FC920996

Overview
NameFC920996
Unique NameFC920996
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 484
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 484
            AG I +EL++  TP+   NF  LC             +Y G+ FHR++P F+ Q            ESIYG  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 60/172 (34.88%), Postives = 75/172 (43.60%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCT------AKTE-----W----------------LDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 553
            G + + LF D  P+T  NF        G+ K G   +Y G  FHR+IP FM Q            +SIYG  F DE   + +   G LSMANAGP TNGSQFF+        AK E     W                LD +H VFGQ+V+           G  +G  +KP
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKP 457          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 484
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 484
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQV 484
            AG I +EL++   P+   NF  LC             +Y  + FHRV+PGF+ Q            ESIYG+ F DE   + +    G+++MANAG   NGSQFF    + + L+ KH +FG+V
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKV 133          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 47/148 (31.76%), Postives = 70/148 (47.30%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 556
            AG I +EL++   P+   NF  LC             +Y  + FHRV+P F+ Q            ES++G  F DE   + +    G+++MANAGP  NGSQFF    + + L+ KH +FG+V  G  +   +       G   +PV
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTIYNILRLAEVDIGEDERPV 156          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTAKT-EWLDGKHVVFGQVVEGMDVVKAIEK 520
            G +V++L+ +  PR   NF  LC          K  +Y     H V   F+ Q            ESI+G  + D+ +F +       KH   G +SM N G   +GSQF + T +  ++LDG H VFG+V EGMD+VK I +
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKINE 141          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 2
Query:  119 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVK-------KHTGPGILSMANAGPGTNGSQFFVCTAKT-EWLDGKHVVFGQVVEGMDVVKAIEK 520
            G +V++L+ +  PR   NF  LC          K  +Y     H V   F+ Q            ESI+G  + D+ +F +       KH   G +SM N G   +GSQF + T +  ++LDG H VFG+V EGMD++K I +
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKINE 141          
BLAST of FC920996 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 2
Query:  116 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVE 490
            +G I +EL  +  P+   NF  L   +KG        +YK  +FHR I GFM Q            ESI+G  F DE     KH   G LSMAN G  TN SQFF+       L+ KH +FG V++
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVID 422          
The following BLAST results are available for this feature:
BLAST of FC920996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
SDC10_BOVIN1.803e-1337.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
SDC10_DANRE2.355e-1337.10Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
BPPI_STRP63.076e-1334.88Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
SDC10_PONAB6.852e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA6.852e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN6.852e-1336.29Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
SDC10_XENLA1.526e-1231.76Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL4_MOUSE1.292e-1133.57Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIL4_HUMAN1.688e-1132.87Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
PPIL2_ASPOR2.204e-1138.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionC32201G09EF RVDevelopN Citrus clementina cDNA clone C32201G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920996 ID=FC920996; Name=FC920996; organism=Citrus clementina; type=EST; length=698bp
GCCAACAATCACCAAATCAGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTC
CAATCAACCAATCAAAAATGCCAAACCCCAAAGCGTTCTTCGACATGACC
GTCGGCGGTCAGCCCGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGT
CACCCCCCGAACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAG
GCATCGGCAAGTCCGGCAAGCCACTCCACTACAAGGGCTCGTCCTTCCAC
CGTGTGATCCCCGGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAA
CGGAACCGGAGGCGAATCAATCTACGGCTCAAAATTCGCCGATGAGAACT
TCGTGAAGAAGCACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGA
CCCGGAACCAACGGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTG
GCTCGATGGGAAGCACGTTGTGTTCGGTCAAGTCGTCGAAGGAATGGACG
TCGTCAAGGCCATCGAGAAAGTGGGGTCCAGCTCCGGAAGGACCAACAAG
CCCGTCGTGATCGCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
ATGATCGCCATCATCACGAGCCGTCTGATCGCGATCGTGATGGTGATTAT
GTTATCTATTATTATGTGGCCGTGTCTGTAGGACTTTTATCTTTATCT
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