++QVEYA +A+ NAG+ I I K+GVV+V +K ++SK L T + +M+ ++D+V AVAG D L N A +A ++ Y+EPMP++ + S+ + +T G RPFG F W+K G +L++ +PSG Y W Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSK-LYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAW 163
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA73_DROVI (Proteasome subunit alpha type-7-1B OS=Drosophila virilis GN=Pros28.1B PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25 Identity = 73/210 (34.76%), Postives = 110/210 (52.38%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 R+D I+S +G L QVEYA EA+ GS +G+ +K+ VVL EK+ L Q ++ K+ KID H+A AG+ +DA +L++ A+V+AQ + + P VE + + L KQ YTQ RPFGVS L G+D++ +L+ +DPSG Y W L+++ +A V+ +TSL +ELA Sbjct: 3 RFDESVNIYS-DGHLLQVEYAQEAV-RKGSTVGLRTKECVVLGVEKRAIDSL-QIERTSRKIKKIDQHMAMTFAGLTADARVLVSRAQVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLFQTDPSGIYYEWSANTTGRLGQTVNEYLEKNTAAISRTPDAASAMKHVVRALFTATSLDPASIELA 209
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25 Identity = 68/218 (31.19%), Postives = 115/218 (52.75%), Query Frame = 3 Query: 60 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDD---ISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 +R +D T+FSPEGRLYQVEYA +A NAG +++G+ K+ ++ +KKV KL+ ST + ++ I + C + G ++DA ++ AR +A + Y PMP + L + + + Q TQ +RP GV+ D G L+ DP+G Y G+K + L++ +K D + + V+ ++ L ++ ST S +L++ V Sbjct: 4 ARGFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDAST-VKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSL-STDFKSTELQIGVV 219
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.709e-25 Identity = 72/210 (34.29%), Postives = 114/210 (54.29%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 YD T FSP+GR++QVEYA +A+ N+G+ +GI KDG+VL EK VTSK++ S +++ + H AVAG+ +D +++ A+ +A Y Y EP+ V++L + T + LRPFG + G+D++ G QLYM +PSG +Y + I K + RE V++A K++ D + +LEL+ Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMM-LEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA-KIIYGVHDEAKDKAFELELS 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24 Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 YD T FSP+GR++Q+EYA +A+ N+G+A+GI KDG+VL EK + SK++ S +++ + H AVAG+ +D ++ A+ +A Y Y E +PV++L + T + LRPFG + G+D++ G QLYM +PSG +Y + I K + RE +++A K++ + D + +LE++ Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGIIEVA-KIIYKVHDEAKDKAFELEMS 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.789e-24 Identity = 60/157 (38.22%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 536 +YD+ TT +SP GRL+QVEYA EA+ N +A+G+ D VVL K+ + + S+ EK +K+D+HV A++G+++D L R + Y Y + P+ L + Q + QF G RPFGV L AG+D+ G +LY + PSG+ +K Sbjct: 5 QYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKR--NPVSGLSSYQEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQ-GPRLYQTVPSGDVFDFK 158
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24 Identity = 70/207 (33.82%), Postives = 109/207 (52.66%), Query Frame = 3 Query: 78 RTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAG-WDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDY-KDDISREEAVQLALKVLXQTMDSTSLTSDKLEL 692 ++ F+ EGRL QVE+A++ + AG+ IG + DGVVL+G K T+ EK+Y++ D + C + G+ DA L AR++AQ + P+ L + + KQ +TQ+ G RPFGVSFL+AG D Y L +DPSG WK LK D+ +D++ + A L++L + + +D+LE+ Sbjct: 7 KSNTFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEP-----TNGPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYA--LMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPEDEMDMKTATVEILRLLGKARELGPKEADRLEI 206
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24 Identity = 71/215 (33.02%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQ--DYKDDISREEAVQLALKVLXQTMD-STSLTSDKLELAEV 701 +YD T +SP+GRL+QVEYA+EAI + +G++SK VLV K+ +L S+ +K+ +IDDH+ A+AG+ DA +L N + +A + P+PV +L+ + + Q TQ G RP+GV FL G+D++ G L PSG + + +++ D D SREE + AL+ L T+ LT + + ++ + Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL---SSYQKKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDES-GPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVI 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA1_DROME (Proteasome subunit alpha type-1 OS=Drosophila melanogaster GN=Pros35 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.052e-24 Identity = 67/207 (32.37%), Postives = 110/207 (53.14%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKD--DISREEAVQLALKVLXQTMDSTSLTSD 680 +YDS T++SP+GRL+QVEYAMEA+ + +G+ +KD VLV K TS+L T K+ IDDH+ ++AG+ +DA +L R + Y ++Y PV +L+ +L + Q TQ RP+GV L AG+D+ G +Y PS + K + L+++ D S++E ++ ++ + T+ + D Sbjct: 5 QYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ---RKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDER-GPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILGTLPTDEQGKD 207 The following BLAST results are available for this feature:
BLAST of FC920943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920943 ID=FC920943; Name=FC920943; organism=Citrus clementina; type=EST; length=715bpback to top |