FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45
Identity = 88/198 (44.44%), Postives = 125/198 (63.13%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQ-SASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            +PA+I FGDS +D GNNNYL TL K N+ PYGRDF+  + TGRF NG++ TD  A+ LG K   PAY SP     ++L G +FAS GSG D  T+ +   I +  QL  ++ Y +KL  + G ++ + SII +A++++ +G+ D    Y+ NP+ N  YT   Y+ ++V+   SFIK +Y LGARKF +    PLGCL
Sbjct:   26 IPAVIAFGDSILDTGNNNYLMTLTKVNFYPYGRDFVTRRATGRFGNGRIPTDLIAEGLGIKNIVPAYRSPFLEPNDILTGVSFASGGSGLDPMTARIQGVIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDLMVSWTQSFIKELYNLGARKFAIMGTLPLGCL 223          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.080e-45
Identity = 87/204 (42.65%), Postives = 127/204 (62.25%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVY-TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            PL PAI+ FGDS VD GNNNY + T+F+A + PYG D  NH P GRF NGK+ +D  A  L  K + P +L P  T + ++ G  FASAG+GYDD+TS    AI +++Q   ++ Y ++L  + G K++  II +A+ +V +G  DF+ NYY  P   ++Y +   Y   +++  ++F+K +Y LG RK  V  LPP+GCL  Q
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPSQTIFRAKHVPYGIDLPNHSPNGRFSNGKIFSDIIATKLNIKQFVPPFLQPNLTDQEIVTGVCFASAGAGYDDQTSLTTQAIRVSEQPNMFKSYIARLKSIVGDKKAMKIINNALVVVSAGPNDFILNYYEVPSWRRMYPSISDYQDFVLSRLNNFVKELYSLGCRKILVGGLPPMGCLPIQ 234          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL1_ARATH (GDSL esterase/lipase At1g06990 OS=Arabidopsis thaliana GN=At1g06990 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.454e-44
Identity = 83/201 (41.29%), Postives = 122/201 (60.70%), Query Frame = 2
Query:   98 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            + PAI+ FGDS +D GNNNY+ T  +AN+PPYG +F  H  TGRF NGKL  DF A  +G K   P +L P  +  +++ G  FASAGSGYD+ T      +S+ +Q    R Y  +L+++ G +++ASI+ +A+ IV SG+ DF  N Y  P   +    + Y S +++   +F++ +Y +G RK  V  LPP+GCL  Q
Sbjct:   34 MFPAILVFGDSTIDTGNNNYIKTYIRANFPPYGCNFPGHNATGRFSNGKLIPDFIASLMGIKDTVPPFLDPHLSDSDIITGVCFASAGSGYDNLTDRATSTLSVDKQADMLRSYVERLSQIVGDEKAASIVSEALVIVSSGTNDFNLNLYDTPSRRQKLGVDGYQSFILSNVHNFVQELYDIGCRKIMVLGLPPVGCLPIQ 234          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.005e-43
Identity = 87/200 (43.50%), Postives = 123/200 (61.50%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            PAI  FGDS +D GNN+Y+ TL KAN+ PYG +F +  PTGRFCNGK+ +DF AD +G K   PAYL P  T ++LL G +FAS GSGYD  T  +  AI +++QL Y++EY  K+    G +++  II   + IV +GS D    YY   L   +Y  + Y+S + +  +SF   +Y  GA+K G   + P+GC+  Q+
Sbjct:   77 PAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPIVVSAIPMSKQLTYFQEYIEKVKGFVGKEKAEHIISKGLAIVVAGSDDLANTYYGEHLEEFLYDIDTYTSFMASSAASFAMQLYESGAKKIGFIGVSPIGCIPIQR 276          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.819e-43
Identity = 82/203 (40.39%), Postives = 126/203 (62.07%), Query Frame = 2
Query:   92 APLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            +P + A+  FGDS VD GNNNY+ TLF++N+PPYG+ F +   TGRF +GKLATDF   +LG K   PAYL+P     +LL G +FASAG G DDRT+  +  I++ +Q  Y+ E   K+  + G  ++  +IK+A++++ +G+ D + N Y + +L  + +   Y   L+     F++ +Y  GAR+  +  LPP+GCL  Q
Sbjct:   31 SPPITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKSSLTITMDKQWSYFEEALGKMKSLVGDSETNRVIKNAVFVISAGTNDMIFNVY-DHVLGSLISVSDYQDSLLTKVEVFVQRLYEAGARRITIAGLPPIGCLPVQ 232          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.514e-43
Identity = 84/197 (42.64%), Postives = 124/197 (62.94%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            +P IITFGDS VD GNNN+L T  K N+PPYG+DF     TGRF +G++ +D  A+ LG     PAYL+P+   ++LL G NFAS GSGYD  T+ L   +SL+ QL+ ++EY++KL  + G +++  ++K+++Y+V + S D    Y    +    Y    Y+  L +  S F+  +YGLGAR+ GV S  P+GC+
Sbjct:   48 IPGIITFGDSIVDSGNNNHLRTALKCNFPPYGKDFPGKIATGRFSDGRVPSDIVAERLGIAETIPAYLNPKLKNEDLLKGVNFASGGSGYDPLTAKLVKVVSLSDQLKNFQEYKNKLKVIVGEEKANFLVKNSLYLVVASSNDIAHTYTARSI---KYNKTSYADYLADSASKFVSALYGLGARRIGVFSAVPVGCV 241          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL39_ARATH (GDSL esterase/lipase At2g24560 OS=Arabidopsis thaliana GN=At2g24560 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.515e-42
Identity = 84/204 (41.18%), Postives = 122/204 (59.80%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTP-EQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            PL PAI+ FGDS VD GNNNY + T+FKA + PYG D  NH+ +GRF NGK+ +D  A  L  K + P +L P  + + ++ G  FASAG+GYDD TS    AI +  Q + ++ Y ++L  + G K++  IIK+A+ ++ +G  DF+ NYY  P     +     Y   ++    +F++ +Y LG RK  V  LPP+GCL  Q
Sbjct:   30 PLFPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGIDLPNHKASGRFTNGKIFSDIIATKLNIKQFVPPFLQPNLSDQEIVTGVCFASAGAGYDDHTSLSTQAIRVLDQQKMFKNYIARLKSIVGDKKAMEIIKNALVVISAGPNDFILNYYDIPSRRLEFPHISGYQDFVLQRLDNFVRELYSLGCRKIMVGGLPPMGCLPIQ 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.668e-41
Identity = 83/209 (39.71%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   80 AQDAAPLVPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVY-TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            A    PL PAI+ FGDS  D GNNNY +  +FKAN+ PYG D   H+  GRF NGKL +D  +  L  K + P +L P  + ++++ G  FASAG+GYDD TS  + AI ++QQ   ++ Y ++L  + G K++  II +A+ ++ +G  DF+ N+Y  P+    Y T   Y   ++     F++ +Y LG R   V  LPP+GCL  Q
Sbjct:   24 ANTTQPLFPAILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFASAGAGYDDETSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIINNALVVISAGPNDFILNFYDIPIRRLEYPTIYGYQDFVLKRLDGFVRELYSLGCRNILVGGLPPMGCLPIQ 232          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41
Identity = 82/204 (40.20%), Postives = 122/204 (59.80%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVY-TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            PL PAI+ FGDS VD GNNNY + T+FKA + PYG D   H+  GR+ NGK+ +D  A  L  K   P +L P  + ++++ G +FASAG+GYDDR+S  + AI ++QQ   ++ Y ++L  + G K++  II +A+ ++ +G  DF+ N+Y  P     Y T   Y   ++     F++ +Y LG R   V  LPP+GCL  Q
Sbjct:   30 PLFPAILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQPNISHQDIVTGVSFASAGAGYDDRSSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIINNALVVISAGPNDFILNFYDIPTRRLEYPTIHGYQEFILKRLDGFVRELYSLGCRNIVVGGLPPMGCLPIQ 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.026e-40
Identity = 84/201 (41.79%), Postives = 123/201 (61.19%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +PA+I FGDS +D GNNN + TL K+N+PPYGRDF    PTGRF +GK+ +D  A++LG     P YL       +LL G  FAS GSGYD  TS L   +S++ QL+Y++EY +K+ +  G ++   I++ ++++V S S D  + Y+V  +    Y    Y+  LV + S FIK +  LGA+  G+ S  P+GCL  Q+
Sbjct:   30 IPALIVFGDSIMDTGNNNDIPTLLKSNFPPYGRDFPGAIPTGRFSDGKVPSDIIAESLGIAKTLPPYLGSNLKPHDLLKGVIFASGGSGYDPLTSTLLSVVSMSDQLKYFQEYLAKIKQHFGEEKVKFILEKSVFLVVSSSNDLAETYWVRSV---EYDRNSYAEYLVELASEFIKELSELGAKNIGLFSGVPVGCLPAQR 227          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL89_ARATH1.074e-4544.44GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL23_ARATH4.080e-4542.65GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]
GDL1_ARATH3.454e-4441.29GDSL esterase/lipase At1g06990 OS=Arabidopsis thal... [more]
GDL4_ARATH1.005e-4343.50GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL47_ARATH3.819e-4340.39GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL90_ARATH6.514e-4342.64GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
GDL39_ARATH5.515e-4241.18GDSL esterase/lipase At2g24560 OS=Arabidopsis thal... [more]
GDL41_ARATH4.668e-4139.71GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]
GDL42_ARATH6.097e-4140.20GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL52_ARATH3.026e-4041.79GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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