FC921002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRL1_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Homo sapiens GN=GABARAPL1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K++ F R +E +I KYPDRVPVI E+ KA +PD++K+K+LVP D++VGQF ++ R+HL P ALF FV +T+P T+ M +YE +ED FLY+ YS E +G Sbjct: 5 YKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRL1_CAVPO (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Cavia porcellus GN=GABARAPL1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K++ F R +E +I KYPDRVPVI E+ KA +PD++K+K+LVP D++VGQF ++ R+HL P ALF FV +T+P T+ M +YE +ED FLY+ YS E +G Sbjct: 5 YKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRL1_BOVIN (Gamma-aminobutyric acid receptor-associated protein-like 1 OS=Bos taurus GN=GABARAPL1 PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K++ F R +E +I KYPDRVPVI E+ KA +PD++K+K+LVP D++VGQF ++ R+HL P ALF FV +T+P T+ M +YE +ED FLY+ YS E +G Sbjct: 5 YKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25 Identity = 56/121 (46.28%), Postives = 85/121 (70.25%), Query Frame = 2 Query: 65 MGKMQSFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLT---PGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 M + SFK++ +R E + I +KY DR+PVI E+ ++D PD++KKK+LVP D++VG+F++ + R H+T KA+++FV +T+P TA L+ +YE +KDEDGFLY+ YS E TFG Sbjct: 1 MVHVSSFKNDHPLDKRREVAERIRSKYLDRIPVIVEKAPRSDAPDIDKKKYLVPADITVGKFVYEI--RKHMTKVSAEKAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTFG 119
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: LGG1_CAEEL (Protein lgg-1 OS=Caenorhabditis elegans GN=lgg-1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 80 SFKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGYE 424 ++K+E F +R E +I KYPDR+PVI E+ K+ L D++KKK+LVP D++VGQF ++ R+ L P ALF FV + +PQT T M +Y+ +ED FLY+ YS E +G E Sbjct: 4 AYKEENNFEKRRAEGDKIRRKYPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESVYGGE 118
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 50/112 (44.64%), Postives = 75/112 (66.96%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K+ F R +E +I KYPDRVP+I E+ KA +PD++++K+LVP D++ GQF ++ R+HL P ALF FV +T+P T+ M +YE +ED FLY+ YS+E +G Sbjct: 5 YKEVHPFEYRKKEGEKIRKKYPDRVPLIVEKAPKARVPDLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRAP_RAT (Gamma-aminobutyric acid receptor-associated protein OS=Rattus norvegicus GN=Gabarap PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K+E F +R E +I KYPDRVPVI E+ KA + D++KKK+LVP D++VGQF ++ R+HL ALF FV + +P T+ M +Y+ +ED FLY+ YS E +G Sbjct: 5 YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRAP_RABIT (Gamma-aminobutyric acid receptor-associated protein OS=Oryctolagus cuniculus GN=GABARAP PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K+E F +R E +I KYPDRVPVI E+ KA + D++KKK+LVP D++VGQF ++ R+HL ALF FV + +P T+ M +Y+ +ED FLY+ YS E +G Sbjct: 5 YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRAP_MOUSE (Gamma-aminobutyric acid receptor-associated protein OS=Mus musculus GN=Gabarap PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K+E F +R E +I KYPDRVPVI E+ KA + D++KKK+LVP D++VGQF ++ R+HL ALF FV + +P T+ M +Y+ +ED FLY+ YS E +G Sbjct: 5 YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116
BLAST of FC921002 vs. ExPASy Swiss-Prot
Match: GBRAP_HUMAN (Gamma-aminobutyric acid receptor-associated protein OS=Homo sapiens GN=GABARAP PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 83 FKDEFTFGQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 418 +K+E F +R E +I KYPDRVPVI E+ KA + D++KKK+LVP D++VGQF ++ R+HL ALF FV + +P T+ M +Y+ +ED FLY+ YS E +G Sbjct: 5 YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG 116 The following BLAST results are available for this feature:
BLAST of FC921002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921002 ID=FC921002; Name=FC921002; organism=Citrus clementina; type=EST; length=682bpback to top |