FC921089

Overview
NameFC921089
Unique NameFC921089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_STAAW (Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT  ++  +GA++K
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKK 130          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_STAAS (Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT  ++  +GA++K
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKK 130          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_STAAR (Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT  ++  +GA++K
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKK 130          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_STAAN (Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT  ++  +GA++K
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKK 130          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_STAAM (Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT  ++  +GA++K
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKK 130          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_STAAC (Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/125 (56.00%), Postives = 92/125 (73.60%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            +++TQ+IG TP+V L  +V    A++  KLE   P  SVKDRI  +MI  AE++G I PG +I VEPTSGNTGIGLAF+ A+KGYK + TMP +MS ERR LLKA+GAELVLT  ++  +GA++K
Sbjct:    7 DNITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDTI-VEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKK 130          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.643e-28
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 2
Query:  263 LNIAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            L I  +   LIG TP+V LN +     A +  KLE   P  SVKDR  + MI +AEQ GL+ PG S+++EPTSGNTGIGLA  AA++GYK IL MP +M+ ER  LLKA+GAE+VLT   +   G+++K
Sbjct:    2 LKIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPG-SVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKK 129          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_FLAS3 (Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM ID92-509) GN=cysK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.515e-27
Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  275 EDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            ++  + IG TP+V +N +       I  KLE   P  S+KDRI  +MI DAE KGL+    +I +EPTSGNTGIGLA +AA KGYKLIL MP SMS+ERR +++A+GAE VLT   KG +GA++K
Sbjct:    4 QNALETIGNTPVVKINNLFNSD-HEIWIKLEKSNPGGSIKDRIALAMIEDAEAKGLLNKDSTI-IEPTSGNTGIGLALVAAVKGYKLILVMPESMSIERRKIMEAYGAEFVLTPREKGMKGAIEK 126          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.802e-25
Identity = 67/127 (52.76%), Postives = 84/127 (66.14%), Query Frame = 2
Query:  269 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            I ED +  IG TP+V LN I  G   NI AK+E   P  SVK RIG +MI DAE+KG +     I +E TSGNTGI LA++AA++ Y L L MP SMS+ERR LLK+ GA L+LT+   G +GA+ K
Sbjct:    4 IYEDNSFTIGNTPLVRLNNIGNG---NILAKIESRNPSFSVKCRIGANMIWDAEKKGRLNKNIEI-IEATSGNTGIALAYVAAARNYSLTLIMPDSMSIERRKLLKSLGAHLILTNGKHGMKGAISK 126          
BLAST of FC921089 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.602e-24
Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 2
Query:  269 IAEDVTQLIGKTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMIADAEQKGLITPGKSILVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDSAKGXEGAVQK 649
            I  D +  IG TP+V L     G   N+  K+E   P  SVK RIG +M+  AE+ G +T GK I V+ TSGNTGI LA++AA++GYK+ LTMP +MSLER+ LL   G  LVLT+ AKG +GA+ K
Sbjct:    3 IYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAK 126          
The following BLAST results are available for this feature:
BLAST of FC921089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CYSK_STAAW2.871e-3156.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAS2.871e-3156.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAR2.871e-3156.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAN2.871e-3156.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAM2.871e-3156.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAC2.871e-3156.00Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSM_BACSU8.643e-2851.16Probable cysteine synthase OS=Bacillus subtilis GN... [more]
CYSK_FLAS32.515e-2752.80Cysteine synthase OS=Flavobacterium sp. (strain K3... [more]
CYSK_BUCAP1.802e-2552.76Cysteine synthase OS=Buchnera aphidicola subsp. Sc... [more]
CYSK_HAEIN2.602e-2450.39Cysteine synthase OS=Haemophilus influenzae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionC32101A02EF RVDevelopN Citrus clementina cDNA clone C32101A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921089 ID=FC921089; Name=FC921089; organism=Citrus clementina; type=EST; length=651bp
GATCATCAGTTGGTCGTCAGACAGTTAGTCCCACAAAGTTCCAAAAACAA
TGGCCACTTCGTCTTCTCTGGTGTGCAGTCCGTTGACTGTTCCTCTCTGC
ATCTCCAAGAAATCATCATTGGCCACTCTGAAACTGGGCTACATTAGCCC
CATAACAGCAGCTCGAAGATTGAAGCAGAATTTGTACAAGGTCTCTTACA
AACCCTGCAACTCTGTTGTGTGCAAGGCTGTCTCTGTGAAGCCGCAGACT
GGGATTGAAGGTCTCAACATTGCTGAAGATGTCACTCAGCTTATTGGGAA
GACGCCAATGGTATACCTGAATACTATTGTCAAGGGGTGTGTTGCAAACA
TTGCTGCCAAGCTTGAAATCATGGAACCATGTTGTAGTGTTAAGGACAGG
ATTGGTTTCAGTATGATAGCTGATGCCGAGCAAAAAGGACTAATAACGCC
TGGAAAGAGTATTCTTGTAGAGCCCACTAGTGGAAACACTGGAATTGGCC
TTGCTTTCATAGCTGCTTCGAAAGGATATAAGCTCATTTTGACTATGCCA
GCCTCAATGAGCTTGGAAAGGAGAGTTCTTCTGAAAGCATTTGGAGCTGA
GCTTGTATTAACTGATTCAGCAAAAGGCATNGAAGGGGCTGTGCAGAAAG
C
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