FC921089

Overview
NameFC921089
Unique NameFC921089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 7.266e-51
Identity = 94/129 (72.87%), Postives = 115/129 (89.15%), Query Frame = 2
Query:  263 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            + IA DVT+LIG TP+VYLN++ +GCV  +AAKLE+MEPC SVKDRIGFSMI+DAE+KGLI PG+S+L+EPTSGNTG+GLAF AA+KGYKLI+TMPASMS+ERR++L AFG ELVLTD AKG +GA+ K
Sbjct:    5 IGIANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPAKGMKGAIAK 133          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.239e-50
Identity = 94/131 (71.76%), Postives = 116/131 (88.55%), Query Frame = 2
Query:  257 EGLNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            E + IA+DVT+LIG TP+VYLN +V GCVA +AAKLE MEPC SVKDRIG+SMI DAE+KGLI PG+S+L+EPTSGNTG+GLAF+AA+KGYKLI+TMP+SMSLERR++L+ F +ELVLTD AKG +GA+ K
Sbjct:    4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKGMKGAISK 134          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.114e-50
Identity = 94/127 (74.02%), Postives = 112/127 (88.19%), Query Frame = 2
Query:  269 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            IA+DVT+LIG TP+VYLN +  GCV  +AAKLE MEPC SVKDRIG+SMI DAE+KG I PGKS+L+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTD   G +GAVQK
Sbjct:    9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQK 135          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.761e-50
Identity = 94/127 (74.02%), Postives = 113/127 (88.98%), Query Frame = 2
Query:  269 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            IA+DVT+LIG TP+VYLN + +GCV  +AAKLE+MEPC SVKDRIGFSMI+DAE+KGLI PG+S+L+EPTSGNTG+GLAF AA+KGYKLI+TMPASMS ERR++L AFG ELVLTD AKG +GA+ K
Sbjct:    5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAK 131          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 3.987e-49
Identity = 95/128 (74.22%), Postives = 111/128 (86.72%), Query Frame = 2
Query:  266 NIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +IA+DVT+LIG TP+VYLN +  GCV    AKLE MEPC SVKDRIG+SMI DAE+KGLITPG S+L+EPTSGNTGIGLAF+AA+KGYKL LTMPASMS+ERR++LKAFGAELVLTD   G +GAV+K
Sbjct:    7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKK 134          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.675e-47
Identity = 92/131 (70.23%), Postives = 113/131 (86.26%), Query Frame = 2
Query:  257 EGLNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            E +NIAEDVTQLIG TPMVYLN +  GC+A+IAAKLE MEPC SVKDRIG SMI +AE  G ITP K++LVEPT+GNTG+G+AF+AA+KGYKLI+TMPAS+++ERR+LL+A GAE+VLT+  KG +GAV K
Sbjct:   95 ETVNIAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDK 225          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 7.799e-37
Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 2
Query:  263 LNIAEDVTQLIGKTPMVYLNTI--VKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            + IA ++T+LIG+TP+V LN I  ++GC A I  KLE M P  SVKDRIG +MI  AEQ+GLI PGK++L+EPTSGNTGI LA +AA+KGY+LILTMP +MS ERR +LKA+GA+L LT  ++G  G +++
Sbjct:    1 MKIASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEGLIEPGKTLLIEPTSGNTGIALAMVAAAKGYQLILTMPETMSQERRAMLKAYGAKLELTPGSEGMGGCIRR 131          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.737e-36
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 2
Query:  263 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            ++IAED+TQLIG+TP+V L  +  G VA+I AKLE   P  SVKDRIG +M+  AEQ GLI P  +I++EPTSGNTGI LA + A++GY+ +LTMP +MSLERR+LL+A+GAEL+LT  A G  GA+ K
Sbjct:    1 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAK 128          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.737e-36
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 2
Query:  263 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            ++IAED+TQLIG+TP+V L  +  G VA+I AKLE   P  SVKDRIG +M+  AEQ GLI P  +I++EPTSGNTGI LA + A++GY+ +LTMP +MSLERR+LL+A+GAEL+LT  A G  GA+ K
Sbjct:    1 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAK 128          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.589e-35
Identity = 72/129 (55.81%), Postives = 98/129 (75.97%), Query Frame = 2
Query:  263 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            ++IAEDVTQL+G TP+V L  + +G +A++ AKLE   P  SVKDRIG +MI  AE+ GLI P  ++++EPTSGNTGI LA + A++GY  +LTMP +MS+ERR+LL+A+GAEL+LT  A G  GA+ K
Sbjct:    1 MSIAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIKPD-TVILEPTSGNTGIALAMVCAARGYHCVLTMPETMSIERRMLLRAYGAELILTPGADGMSGAIAK 128          
The following BLAST results are available for this feature:
BLAST of FC921089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CYSK2_BRAJU7.266e-5172.87Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK_SOLTU1.239e-5071.76Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK_WHEAT2.114e-5074.02Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]
CYSK1_ARATH2.761e-5074.02Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]
CYSK_MAIZE3.987e-4974.22Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK4_ARATH1.675e-4770.23Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY37.799e-3758.78Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCTU1.737e-3658.91Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO1.737e-3658.91Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK_MYCLE5.589e-3555.81Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionC32101A02EF RVDevelopN Citrus clementina cDNA clone C32101A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921089 ID=FC921089; Name=FC921089; organism=Citrus clementina; type=EST; length=651bp
GATCATCAGTTGGTCGTCAGACAGTTAGTCCCACAAAGTTCCAAAAACAA
TGGCCACTTCGTCTTCTCTGGTGTGCAGTCCGTTGACTGTTCCTCTCTGC
ATCTCCAAGAAATCATCATTGGCCACTCTGAAACTGGGCTACATTAGCCC
CATAACAGCAGCTCGAAGATTGAAGCAGAATTTGTACAAGGTCTCTTACA
AACCCTGCAACTCTGTTGTGTGCAAGGCTGTCTCTGTGAAGCCGCAGACT
GGGATTGAAGGTCTCAACATTGCTGAAGATGTCACTCAGCTTATTGGGAA
GACGCCAATGGTATACCTGAATACTATTGTCAAGGGGTGTGTTGCAAACA
TTGCTGCCAAGCTTGAAATCATGGAACCATGTTGTAGTGTTAAGGACAGG
ATTGGTTTCAGTATGATAGCTGATGCCGAGCAAAAAGGACTAATAACGCC
TGGAAAGAGTATTCTTGTAGAGCCCACTAGTGGAAACACTGGAATTGGCC
TTGCTTTCATAGCTGCTTCGAAAGGATATAAGCTCATTTTGACTATGCCA
GCCTCAATGAGCTTGGAAAGGAGAGTTCTTCTGAAAGCATTTGGAGCTGA
GCTTGTATTAACTGATTCAGCAAAAGGCATNGAAGGGGCTGTGCAGAAAG
C
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