FC920943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.748e-41 Identity = 89/211 (42.18%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +D++ E ++LAL L +T + L + +++A V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYALSKTTE--ELKPENIDMAIV 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41 Identity = 90/209 (43.06%), Postives = 131/209 (62.68%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK GVV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +LYM++PSG Y ++ L+++YK+D++ E+ + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40 Identity = 87/209 (41.63%), Postives = 133/209 (63.64%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y ++++ E ++LAL L +T + L + +++A Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTE--ELKPENIDMA 214
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 89/211 (42.18%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ ARV+AQ +Y E + VE L + +CD KQ YT GG RPFG++ L G D+ + +L+ +DPSG +K IL++ Y +++S E ++LA+ L +T + L + +++A V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTE--ELKPENIDMAIV 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 88/211 (41.71%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD TIFSPEGRLYQVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y ++++ E ++LAL L +T + L + +++A V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYALSKTTE--ELKPENIDMAIV 216 The following BLAST results are available for this feature:
BLAST of FC920943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920943 ID=FC920943; Name=FC920943; organism=Citrus clementina; type=EST; length=715bpback to top |