FC921237

Overview
NameFC921237
Unique NameFC921237
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA5_BOVIN (Protein disulfide-isomerase A5 OS=Bos taurus GN=PDIA5 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.296e-17
Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  207 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA--NEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKEAA 668
            +L+ FYAPWC  C+ + P ++KAAT L+G   +A ++   +E +++ +EY +RG+PTI  F  G+    Y         AE +++ +K     +     T                L+  +FD+ V K     +V F APWCGHCKK+ PE++ AA
Sbjct:  175 ILMMFYAPWCSVCKRIMPHFQKAATQLRGQFVLAGMNVYPSEFENIKEEYSVRGYPTICYFEKGRFLFQYDSYGST---AEDIVEWLKNPQPPQPQVPET-----PWADEGGSVYHLSDEDFDQFV-KEHSSVLVMFHAPWCGHCKKMKPEFESAA 321          

HSP 2 Score: 87.4261 bits (215), Expect = 7.296e-17
Identity = 57/178 (32.02%), Postives = 88/178 (49.44%), Query Frame = 3
Query:  150 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG----VATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKEAAN 671
            V  L+  +F  + +  +  VLV F+APWCGHC+ + P +E AA VL G       +AA+DA  +++LA+ + I  FPT+K F  G            +  A   L+  K+ ++   + ++               + L+  NF E  LK K   +V F+APWC HCKK  P +  AA+
Sbjct:  280 VYHLSDEDF-DQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGEGDSSGVLAAVDATVNKALAERFHIAEFPTLKYFKNG------------EKYAVPALRTKKSFIEWMRNPESPPPPDPAWEEQQTSVLHLSGDNFRE-TLKRKKHALVMFYAPWCPHCKKAIPHFTAAAD 443          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDI_RICCO (Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 58/168 (34.52%), Postives = 90/168 (53.57%), Query Frame = 3
Query:  144 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDANE--HQSLAQEYGIRGFPTIKMF-VPGKPPVDYQGARDVKPIAEFVLQQIKALLKERLSGKATXXXXXXXXXXXNESIELNSSNFDELVLKSKDLWIVEFFAPWCG 629
            S V+ L   NF +  ++ +  ++VEFYAPWCGHC+ L P +EKAA++LK       +A +DANE  ++ LA +Y I+GFPT+K+    GK   +Y+G R+   IAE++ +Q         SG A              S+E+ S+      +  K ++IV  F  + G
Sbjct:   32 SSVLTLDSTNF-TDTISKHDFIVVEFYAPWCGHCKKLRPEYEKAASILKSHDIPVVLAKVDANEEANKELATQYDIKGFPTLKILRNGGKSIQEYKGPREADGIAEYLKKQ---------SGPA--------------SVEIKSTEAANTFIGDKKIFIVGVFPKFSG 175          

HSP 2 Score: 68.5514 bits (166), Expect = 3.507e-11
Identity = 40/119 (33.61%), Postives = 59/119 (49.58%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVA--TVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFV-LQQIKALLKERLSGK 494
            PV  +  +  +  V N+   VL+EFYAPWCGHC+ L PI ++ A   K  A   +A LDA  +   +  + +RG+PT+           Y G R    I  F+   + KA  +E  +GK
Sbjct:  377 PVKVVVADTLQDIVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYKSDADIVIAKLDATANDIPSDTFDVRGYPTVYFRSASGKVEQYDGDRTKDDIISFIEKNRDKAAQQESANGK 495          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDI_ASPNG (Protein disulfide-isomerase OS=Aspergillus niger GN=pdiA PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 3
Query:  144 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            S V+ L  + F+S  +N +G+VL EF+APWCGHC+AL P +E+AAT LK     +  +D    + L +  G+ G+PT+K+F        YQGAR  + I  ++++Q
Sbjct:   25 SDVISLDQDTFES-FMNEHGLVLAEFFAPWCGHCKALAPKYEEAATELKAKNIPLVKVDCTAEEDLCRSQGVEGYPTLKIFRGVDSSKPYQGARQTESIVSYMIKQ 129          

HSP 2 Score: 74.3294 bits (181), Expect = 6.391e-13
Identity = 40/114 (35.09%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATV------LKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFVLQQIK 464
            PV  +  +++K  V++ +  VL+EFYAPWCGHC+AL P +++ A +      L    T+A +DA  +        I GFPT++++  G    P++Y G+R V+ +A FV +  K
Sbjct:  360 PVTVVVAHSYKDLVIDNDKDVLLEFYAPWCGHCKALAPKYDELAALYADHPDLAAKVTIAKIDATAND---VPDPITGFPTLRLYPAGAKDSPIEYSGSRTVEDLANFVKENGK 470          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA1_PONAB (Protein disulfide-isomerase OS=Pongo abelii GN=P4HB PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 3
Query:  150 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            V+ L  +NF ++ L A+  +LVEFYAPWCGHC+AL P + KAA  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:   26 VLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWL 129          

HSP 2 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 33/103 (32.04%), Postives = 48/103 (46.60%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            PV  L   NF+    +    V VEFYAPWCGHC+ L PIW+K     K    +     +   +  +   +  FPT+K F     +  +DY G R +    +F+
Sbjct:  368 PVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFL 470          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 3
Query:  150 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            V+ L  +NF ++ L A+  +LVEFYAPWCGHC+AL P + KAA  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:   28 VLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWL 131          

HSP 2 Score: 70.4774 bits (171), Expect = 9.229e-12
Identity = 34/103 (33.01%), Postives = 49/103 (47.57%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            PV  L   NF+    + N  V VEFYAPWCGHC+ L PIW+K     K    +     +   +  +   +  FPT+K F     +  +DY G R +    +F+
Sbjct:  370 PVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAIKVHSFPTLKFFPASVDRTVIDYNGERTLDGFKKFL 472          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 3
Query:  150 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            V+ L  +NF ++ L A+  +LVEFYAPWCGHC+AL P + KAA  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:   26 VLVLRKSNF-AEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWL 129          

HSP 2 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 33/103 (32.04%), Postives = 48/103 (46.60%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            PV  L   NF+    +    V VEFYAPWCGHC+ L PIW+K     K    +     +   +  +   +  FPT+K F     +  +DY G R +    +F+
Sbjct:  368 PVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFL 470          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  132 YGS*SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQIKALLKE 479
            + S S V++LT +NF S+ L +  V LV+FYAPWCGHC+ L P +  AA ++ G      +  +D    +S+  E+G+ G+PT+K+F  G    +Y G R+   IA +++ +   + KE
Sbjct:   13 FASCSKVLELTKDNFHSE-LKSIPVALVKFYAPWCGHCKKLAPEFTSAAQIISGKTNDVKLVKVDCTTQESICSEFGVSGYPTLKIFRNGDLDGEYNGPRNANGIANYMISRAGPVSKE 130          

HSP 2 Score: 71.2478 bits (173), Expect = 5.411e-12
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 3
Query:  144 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV--ATVAALDANEHQSLAQEYGIRGFPTIKMFVPGK--PPVDYQGARDVKPIAEFVLQQ 458
            S V +L   NF   V N    V+V F+A WCGHC+ L P +E+AA+ +K      +AA+DA  +  +   Y +RGFPTI     GK   PV Y+G RD   I +++ ++
Sbjct:  358 SAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATAN-DVPSPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYLARE 465          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: YEU5_SCHPO (Thioredoxin domain-containing protein C13F5.05, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13F5.05 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.123e-16
Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 3
Query:   72 LLVILTIFSFF-ARFNLSDALYGS*SPV-----VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAAL--DANEHQSLAQEYGIRGFPTIKMFVPGK-----PPVDYQGARDVKPIAEFVLQQIKALLK 476
            L  I T+F+ F A F+L   ++G  SP+     ++L   NF+ K + A G  LV FYAPWCG+C+ L P ++K A+ L  +  V A+  DA++++++  +Y ++GFPTIK+  P          DY G R  K + +FV   I + +K
Sbjct:    2 LFRIPTLFTLFLACFSLVSGVFGY-SPMFGSNTIELNSKNFR-KFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSIPSKVK 147          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.123e-16
Identity = 54/136 (39.71%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   57 MRRSQLLVILTIFSFFARFNLSDALYGS*SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVAT---VAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            +RR+ L + LT     A F            V+ L   NF  + L A+  +LVEFYAPWCGHC+AL P + KAA  LK   +   +A +DA E   LAQ+YG+RG+PTIK F  G    P +Y   R+   I  ++
Sbjct:    2 LRRALLCLALT-----ALFRAGAGAPDEEDHVLVLHKGNF-DEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFKNGDTASPKEYTAGREADDIVNWL 131          

HSP 2 Score: 68.1662 bits (165), Expect = 4.580e-11
Identity = 33/103 (32.04%), Postives = 48/103 (46.60%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPG--KPPVDYQGARDVKPIAEFV 449
            PV  L   NF+    +    V VEFYAPWCGHC+ L PIW+K     K    +     +   +  +   +  FPT+K F     +  +DY G R +    +F+
Sbjct:  370 PVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFL 472          
BLAST of FC921237 vs. ExPASy Swiss-Prot
Match: PDI_HUMIN (Protein disulfide-isomerase OS=Humicola insolens PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.772e-16
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  102 FARFNLSDALYGS*SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRGFPTIKMFVPGKPPVDYQGARDVKPIAEFVLQQ 458
            FA   L+ A   + S VVQL  + F    +  N +VL EF+APWCGHC+AL P +E+AAT LK     +A +D  E   L Q++G+ G+PT+K+F        Y+G R    I  ++++Q
Sbjct:    7 FALGLLAAAAVATASDVVQLKKDTFDD-FIKTNDLVLAEFFAPWCGHCKALAPEYEEAATTLKEKNIKLAKVDCTEETDLCQQHGVEGYPTLKVFRGLDNVSPYKGQRKAAAITSYMIKQ 125          

HSP 2 Score: 75.0998 bits (183), Expect = 3.747e-13
Identity = 44/120 (36.67%), Postives = 67/120 (55.83%), Query Frame = 3
Query:  147 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEK-----AATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKMFVPGK--PPVDYQGARDVKPIAEFVLQ--QIKALLKE 479
            PV  +   N+   VL+    VL+EFYAPWCGHC+AL P +E+     A +  K    +A +DA  +    +   I+GFPTIK++  G    PV Y G+R V+ + +F+ +  + KA + E
Sbjct:  356 PVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPDE---IQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYKAAISE 472          
The following BLAST results are available for this feature:
BLAST of FC921237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PDIA5_BOVIN7.296e-1732.69Protein disulfide-isomerase A5 OS=Bos taurus GN=PD... [more]
PDI_RICCO1.244e-1634.52Protein disulfide-isomerase OS=Ricinus communis PE... [more]
PDI_ASPNG1.625e-1639.62Protein disulfide-isomerase OS=Aspergillus niger G... [more]
PDIA1_PONAB1.625e-1644.76Protein disulfide-isomerase OS=Pongo abelii GN=P4H... [more]
PDIA1_MACFU1.625e-1644.76Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_HUMAN1.625e-1644.76Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
ERP60_SCHMA1.625e-1636.13Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
YEU5_SCHPO2.123e-1635.81Thioredoxin domain-containing protein C13F5.05, mi... [more]
PDIA1_BOVIN2.123e-1639.71Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
PDI_HUMIN2.772e-1639.17Protein disulfide-isomerase OS=Humicola insolens P... [more]

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Properties
Property NameValue
Genbank descriptionC32102G03EF RVDevelopN Citrus clementina cDNA clone C32102G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921237 ID=FC921237; Name=FC921237; organism=Citrus clementina; type=EST; length=676bp
GGAGTCTGGGAAGAAAGAAAAAGAAAATTAAAAATTTCTCGAGAAAGTGA
CGGAAAATGCGCAGATCACAATTGCTTGTCATTTTAACAATCTTCTCATT
CTTTGCGCGCTTCAATCTCAGTGATGCATTGTATGGTTCATAATCACCAG
TAGTTCAGCTCACTCCTAACAACTTCAAGTCCAAGGTCCTGAATGCCAAT
GGAGTTGTGTTGGTTGAGTTCTATGCACCTTGGTGTGGTCATTGTCAAGC
TTTGACACCCATATGGGAGAAAGCAGCTACTGTCTTGAAAGGTGTCGCTA
CTGTGGCAGCTCTTGATGCCAATGAACACCAGTCCCTTGCTCAGGAATAT
GGGATCAGAGGATTCCCAACCATAAAGATGTTTGTACCAGGGAAGCCTCC
AGTAGATTACCAAGGAGCTAGGGATGTCAAACCTATTGCAGAATTTGTAC
TTCAACAGATAAAGGCACTATTGAAGGAACGTCTAAGTGGGAAAGCAACT
GGAGGATCAAGTGATAAATCTAAATCTGATTCTAATGAGTCTATAGAATT
GAATTCTAGCAATTTTGATGAGTTGGTGCTCAAAAGCAAAGATCTTTGGA
TTGTGGAGTTTTTTGCACCTTGGTGTGGACACTGCAAAAAGCTGGCTCCT
GAGTGGAAAGAAGCTGCTAATAACTT
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