FC921048

Overview
NameFC921048
Unique NameFC921048
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.735e-28
Identity = 63/136 (46.32%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  105 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQ 512
            +C GA+YGTAKSGVG+ +  V RP+L++K++VPVVMAG++ IYGL+++V++S  ++ K     L+ G+                  AIGIVGDAGVR  AQQP+LFVGM            YGLIV ++L+SRA Q
Sbjct:   24 TCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRASQ 156          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL2_KLULA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Kluyveromyces lactis GN=VMA11 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28
Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  105 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 503
            SC+GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL++AV+I+ G++P  + Y LF+G+                  AIGIVGD GVR    QP+LFVG+            YG+IV +IL++R
Sbjct:   30 SCLGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILAVYGLVVAVLIAGGLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTR 161          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL2_YEAST (V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae GN=VMA11 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.378e-27
Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  105 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQ 512
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                  AIG+VGD GVR    QP+LFVG+            YG+IV +IL++R  +
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNTRGSE 164          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL2_CANGA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata GN=VMA11 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.799e-27
Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  105 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQ 512
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                  AIGIVGD GVR    QP+LFVG+            YG+I+ +IL+++  +
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEEYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIIALILNTKGSE 164          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27
Identity = 66/130 (50.77%), Postives = 84/130 (64.62%), Query Frame = 3
Query:  111 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSS 500
            MGAAYGTAK+ VG+++MGVM+P+LV+K+ +PV+ AGV+ IYGLII VI+  GI P A +Y L   +                 MAIGIVGD+GVRA  QQPKL+V M            YGLI+GI+LSS
Sbjct:   45 MGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAGLTVGLCGLAAGMAIGIVGDSGVRAFGQQPKLYVIMMLILIFSEALGLYGLIIGILLSS 173          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.930e-27
Identity = 58/133 (43.61%), Postives = 86/133 (64.66%), Query Frame = 3
Query:  105 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 503
            S +GAA GTAKSG+G++ +G  RPEL+MKS++PVVM+G+L +YGL++AV+++ G++P  + Y LF+G+                  AIGIVGD GVR    QP+LFVG+            YG+I+ +IL++R
Sbjct:   29 SSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGVRKFMHQPRLFVGIVLILIFAEVLGLYGMIIALILNTR 160          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26
Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 3
Query:  114 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSS 500
            G+AYGTAK+G G+ASM V RP+LVMK+I+PVVMAG++ IYGL++AVI+S  + P   +Y + + +                  AIGI GDAGVRA +QQP++FVGM            YG+IV +IL +
Sbjct:   40 GSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVALILGA 168          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.598e-26
Identity = 56/133 (42.11%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  105 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSR 503
            SC GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL+++V+I+ G++P  ++Y LF+G+                  +IGIVGD GVR    QP+LFVG+            YG+I+ +IL+++
Sbjct:   29 SCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMHQPRLFVGIVLILIFAEVLGLYGMIIALILNTK 160          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 3
Query:  114 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRA 506
            GAAYGTAK+GVG+++MGV+RP+L++K+ +PVVMAG++ IYGL+++V+IS  +    +   L+ G+                  AIGIVGDAGVR  AQQP+LFV M            YGLIV ++L++RA
Sbjct:   28 GAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLISGNLK---QILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAMILILIFAEVLGLYGLIVALLLNTRA 155          
BLAST of FC921048 vs. ExPASy Swiss-Prot
Match: VATL1_YEAST (V-type proton ATPase subunit c OS=Saccharomyces cerevisiae GN=VMA3 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.432e-26
Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = 3
Query:  111 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQ 512
            +GAAYGTAKSGVG+ +  V+RP+L+ K+IVPV+MAG++ IYGL+++V++   +  K     L+ G+                  AIGIVGDAGVR ++QQP+LFVGM            YGLIV ++L+SRA Q
Sbjct:   26 LGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQ 156          
The following BLAST results are available for this feature:
BLAST of FC921048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_CANTR4.735e-2846.32V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_KLULA6.184e-2845.11V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_YEAST1.378e-2744.12V-type proton ATPase subunit c' OS=Saccharomyces c... [more]
VATL2_CANGA1.799e-2743.38V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_DICDI2.350e-2750.77V-type proton ATPase proteolipid subunit OS=Dictyo... [more]
VATL2_ASHGO8.930e-2743.61V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL1_CAEEL1.166e-2646.51V-type proton ATPase 16 kDa proteolipid subunit 1 ... [more]
VATL2_DEBHA2.598e-2642.11V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_SCHPO4.432e-2645.80V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_YEAST4.432e-2645.52V-type proton ATPase subunit c OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionC32202E03EF RVDevelopN Citrus clementina cDNA clone C32202E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921048 ID=FC921048; Name=FC921048; organism=Citrus clementina; type=EST; length=729bp
GGTAGCAAACAGGCAAAATCATCATCGCCATGTCATCGACTTTCTCCGGC
GACGAAACTGCTCCCTTCTTCGGCTTCCTTGGAGCAGCGGCCGCTCTCGT
CTTCTCCTGTATGGGTGCTGCCTATGGGACAGCAAAGAGTGGGGTTGGAG
TGGCTTCAATGGGTGTCATGAGGCCGGAGCTTGTTATGAAATCGATTGTT
CCAGTGGTTATGGCTGGAGTTTTGGGTATTTATGGGTTGATTATTGCTGT
TATTATTAGTACTGGGATCAACCCTAAAGCTAAGTCTTATTATTTGTTTG
ATGGGTATGCACATTTGTCTTCGGGGCTTGCTTGTGGTCTTGCTGGACTC
TCTGCTGGGATGGCTATTGGAATTGTTGGTGATGCGGGAGTTAGGGCTAA
CGCACAGCAGCCTAAGTTGTTTGTGGGAATGATTCTTATTCTCATCTTTG
CCGAAGCTCTCGCTCTTTATGGTCTCATCGTGGGAATCATCCTCTCATCT
CGAGCAGGCCAATCTCGGGCAGAATAAAAGAAAAGGTCAAAACAGTTATC
TTGTAACGTTTATCCAGTCTGATTAAAATTGAAGCTGTATGAGTTGATTT
TTTTTGGATTTGTTTAGTTTAGTTGATAAACTCGTGTACATGATGGATTC
CCTTTAGTATTATGGAATTATACTCTGTTGTCACAGGCTTGGTTTTCCTT
TGGATAGTGAAGCAGATATACATTTCAAT
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