FC920943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37 Identity = 79/197 (40.10%), Postives = 126/197 (63.96%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMD 659 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y E + VE + + +CD KQ YTQ+GG+RP+G + L AG D +L+ +DPSG +K + + DYK+D++ E A+ L + L + + Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAE-SIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAE 201
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37 Identity = 80/198 (40.40%), Postives = 124/198 (62.63%), Query Frame = 3 Query: 51 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 644 P+ YD T+FSP+GRLYQVEYA EA+ +A+GI + DGVVL+ +K+V+SKLL++S S EK++KID+H+ A +G++ DA L++ AR++ Q +Y E + VE L + LCD Q TQ+GG+RP+G + L AG +L+ +DPSG +K + +++Y D++ ++A+ L LK L Sbjct: 3 PQYQMGYDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESS-SIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGES-RLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKAL 198
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37 Identity = 78/197 (39.59%), Postives = 128/197 (64.97%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMD 659 YD T+FSP+GRL+QVEYA EA+ +A+G+ +GV+L+ +KKV S+L++ + S EK+ IDD+VA +G+++DA +L++ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+++ +EAV L +K L +++ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQN-SIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLE 202
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37 Identity = 78/197 (39.59%), Postives = 127/197 (64.47%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMD 659 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y E + VE + + +CD KQ YTQ+GG+RP+G + L AG D N +L+ +DPSG +K + + DY++D++ + A+ L + L + + Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAE-SIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAE 203
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.407e-37 Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDS 662 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK+ + +E V+LA++ L + ++S Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKL-QDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-AGQETVKLAIRALLEVVES 200
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.407e-37 Identity = 88/213 (41.31%), Postives = 128/213 (60.09%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELA 695 M Y T FSP G+L Q+E+A++A + GSAIGI +K+GVVL+ EKK+ S L TS +K+ I +++ AG+ D+ +LI AR ++++Y Y+E +PV QLV+ L Q +TQ GG+RPFGVS L AG+D+ G LY DPSG+Y WK + L++ Y DD+ E+A+Q AL + + + T LT +ELA Sbjct: 1 MDSDYSFSLTTFSPSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS--LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTALITIKEGFE-TQLTEFNMELA 209
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.144e-37 Identity = 83/204 (40.69%), Postives = 121/204 (59.31%), Query Frame = 3 Query: 57 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDD--ISREEAVQLALKVLXQTMDS 662 M+ RYD T+FSP+G L+QVEYA EA+ +A+GI KD VVL EKK +KL Q + K+ +D+HV A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK L+++Y D+ S +A++LA+K L + + S Sbjct: 1 MAARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKL-QEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQS 203
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.106e-37 Identity = 83/217 (38.25%), Postives = 130/217 (59.91%), Query Frame = 3 Query: 51 PKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDSTSLTSDKLELAEV 701 P + YD T+FSP+GRL+QVEYA EA+ ++IGI +G+VL +K+ TS L++ +TS EK++KID+H+ A +G+++DA L+ ARV+AQ Y EP+ V+ L + LCD Q YTQ GG+RPFG + + G +L+ +DPSG +K I + YKDD++ EA+ LAL + + + + T++ +E+A + Sbjct: 3 PLQNAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVE-ATSIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGI-CKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLALTAINEATEHET-TANNVEIAVI 216
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37 Identity = 75/196 (38.27%), Postives = 121/196 (61.73%), Query Frame = 3 Query: 69 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTM 656 YD TIFSP+G LYQV+YA EA+ + +G+ +K GVVL+GEK+ ++LL S EK++ +DDHV C+ AG+ SD ILI+ AR QA ++ Y EP+ ++ L + + D KQ YTQ GG+RPFGV+ + G D+ +L M++PSG + + +++Y++D++ ++ + L ++ L T+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVD-SIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALASTL 204
BLAST of FC920943 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSJ (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica GN=Os08g0548900 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37 Identity = 82/200 (41.00%), Postives = 121/200 (60.50%), Query Frame = 3 Query: 66 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDK-NYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLXQTMDS 662 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK L+++YK D S +E ++LA++ L + ++S Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-DTSGKETIKLAIRALLEVVES 200 The following BLAST results are available for this feature:
BLAST of FC920943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920943 ID=FC920943; Name=FC920943; organism=Citrus clementina; type=EST; length=715bpback to top |