FC921095

Overview
NameFC921095
Unique NameFC921095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921095 vs. ExPASy Swiss-Prot
Match: PFPI_PYRHO (Intracellular protease 1 OS=Pyrococcus horikoshii GN=pfpI PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 50/154 (32.47%), Postives = 72/154 (46.75%), Query Frame = 2
Query:   35 KVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGM-PGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDGKVVTSRGP 493
            KVL   AN  E +E +     L+  G +V +AS E+   +   HG  +  D          FD + LPGG  P    L E  V  SI +K  S G   A++C  P + + + G+L+G K T YP   + +  A    V++ V  DG  V+SR P
Sbjct:    2 KVLFLTANEFEDVELIYPYHRLKEEGHEVYIASFERGT-ITGKHGYSVKVDLTFDKVNPEEFDALVLPGGRAPERVRLNEKAV--SIARKMFSEGKPVASICHGPQILISA-GVLRGRKGTSYPGIKDDMINAGVEWVDAEVVVDGNWVSSRVP 151          
BLAST of FC921095 vs. ExPASy Swiss-Prot
Match: PFPI_PYRAB (Intracellular protease 1 OS=Pyrococcus abyssi GN=pfpI PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 48/155 (30.97%), Postives = 75/155 (48.39%), Query Frame = 2
Query:   35 KVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGM-PGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDGKVVTSRGPG 496
            +VL+  A+  E +E +     L+  G +V VAS ++ + +   HG  +  D    +     FD + LPGG  P    L E  V   I KK  S G   A++C  P + + + G+L+G + T YP   + +  A    V++ V  DG  V+SR PG
Sbjct:    2 RVLILSADQFEDVELIYPYHRLKEEGHEVLVASFKRGV-ITGKHGYTVNVDLAFEEVNPDEFDALVLPGGRAPERVRLNEKAV--EIAKKMFSEGKPVASICHGPQILISA-GVLRGRRGTSYPGIKDDMINAGVDWVDAEVVVDGNWVSSRVPG 152          
BLAST of FC921095 vs. ExPASy Swiss-Prot
Match: PFPI_PYRKO (Intracellular protease 1 OS=Pyrococcus kodakaraensis GN=pfpI PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 48/155 (30.97%), Postives = 77/155 (49.68%), Query Frame = 2
Query:   35 KVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGM-PGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDGKVVTSRGPG 496
            KVL+  A+G E +E +  +  ++  G +V VAS ++  ++   HG  +  D    +     FD + LPGG  P    L E  V  +I KK    G   A++C  P + + + G+LKG K T   +  + +  A A  +++ V  DG  V+SR PG
Sbjct:    2 KVLILSADGFEDLELIYPLHRIKEEGHEVYVASFQRG-KITGKHGYTVNVDLAFDEVDPDEFDALVLPGGRAPEIVRLNEKAV--AITKKMFEDGKPVASICHGPQILISA-GVLKGRKGTSTVTIRDDVKNAGAEWIDAEVVVDGNWVSSRHPG 152          
BLAST of FC921095 vs. ExPASy Swiss-Prot
Match: PFPI_PYRFU (Intracellular protease 1 OS=Pyrococcus furiosus GN=pfpI PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 48/155 (30.97%), Postives = 71/155 (45.81%), Query Frame = 2
Query:   35 KVLVPVANGSEPIEAVITIDVLRRSGADVTVASVEKQLRVDACHGVKIVADALVSDCRDAVFDLIALPGGM-PGATNLKESDVLESIVKKQASAGCLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDGKVVTSRGPG 496
            K+L   AN  E +E +     L+  G +V +AS EK + +   HG  +  D    +     FD + LPGG  P    L E  V   I +K  + G   A +C  P + + + G+LKG K T Y    + +  A    ++  V  DG  V+SR PG
Sbjct:    2 KILFLSANEFEDVELIYPYHRLKEEGHEVYIASFEKGV-ITGKHGYSVKVDLTFDEVNPDEFDALVLPGGRAPERVRLNEKAV--EIARKMFTEGKPVATICHGPQILISA-GVLKGRKGTSYIGIRDDMINAGVEWIDREVVVDGNWVSSRHPG 152          
The following BLAST results are available for this feature:
BLAST of FC921095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PFPI_PYRHO3.529e-1232.47Intracellular protease 1 OS=Pyrococcus horikoshii ... [more]
PFPI_PYRAB1.027e-1130.97Intracellular protease 1 OS=Pyrococcus abyssi GN=p... [more]
PFPI_PYRKO1.751e-1130.97Intracellular protease 1 OS=Pyrococcus kodakaraens... [more]
PFPI_PYRFU2.287e-1130.97Intracellular protease 1 OS=Pyrococcus furiosus GN... [more]

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Properties
Property NameValue
Genbank descriptionC32101A09EF RVDevelopN Citrus clementina cDNA clone C32101A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921095 ID=FC921095; Name=FC921095; organism=Citrus clementina; type=EST; length=717bp
GACAGCAACAGCTACAATGTCTTCAACTTCCAAAAAGGTTTTGGTGCCTG
TTGCGAACGGGAGTGAGCCGATTGAGGCCGTGATAACGATCGATGTTTTG
AGAAGGTCTGGAGCTGACGTCACGGTTGCGTCTGTGGAGAAACAGCTTCG
TGTCGACGCGTGTCATGGTGTCAAGATTGTCGCTGATGCTCTTGTGTCTG
ACTGCCGCGACGCTGTTTTTGATCTTATAGCTCTTCCCGGTGGCATGCCC
GGTGCTACCAATCTGAAGGAATCTGATGTATTAGAAAGCATTGTGAAGAA
GCAGGCCTCAGCTGGGTGCCTTTATGCTGCTGTCTGTGCTTCACCTGCTG
TGGCATTAGGGTCTTGGGGTCTGTTGAAGGGATTGAAGGCTACTTGTTAT
CCGTCATTTATGGAGCAATTAGCTCCTGCTTGTGCATCAACTGTTGAATC
AAGAGTACAGCAGGATGGTAAAGTTGTTACGAGTCGTGGACCTGGCACTA
CTATGGAGTTTGCTGTTGCACTTGTTGAGCAGTTGTATGGGAAAGAGAGA
GCTGATGAAGTTTCTGGGCCACTGGTAATGCGTGCAAATCATGGAGATGA
ATACACTATTGCTGAATTCAATCCAATTCAGTGGACATTTGACAATTCTC
CCCAGATTCTTGTGCCTATTTGCAATGGTTCGGAAGAGATGGAAGCTGTT
ATGATAATTGATATTCT
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