FC920943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.968e-40 Identity = 89/209 (42.58%), Postives = 130/209 (62.20%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKLEL 692 YD TIFSP+G LYQV+YA EA+ +AIGI SK VV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YTQ GG+RPFGV+ + AG DK+ +L+M++PSG Y ++ L+++YK+D++ EE + LALK L T+ + LT + +E+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVP-KLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.154e-39 Identity = 87/211 (41.23%), Postives = 132/211 (62.56%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD TIFSPEGRLYQVEYA EA+ +A+GI DGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +++ E ++LAL L +T + L + +++A V Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTE--ELKPENIDMAIV 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39 Identity = 90/214 (42.06%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + D+S +EA +A+ +L Q M+ +T + +++A+V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.572e-39 Identity = 90/214 (42.06%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + DI+ +EA +A+ +L Q M+ +T + +++A+V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39 Identity = 83/200 (41.50%), Postives = 124/200 (62.00%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDS 662 RYD T+FSP+G L+QVEYAMEA+ +A+G+ D VVL EKK T KL Q S S K+ +DDH+A A AG+ +DA +L+N AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG + WK L+++YK + S +E V+LA++ L + ++S Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYK-ETSGQETVKLAIRALLEVVES 200
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39 Identity = 90/214 (42.06%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD FSPEGRL+QVEYA+EAI +AIG+ +KDGVVL EK+VTS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q++CD + + RPFGVS L AG D+N G LY +DPSG + S L++ Y +++ +EA +AL +L Q M+ +T + +++A+V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEE-KVTPNNVDIAKV 218
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 89/214 (41.59%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + D++ +EA +AL +L Q M+ +T + +++A+V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIAKV 218
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39 Identity = 83/207 (40.10%), Postives = 131/207 (63.29%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM-DSTSLTSDKL 686 YD T+FSP+GRL+QVEYA EA+ +A+GI KDGV L+ EKKV S+L++ TS EK+ IDD VA +G+++DA +LI+ AR+ Q+ Y M +E LV+ + D Q YTQ+GG+RP+GVS +FAG D + G +L+ DP+G +K + L+++YK+++S +EA+++ + L + D +S+ ++ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVE-KTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIRMGIAALKSAVADESSMKEPEI 212
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39 Identity = 85/211 (40.28%), Postives = 121/211 (57.35%), Query Frame = 3 Query: 51 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDK 683 P YD TIFSPEG LYQV YA EA+ +++GI + +GVV+ EK+ L+ +K+YKIDDH+ A AG+ D ILI+ ARV R+ Y EP PVE + + + D KQ YTQ GG+RPFGV+ +FAG + + ++Y +DP G Y +K + ++ Y+ D+S EEA +LALK+L + T +K Sbjct: 6 PPHQTAYDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDID-DIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEK 215
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38 Identity = 82/217 (37.79%), Postives = 134/217 (61.75%), Query Frame = 3 Query: 51 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 P S YD T+FSP+GRL+QVEYA EA+ +++G+ SK+G+VLV +K+ TSKL++ S EK+++ID+H+ A +G+++DA +I AR++AQ Y EP+ VE L + +CD KQ YTQ GG+RPFG + + G + G +L+ +DPSG +K ++ Y DD++ +A++LAL + + + + T + +E+A + Sbjct: 3 PLQSAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPK-SIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVN-GRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEATEGKT-TPESVEIAVI 216 The following BLAST results are available for this feature:
BLAST of FC920943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920943 ID=FC920943; Name=FC920943; organism=Citrus clementina; type=EST; length=715bpback to top |