FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.741e-40
Identity = 83/201 (41.29%), Postives = 118/201 (58.71%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNY-LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYT-PEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            PL PAI+ FGDS VD GNNNY L T+F+A + PYG D  + +  GRF NGKL +D  A  L  K + P +L P  + +++L G  FASAG+GYDD TS    AI +++Q   ++ Y ++L  + G K++  II +A  +V +G  DF+ NYY  P     Y     Y   ++    +F++ +Y LG R   V  LPP+GCL
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAFVVVSAGPNDFILNYYEIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCL 231          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 8.804e-40
Identity = 83/201 (41.29%), Postives = 118/201 (58.71%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNY-LATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYT-PEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            PL PAI+ FGDS VD GNNNY L T+F+A + PYG D  + +  GRF NGKL +D  A  L  K + P +L P  + +++L G  FASAG+GYDD TS    AI +++Q   ++ Y ++L  + G K++  II +A  +V +G  DF+ NYY  P     Y     Y   ++    +F++ +Y LG R   V  LPP+GCL
Sbjct:   31 PLFPAILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLSTQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAFVVVSAGPNDFILNYYDIPSRRLEYPFISGYQDFILKRLENFVRELYSLGVRNVLVGGLPPMGCL 231          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.150e-39
Identity = 85/214 (39.72%), Postives = 125/214 (58.41%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNN-YLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-------------YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            PAII FGDS VD GNN+  + TL + NYPPYG DF    PTGRFCNGK+ATDF A   G K   PAY +P    ++LL G  FAS G+GY   T+             +L   I+L+QQL+ + EY  K+ K+ G +++  IIK+++++V  GS D    Y+  P + + Y    +++++ +   SF + ++  GAR+  V   PP+GC+  Q+
Sbjct:   46 PAIIVFGDSIVDAGNNDDIMTTLARCNYPPYGIDFDGGIPTGRFCNGKVATDFIAGKFGIKPSIPAYRNPNLKPEDLLTGVTFASGGAGYVPFTTQLSTYLFIYKPLLFLKGGIALSQQLKLFEEYVEKMKKMVGEERTKLIIKNSLFMVICGSNDITNTYFGLPSVQQQYDVASFTTLMADNARSFAQKLHEYGARRIQVFGAPPVGCVPSQR 259          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.562e-39
Identity = 78/202 (38.61%), Postives = 118/202 (58.42%), Query Frame = 2
Query:   98 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            ++PA+I FGDS VD G NN + T+ K ++ PYG +F +   TGRFC+G++  D  A+ LG K+  PAYL P    K+LL G +FAS GSGYD  T  L   ISL  QL Y+ EY  K+  + G  +   I+ ++++++ +GS D    YY        Y  + Y++++ +  S F+  +YG G R+  V   PP+GC+  Q+
Sbjct:   40 IIPAVIAFGDSIVDTGMNNNVKTVVKCDFLPYGINFQSGVATGRFCDGRVPADLLAEELGIKSIVPAYLDPNLKSKDLLTGVSFASGGSGYDPITPKLVAVISLEDQLSYFEEYIEKVKNIVGEARKDFIVANSLFLLVAGSDDIANTYY-TLRARPEYDVDSYTTLMSDSASEFVTKLYGYGVRRVAVFGAPPIGCVPSQR 240          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.169e-38
Identity = 82/212 (38.68%), Postives = 121/212 (57.08%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKL----------AKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQKL 706
            +PA+  FGDS  D GNNN L T  K+NY PYG DF     TGRF NG +A+D+ A  +G K   PAYL P+    +LL G +FAS G+GY+  TS   +AI +  QL Y+++Y  K+           K+AG +++  +I   + IV  GS D +  Y+ +         + Y++++ +  +SF+  +YG GAR+ GV   PPLGC+  Q+L
Sbjct:  202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADSAASFVLQLYGYGARRIGVIGTPPLGCVPSQRL 413          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EXL1_ARATH (GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana GN=EXL1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.241e-38
Identity = 81/202 (40.10%), Postives = 119/202 (58.91%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLN-HAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            VPA+I FGDS VD GNN+ + T  + +Y PYG DF     TGRF NGK+  D  A+ LG K   PAY +P    + LL G  FAS G+GY   T+ +    I L QQL Y+ EY  KL ++ G K++  IIK+++++V  GS D   +++  P +   YT   +++++ +   SF + +YG GAR+  V   PP+GC+  Q+
Sbjct:   50 VPAVIVFGDSIVDAGNNDDMITEARCDYAPYGIDFDGGVATGRFSNGKVPGDIVAEELGIKPNIPAYRNPNLKPEELLTGVTFASGGAGYVPLTTKIAVGGIPLPQQLIYFEEYIEKLKQMVGEKRTKFIIKNSLFVVICGSNDIANDFFTLPPVRLHYTVASFTALMADNARSFAQTLYGYGARRILVFGAPPIGCVPSQR 251          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.090e-37
Identity = 78/201 (38.81%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P     +LL G  FAS G+GYD  T+ +   IS+  QL Y++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+  Q+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQA---HRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQR 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37
Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKN------LLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQKL 706
            +PA+  FGDS  D GNNN L T  K NY PYG DF     TGRF NG++A+D+ +  LG K   PAY+  +    N      LL G +FAS G+GY  +TS      ++  QL Y+++Y+ ++ K+ G K++  I+     IV +GS D +  Y+ N   +     + +++M+ +  +SF+  +YG GAR+ GV   PP+GC   Q++
Sbjct:  123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRV 330          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37
Identity = 76/201 (37.81%), Postives = 119/201 (59.20%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ +G     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+  QL Y++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGA+K GV S  P+GC+  Q+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKIGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQA---HRYDRTSYANFLADSAVHFVRELHKLGAQKIGVFSAVPVGCVPLQR 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37
Identity = 77/201 (38.31%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++     ++LL G  FAS G+GYD  T+ +   IS+  QL Y++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+  Q+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGDATGRFSDGRVPSDLIAEKLGLAKTLPAYMNSYLKPEDLLKGVTFASRGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQA---HRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQR 225          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL43_ARATH6.741e-4041.29GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GDL44_ARATH8.804e-4041.29GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
EXL2_ARATH1.150e-3939.72GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]
EXL3_ARATH2.562e-3938.61GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
APG_ARATH2.169e-3838.68Anter-specific proline-rich protein APG OS=Arabido... [more]
EXL1_ARATH8.241e-3840.10GDSL esterase/lipase EXL1 OS=Arabidopsis thaliana ... [more]
GDL55_ARATH4.090e-3738.81GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]
APG_BRANA6.976e-3737.02Anther-specific proline-rich protein APG (Fragment... [more]
GDL56_ARATH9.111e-3737.81GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]
GDL24_ARATH9.111e-3738.31GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
back to top