FC920982

Overview
NameFC920982
Unique NameFC920982
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_THEVO (Putative O-sialoglycoprotein endopeptidase OS=Thermoplasma volcanium GN=gcp PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 53/182 (29.12%), Postives = 92/182 (50.55%), Query Frame = 1
Query:  181 GAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSPCGNVMDRILSAYR 726
            GAE+R+  + F GR  V K R +K YR   LD +I  +R+  E   + + R  G+  P++Y  DP + TLT   ++G  ++D+               ++   +G+ +A +H   + HGDLT +N+++    +++  ID  +   +   ED AVD+Y LE ++ SL      +M     +YR
Sbjct:  336 GAESRIVNTDFYGRSAVKKIRIAKGYRLKELDERIRGERMKNEFTVIRRMRDAGICVPIVYDYDPFEKTLTLSQIQGELLRDVI----------RARPNVMGNVGHDVAVMHKNKISHGDLTVNNIIV---SDRICFIDASMGKVNAELEDLAVDVYTLEDSINSLSENGKTLMKEFKMSYR 504          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_METLZ (Putative O-sialoglycoprotein endopeptidase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=gcp PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17
Identity = 66/184 (35.87%), Postives = 94/184 (51.09%), Query Frame = 1
Query:  130 MEITANSEDGSLILIKQG--AEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLS 675
            +E+T   + G L    Q   AE     S  +  + VVK R +K YR P LD  +  +R  AEAR ++ ARR GV  PV+   D   H +  E ++G  +K +              E+ A   G  + KLH  G+ HGDLTTSNM+  +  +++ LIDFGLS  +   E + VDL+VL + L S
Sbjct:  318 VEVTWRHDAGQLFAPGQSETAERGAEASVNLTDKDVVKTRLAKGYRVPELDRHLIAERTRAEARAISAARRGGVPVPVIR--DVTDHEIVMEKLDGDVLKYV------------MNEEYAKGAGLTVGKLHKAGITHGDLTTSNMIWHN--DRVYLIDFGLSQMTEEIEPRGVDLHVLFQTLES 485          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: BUD12_ENCCU (Probable serine/threonine-protein kinase BUD32 homolog OS=Encephalitozoon cuniculi GN=BUD32 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.103e-17
Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  229 VVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLH 681
            VVK+R  K YR  +LD KI   R   EA+ + K   LG+  P L  +     T+  E VEG  +K++       G +   L       G  +++LH   +IHGDLTTSN +  S   ++  IDFGLS+ S   EDKAVDLYV E+A+   H
Sbjct:   19 VVKKRARKAYRIEALDLKIINGRTKREAKILRKLEALGIPAPRL--ISTYGDTIVMEKVEGTVLKEMIDSSDNPGALFRDL-------GALVSRLHIADIIHGDLTTSNFIHGS---KIYAIDFGLSYISRKDEDKAVDLYVFEKAVGCAH 157          
BLAST of FC920982 vs. ExPASy Swiss-Prot
Match: GCP_PICTO (Putative O-sialoglycoprotein endopeptidase OS=Picrophilus torridus GN=gcp PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.800e-15
Identity = 56/194 (28.87%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  151 EDGSLILIKQGAEARVFESTFVGRRCVVKERFSKKYRHPSLDSKITLKRLNAEARCMTKARRLGVSTPVLYAVDPVQHTLTFEYVEGPSVKDIFLEFGLHGIMEEQLEDIALQIGNAIAKLHDGGLIHGDLTTSNMLIRSGKNQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSLHSPCGNVMDRILSAYRKS 732
            ++ S+    +GAE+ +    F GR  V K+R  K YR   LD KI L+R+  E   M    + G + P++Y  D     LT E + G ++ D F          +  E++   I +A+AK+H   + HGDLT +N++I    +++  ID  +       ED A DL++L  ++ SL+     ++    + Y K+
Sbjct:  327 DENSISFKDKGAESIITNGEFYGRSVVFKKRPEKSYRDKRLDLKIRLERMKNEFYIMYYLHKTG-NAPIVYDFDRFDMVLTIERINGLTMNDYF--------KSKYDENVIRMIADAVAKMHGLRISHGDLTPNNIII---SDKIYFIDTSMGHLRCSDEDIADDLFLLYESMKSLYVNGHEMIKHFENEYSKN 508          
The following BLAST results are available for this feature:
BLAST of FC920982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GCP_THEVO2.072e-1829.12Putative O-sialoglycoprotein endopeptidase OS=Ther... [more]
GCP_METLZ1.343e-1735.87Putative O-sialoglycoprotein endopeptidase OS=Meth... [more]
BUD12_ENCCU5.103e-1739.07Probable serine/threonine-protein kinase BUD32 hom... [more]
GCP_PICTO2.800e-1528.87Putative O-sialoglycoprotein endopeptidase OS=Picr... [more]

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Properties
Property NameValue
Genbank descriptionC32201F06EF RVDevelopN Citrus clementina cDNA clone C32201F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920982 ID=FC920982; Name=FC920982; organism=Citrus clementina; type=EST; length=742bp
GATTTTGCGAGTGAGCGCGCTGAGTTCTGTGGCGGCCTGTGGTTTCAGTT
CTGTAGCGGAGCCTCCAGTTTCACCGTATTCTCCACTCATAGCCAATTAC
AGCGGTAAAGTACTGCCAAGTTGTTCAATATGGAGATTACAGCCAACAGT
GAAGATGGATCGCTCATTCTCATAAAGCAAGGAGCTGAAGCTAGGGTTTT
TGAGTCAACTTTTGTGGGAAGGAGGTGTGTTGTCAAGGAGCGTTTCTCAA
AGAAATATAGGCATCCATCTCTGGATTCAAAAATCACTCTCAAACGCCTG
AATGCGGAGGCTAGGTGCATGACCAAAGCTAGAAGACTTGGAGTTTCAAC
TCCGGTGCTTTATGCTGTTGATCCTGTTCAGCATACACTGACATTTGAGT
ATGTCGAGGGTCCTTCTGTCAAAGATATATTCCTTGAATTTGGTTTGCAT
GGTATCATGGAAGAGCAGTTGGAGGATATTGCATTGCAGATTGGTAATGC
AATTGCTAAATTACATGATGGGGGTCTCATTCATGGCGATTTGACCACAT
CAAACATGTTAATTAGGAGTGGCAAAAACCAGCTGGTCCTCATTGACTTT
GGTTTGAGTTTCACATCAACCCTTCCAGAAGACAAAGCTGTTGACTTATA
TGTACTTGAGAGAGCCTTACTTTCGTTGCATTCTCCATGTGGTAATGTGA
TGGACCGGATACTTTCTGCATACAGGAAGTCATCAAGCATGG
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