FC921237

Overview
NameFC921237
Unique NameFC921237
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: DJC10_XENLA (DnaJ homolog subfamily C member 10 OS=Xenopus laevis GN=dnajc10 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.855e-20
Identity = 54/177 (30.51%), Postives = 87/177 (49.15%), Query Frame = 3
Query:  150 VVQLTPNNFKSKVLNANG--VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPP----VDYQG-ARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWK 659
            VV LTP  F+S V N  G  + +V+FYAPWCG CQAL P W++ A  + G+ +V ++D  ++     +  + G+P I+++     P      Y G  RD + +  + L  +                          S +L   +F E V+  KD W+++F+APWCG C+   PE++
Sbjct:  559 VVTLTPETFQSLVRNRRGDEMWMVDFYAPWCGPCQALMPEWKRMARHINGLISVGSIDCQKYSLFCTQERVNGYPEIRLYPANINPQHTYYRYTGWHRDSQSLRNWALMYL-----------------------PKASFDLTPESFHEHVINGKDNWVLDFYAPWCGPCQNFNPEFE 712          

HSP 2 Score: 85.8853 bits (211), Expect = 2.123e-16
Identity = 56/179 (31.28%), Postives = 79/179 (44.13%), Query Frame = 3
Query:  144 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKEAANN 674
            S V+ L P NF  K        LV+F+APWC  C+AL P    A+  L G      LD   H+ L   + IR +PT  +F       +Y G  + + I EF+         E L   +               + L    F  LV   +  ++W+V+F+APWCG C+ L PEWK  A +
Sbjct:  454 SHVITLGPTNFPGK---DRDTWLVDFFAPWCPPCRALLPELRIASKRLFGQIKFGTLDCTIHEGLCNMHNIRAYPTTVVFNHSNIH-EYAGHNNAEEILEFI---------EDLRNPSV--------------VTLTPETFQSLVRNRRGDEMWMVDFYAPWCGPCQALMPEWKRMARH 605          

HSP 3 Score: 72.0182 bits (175), Expect = 3.172e-12
Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 3
Query:  159 LTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMF-VPGKPPVDYQG----ARDVKPIAEFVLQQIKAL 470
            LTP +F   V+N     +++FYAPWCG CQ   P +E  A  +KG      ++   ++ L     IR +PT++++   G    DY G    +RD K IA+ + ++I+A+
Sbjct:  676 LTPESFHEHVINGKDNWVLDFYAPWCGPCQNFNPEFEILARAVKGKIKAGKVNCQAYEHLCNSASIRSYPTVRLYPYNGSKKKDYFGEQIDSRDAKEIAQIITKRIEAI 784          

HSP 4 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 32/121 (26.45%), Postives = 58/121 (47.93%), Query Frame = 3
Query:  129 LYGS*SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSG 491
            +Y     ++ L    F   V N+  +  + FY+P C HC  L P W + A  + G+  + A++  +++ L +  GI  +P + +F  G  PV Y G R  + +  F +  I + + E  +G
Sbjct:  125 IYDDDLEIITLDRGEFDGAV-NSGELWFINFYSPGCSHCHDLAPTWRQFAKEMDGLLRIGAVNCGDNRMLCRSQGINSYPNLYIFKSGMNPVKYYGERSKERLVNFAMPYISSTVTELWAG 244          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.398e-20
Identity = 48/116 (41.38%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  117 LSDALYGS*SPVVQLTPNNFKSKVLNAN--GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            L+ AL  S S V++LT  NF+S+V +    G++LVEF+APWCGHC+ L P +E AAT LKG+  +A +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q
Sbjct:   16 LASALLASASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 131          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: MPD1_YEAST (Protein disulfide-isomerase MPD1 OS=Saccharomyces cerevisiae GN=MPD1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.571e-19
Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  132 YGS*SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAAL--DANEHQSLAQEYGIRGFPTIKMFVPGK----PPVD-------------YQGARDVKPIAEFVLQQIKALLKE 479
            Y S   + +LTP +F   + N N   LVEFYAPWCGHC+ L+  + KAA  L GV  VAA+  D N++++L  +Y + GFPT+ +F P K     P+D             Y GAR + PI +F L +I++ +K+
Sbjct:   25 YDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKK 159          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.499e-19
Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 3
Query:  117 LSDALYGS*SPVVQLTPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSKDLWIVEFF 614
            L+ A   + S V++LT +NF+S++ +  ++G++LVEF+APWCGHC+ L P +E AAT LKG+  +A +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q         +G A              S+ L S    E  +  KD  +V FF
Sbjct:   16 LAAARLAAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRTADGIVSHLKKQ---------AGPA--------------SVPLKSEEEFEKFISDKDASVVGFF 160          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.968e-19
Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  117 LSDALYGS*SPVVQLTPNNFKSKVLNAN--GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            L+ A   + S V++LT  NF+S+V +    G++LVEF+APWCGHC+ L P +E AAT LKG+  +A +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q
Sbjct:   16 LASARLAAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 131          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_CHICK (Protein disulfide-isomerase A3 OS=Gallus gallus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.968e-19
Identity = 61/183 (33.33%), Postives = 90/183 (49.18%), Query Frame = 3
Query:  126 ALYGS*SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKEAANN 674
            AL    S VV+L+  +F+S +    G+VLVEF+APWCGHC+ L P +E AAT LKG+  +  +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q         +G A              S+ L+S    E  +  KD  +V FF    G       E+ +AANN
Sbjct:   19 ALSAGASDVVELSDADFESGLAERPGLVLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLVKVDCTANSNTCNKYGVSGYPTLKIFRDGEESGTYDGPRTADGIVSHLKKQ---------AGPA--------------SVALSSVADFEKFIGDKDASVVGFFRDASGDAYS---EFMKAANN 175          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.795e-19
Identity = 46/116 (39.66%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  117 LSDALYGS*SPVVQLTPNNFKSKVLNAN--GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            L+ A   + S V++LT +NF+S+V +    G++LVEF+APWCGHC+ L P +E AAT LKG+  +A +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q
Sbjct:   16 LAAARLAAASDVLELTDDNFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 131          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.018e-18
Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  117 LSDALYGS*SPVVQLTPNNFKSKVLNAN--GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            L+ A   + S V++LT +NF+S++ +    G++LVEF+APWCGHC+ L P +E AAT LKG+  +A +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q
Sbjct:   16 LAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 131          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 1.018e-18
Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  117 LSDALYGS*SPVVQLTPNNFKSKVLNAN--GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            L+ A   + S V++LT +NF+S++ +    G++LVEF+APWCGHC+ L P +E AAT LKG+  +A +D   + +   +YG+ G+PT+K+F  G+    Y G R    I   + +Q
Sbjct:   16 LAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQ 131          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: DJC10_MOUSE (DnaJ homolog subfamily C member 10 OS=Mus musculus GN=Dnajc10 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.018e-18
Identity = 59/177 (33.33%), Postives = 85/177 (48.02%), Query Frame = 3
Query:  144 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKEAA 668
            S V  L P NF +   +     LV+F+APWC  C+AL P   KA+T+L G   V  LD   H+ L   Y I+ +PT  +F       +Y+G    + I EF+         E L   +               + L  S F+ELV + K  ++W+V+F++PWC  C+ L PEWK  A
Sbjct:  453 SHVTTLGPQNFPA---SDKEPWLVDFFAPWCPPCRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSIH-EYEGHHSAEQILEFI---------EDLRNPSV--------------VSLTPSTFNELVKQRKHDEVWMVDFYSPWCHPCQVLMPEWKRMA 602          

HSP 2 Score: 69.3218 bits (168), Expect = 2.056e-11
Identity = 34/110 (30.91%), Postives = 56/110 (50.91%), Query Frame = 3
Query:  153 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPP----VDYQGARDVKPIAEFVLQQIKAL 470
            + LTP  F  KVL      +V+FYAPWCG CQ   P +E  A ++KG      +D   +    Q+ GI+ +P++K++   +       +   +RD K IA  +  +++ L
Sbjct:  673 IDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL 782          
The following BLAST results are available for this feature:
BLAST of FC921237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
DJC10_XENLA1.855e-2030.51DnaJ homolog subfamily C member 10 OS=Xenopus laev... [more]
PDIA3_RAT5.398e-2041.38Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
MPD1_YEAST1.571e-1939.26Protein disulfide-isomerase MPD1 OS=Saccharomyces ... [more]
PDIA3_BOVIN3.499e-1933.33Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]
PDIA3_MOUSE5.968e-1939.66Protein disulfide-isomerase A3 OS=Mus musculus GN=... [more]
PDIA3_CHICK5.968e-1933.33Protein disulfide-isomerase A3 OS=Gallus gallus GN... [more]
PDIA3_CERAE7.795e-1939.66Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA3_PONAB1.018e-1838.79Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]
PDIA3_HUMAN1.018e-1838.79Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
DJC10_MOUSE1.018e-1833.33DnaJ homolog subfamily C member 10 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC32102G03EF RVDevelopN Citrus clementina cDNA clone C32102G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921237 ID=FC921237; Name=FC921237; organism=Citrus clementina; type=EST; length=676bp
GGAGTCTGGGAAGAAAGAAAAAGAAAATTAAAAATTTCTCGAGAAAGTGA
CGGAAAATGCGCAGATCACAATTGCTTGTCATTTTAACAATCTTCTCATT
CTTTGCGCGCTTCAATCTCAGTGATGCATTGTATGGTTCATAATCACCAG
TAGTTCAGCTCACTCCTAACAACTTCAAGTCCAAGGTCCTGAATGCCAAT
GGAGTTGTGTTGGTTGAGTTCTATGCACCTTGGTGTGGTCATTGTCAAGC
TTTGACACCCATATGGGAGAAAGCAGCTACTGTCTTGAAAGGTGTCGCTA
CTGTGGCAGCTCTTGATGCCAATGAACACCAGTCCCTTGCTCAGGAATAT
GGGATCAGAGGATTCCCAACCATAAAGATGTTTGTACCAGGGAAGCCTCC
AGTAGATTACCAAGGAGCTAGGGATGTCAAACCTATTGCAGAATTTGTAC
TTCAACAGATAAAGGCACTATTGAAGGAACGTCTAAGTGGGAAAGCAACT
GGAGGATCAAGTGATAAATCTAAATCTGATTCTAATGAGTCTATAGAATT
GAATTCTAGCAATTTTGATGAGTTGGTGCTCAAAAGCAAAGATCTTTGGA
TTGTGGAGTTTTTTGCACCTTGGTGTGGACACTGCAAAAAGCTGGCTCCT
GAGTGGAAAGAAGCTGCTAATAACTT
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