FC920949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_COTJA (40S ribosomal protein S17 OS=Coturnix coturnix japonica GN=RPS17 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_CHICK (40S ribosomal protein S17 OS=Gallus gallus GN=RPS17 PE=2 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_CANFA (40S ribosomal protein S17 OS=Canis familiaris GN=RPS17 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.238e-14 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDPVAPGVEF 238 AG+ THLM RIQ GPVRGIS+KLQE ERERR ++VP+ SA+ + IEVD T +ML+ L + L P G+ F Sbjct: 51 AGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV-GMNF 128
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.685e-13 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQIEVDKATLDMLEALGMNEIPGLVRVDP 217 AG+ THLM R+++ VRGIS+KLQE ERERR ++VP SA++ D IEVD T +ML+ L + I GL P Sbjct: 51 AGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17_CAEEL (40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.363e-12 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQ---IEVDKATLDMLEALGMN 187 AG+ THLM RI+ GPVRGIS+KLQE ERERR +++P+ S + Q I+VD T DML+A G N Sbjct: 51 AGYITHLMRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGFN 115
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17B_YEAST (40S ribosomal protein S17-B OS=Saccharomyces cerevisiae GN=RPS17B PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.836e-12 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQ----IEVDKATLDMLEALGM 184 AG++THLM RIQ GPVRGIS KLQE ERER+ +VP+ SA+ + + VD T D++++LG+ Sbjct: 51 AGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115
BLAST of FC920949 vs. ExPASy Swiss-Prot
Match: RS17A_YEAST (40S ribosomal protein S17-A OS=Saccharomyces cerevisiae GN=RPS17A PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.836e-12 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 2 AGFSTHLMNRIQNGPVRGISLKLQEVERERRMDFVPDESAIKTDQ----IEVDKATLDMLEALGM 184 AG++THLM RIQ GPVRGIS KLQE ERER+ +VP+ SA+ + + VD T D++++LG+ Sbjct: 51 AGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGL 115 The following BLAST results are available for this feature:
BLAST of FC920949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920949 ID=FC920949; Name=FC920949; organism=Citrus clementina; type=EST; length=242bpback to top |