FC920963

Overview
NameFC920963
Unique NameFC920963
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 1
Query:   37 KMSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRE--SLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQT-GSGDRPLAEIRINRVTIHANP 510
            K   T+ TN G +   +  D  PKT  NF+ L  +G YD  +FHR I GFM+Q            S WG+ F DE  E  + KH++RG+LSMANSGP TNGSQFF ++   PHL+G +TV G+++ G E LD +E+      GDRP+ +I I  VT+  +P
Sbjct:  313 KAYATITTNFGPLNVELHGDRAPKTVYNFVQLAKAGKYDNVVFHRLIPGFMVQGGDPTGTGRGGESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPGGDRPVRDIVIQGVTVLQDP 473          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31
Identity = 69/147 (46.94%), Postives = 87/147 (59.18%), Query Frame = 1
Query:   43 SVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 483
            +V L T+LG I   +  +  PKT +NF  L   GYYDG IFHR I  F+IQ            SI+G KF+DEI   L H   GILSMAN+GPNTN SQFFI+ A  P L+G +T+ GRV+ G  V   M   +T S DRP+  ++I
Sbjct:    3 NVELQTSLGKILIELYTEHAPKTCQNFYTLAKEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neurospora crassa GN=cyp-1 PE=3 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31
Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            V + T +G     +  +  PKT +NF  L   GYYD T+FHR IK FMIQ            SI+G+KF DEI   LKH   G+LSMAN+GPNTNGSQFFI+ A  P L+G +T+ GRV  G  V+  M    T   DRP  E++I +  +
Sbjct:    5 VAVETTMGTFTLELYTNHAPKTCKNFATLADRGYYDSTVFHRIIKDFMIQGGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVKKGMGVIRRMGMVPTDKEDRPATEVKIVKARV 155          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31
Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            V   T++G     +     PKT +NF  L   GYY+  IFHR I  FM+Q            SI+G+KF DEIR  LKH   GILSMANSGPNTNGSQFF++ A  P L+G +T+ GRV  G  V+  M   +T   DRP+ E++I R  +
Sbjct:    5 VAFDTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKIIRARV 155          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31
Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            V   T++G     +  +  PKT  NF  L   GYY+  IFHR I  FM+Q            SI+G+KF DEI   LKH   G+LSMANSGPNTNGSQFFI+ A  P L+G +T+ GRV  G  V+  M   +T S DRP+ E++I R  +
Sbjct:    5 VVFDTSMGSFTVELYNEHAPKTCRNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDEVKIIRAKV 155          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31
Identity = 67/155 (43.23%), Postives = 86/155 (55.48%), Query Frame = 1
Query:   52 LHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 516
            + TN+GD+   +  +  PK   NF+ L  +GYY G  FHRNI  FMIQ            S+WGK F+DE    + HN RG LSMAN G NTN SQFF +Y   PHL+  +TV G+V+    VL  ME   T   +RPL +I I  + I  +P A
Sbjct:  327 METNMGDLTIELYPEFAPKAVWNFIKLSQTGYYKGVAFHRNIPNFMIQGGDPSGSGRGGQSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKMENVPTDGSNRPLNKILIKDIVILLDPFA 481          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPNG (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus niger GN=cypC PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.712e-30
Identity = 69/151 (45.70%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            V   T++G     +     PKT +NF  L   GYY+  IFHR I  FM+Q            SI+G+KF DEI  +LKH   GILSMANSGPN NGSQFFI+ A QP L+G +T+ GRV  G  V+  M   +T S DRP+  ++I R  I
Sbjct:    5 VAFDTSMGSFTVELYNAHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEINPNLKHTGAGILSMANSGPNNNGSQFFITLAPQPWLDGKHTIFGRVKSGMRVIQRMGLVKTNSEDRPVDGVKILRARI 155          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30
Identity = 67/151 (44.37%), Postives = 88/151 (58.28%), Query Frame = 1
Query:   46 VTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            VT  T++G     +     PKT  NF  L   GYY+G IFHR I  FMIQ            SI+G +F DEI   L+    GIL+MANSGPNTNGSQFFI+ A  P+L+G +T+ GRV  G + +  +E  +T   DRP+ EI+I+R  +
Sbjct:    9 VTFDTSVGSFTVELYTAHAPKTCNNFAKLAERGYYNGVIFHRIIPNFMIQGGDPTGTGRGGTSIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAVRTDKDDRPVEEIKIHRARL 159          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30
Identity = 72/158 (45.57%), Postives = 87/158 (55.06%), Query Frame = 1
Query:   52 LHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIH----GFEVLDLMEKAQTG-SGDRPLAEIRINRVTIHANP 510
            + T LGD+   +  +  PK   NF+ L   GYY    FHRNIKGFMIQ            SIWGK FNDE    LKH++RG LSMAN G NTN SQFFI+Y   PHLN  +T+ G VI         L+ ME      + +RP  +IRI  VTI  +P
Sbjct:  317 ISTTLGDVNLELHTEYAPKAVWNFIKLAKKGYYKDVTFHRNIKGFMIQGGDPTGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVIDDPTPSSPTLNNMETHPVNPTTNRPTPDIRIKDVTIFVDP 474          
BLAST of FC920963 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30
Identity = 69/155 (44.52%), Postives = 91/155 (58.71%), Query Frame = 1
Query:   34 GKMSVTLHTNLGDIKCGIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVLGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 498
            GK ++ +HT  GDI   +  +E PK  +NF     +GYYD TIFHR IK FMIQ            SIW K F DEI  +LKH+    +SMANSGPNTNGSQFFI+    P L+G +T+  R   G +V+  +E+ +T   DRPL   +I  ++I
Sbjct:  454 GKAAI-IHTTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKIINISI 607          
The following BLAST results are available for this feature:
BLAST of FC920963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 261
Match NameE-valueIdentityDescription
PPIL2_CRYNE2.641e-3143.48Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL1_SCHPO3.449e-3146.94Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL1_NEUCR3.449e-3145.03Peptidyl-prolyl cis-trans isomerase-like 1 OS=Neur... [more]
PPIL1_ASPOR3.449e-3145.03Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_ASPFU3.449e-3145.03Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL2_GIBZE4.504e-3143.23Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
PPIL1_ASPNG1.712e-3045.70Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_CRYNE3.813e-3044.37Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPIL2_ASPFU4.980e-3045.57Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
CYP9_SCHPO4.980e-3044.52Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]

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Properties
Property NameValue
Genbank descriptionC32201D07EF RVDevelopN Citrus clementina cDNA clone C32201D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920963 ID=FC920963; Name=FC920963; organism=Citrus clementina; type=EST; length=722bp
GATATAAATTCTGAGCTTTGGTTTGGCGTAGGCGGTAAGATGTCGGTAAC
TCTACACACTAATCTGGGTGATATTAAGTGCGGGATTGCTTGCGACGAAG
TCCCTAAGACGGCTGAGAATTTTTTGGCACTATGCGCGAGTGGTTACTAC
GATGGGACCATTTTTCACCGGAATATTAAAGGTTTTATGATTCAAGGTGG
AGACCCAACAGGCACTGGAAAAGGCGGAACAAGCATATGGGGCAAGAAGT
TCAATGATGAGATAAGGGAGTCCCTCAAGCATAATGCTAGAGGGATACTG
TCAATGGCCAATAGTGGCCCTAACACTAATGGAAGCCAATTCTTCATCTC
TTATGCAAAGCAGCCCCATCTTAACGGATTGTACACTGTGCTTGGTAGAG
TAATTCATGGGTTCGAAGTTCTTGACCTTATGGAAAAGGCTCAAACTGGA
TCAGGGGACCGGCCACTTGCGGAGATAAGGATCAATCGAGTTACCATACA
TGCTAACCCACTTGCTGTCTAGCTTTGTCTGAAAATTTCTTGTTGTATAA
CATTGTAAAGAGGCTTAGTGTGGAGTGGGAACAGTGACTTACGATTAAAC
TCCCAGTAGACTCTGTACATTTTTCTTTTCCCAGTTATGACTATGGGCTT
GAAGGAAGAAAGTACCGCAGAATTTTATGTAGCATCAAATGGTGAGATTG
ACGATTGAGAAACGTTAGTAAT
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