FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36
Identity = 86/209 (41.15%), Postives = 120/209 (57.42%), Query Frame = 2
Query:   74 GYAQD--AAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            GYAQ    +  V A+  FGDS +D GNNN L TL K N+ PYGR+FI  + TGRF NG++ +D  A+ L  K   PAY  P  +  +L  G  FAS GSG D+RT+     I +  Q++ ++EY  KL  V   K+   +II +A+Y++ +G+ D    Y   P L   YT   Y+ +LV    + +K++Y +GARKF V    PLGCL
Sbjct:   22 GYAQQFSGSVAVSALFAFGDSILDTGNNNNLNTLSKCNFFPYGRNFIGGKATGRFGNGRVFSDMIAEGLNVKKLLPAYRDPNLSKNDLPTGVCFASGGSGLDERTARSQGVIWVPDQVKDFKEYIMKLNGVVRDKRKVNAIISNAVYLISAGNNDLAITY---PTLMAQYTVSTYTDLLVTWTDNLLKSLYAMGARKFAVLGTLPLGCL 227          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36
Identity = 77/201 (38.31%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+  QL  ++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+  Q+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLINFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQ---THRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQR 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36
Identity = 77/201 (38.31%), Postives = 118/201 (58.71%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            +PA+I FGDS +D GNNN L TL K N+PPYG+D+     TGRF +G++ +D  A+ LG     PAY++P    ++LL G  FAS G+GYD  T+ +   IS+  QL  ++EY SK+ +  G +++  I++ + ++V S S D    Y         Y    Y++ L +    F++ ++ LGARK GV S  P+GC+  Q+
Sbjct:   28 IPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLINFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYLAQ---THRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQR 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36
Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            V A+  FGDS +D GNNN L ++ K N+ PYGRDFI  + TGRF NG++ +D  A+ LG K   PAY  P     +L  G  FAS GSG D  T+    +I ++ Q+  ++ Y ++L  V G+++ A ++I +A+Y++ +G+ D    Y+        YT   Y+  LV+     IK++Y +GARKF V    PLGCL
Sbjct:   33 VSALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSGLDPITARTTGSIWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVYLISAGNNDIAITYFTTGARRLQYTLPAYNDQLVSWTRDLIKSLYDMGARKFAVMGTLPLGCL 230          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EXL5_ARATH (GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana GN=EXL5 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.007e-35
Identity = 83/216 (38.43%), Postives = 119/216 (55.09%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATD---------------FTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQKL 706
            PA++ FGDS VD GNNNYL TL K NY PYG +F +  PTGRF NG++ +D                +A+ LG K   PAY        +L  G +FAS G+G D  TS L   +S   Q++ ++ Y+ KL  V G  ++  I+ +++ +V  G+ D    Y ++    ++ TP+ Y+S LV     FIK++Y  GARKF V  + PLGCL   +L
Sbjct:   28 PALLAFGDSMVDTGNNNYLLTLMKGNYWPYGWNFDSKIPTGRFGNGRVFSDVVGIILKSSLQCFFVISAEGLGIKRIVPAYRKLYIAPSDLKTGVSFASGGAGVDPVTSKLLRVLSPADQVKDFKGYKRKLKGVVGRSKAKKIVANSVILVSEGNNDIGITYAIHDAGMRLMTPKVYTSKLVGWNKKFIKDLYDHGARKFAVMGVIPLGCLPMSRL 243          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.455e-34
Identity = 79/197 (40.10%), Postives = 115/197 (58.38%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLS-PQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            A+  FGDS +D GNNN+L TL K NY PYG  F    PTGRF NG++ TD  A+ L  K   PAY    + + ++L  G  FAS GSG DD TS     +S   Q++ +++Y  KL +V   K+    I+ +A++++  G+ D    Y+V P L ++ +   Y+S +V     F+K++Y LGARKF V  + P+GCL
Sbjct:   29 ALFAFGDSVLDTGNNNFLLTLLKGNYWPYGLSFDYKFPTGRFGNGRVFTDIVAEGLQIKRLVPAYSKIRRISSEDLKTGVCFASGGSGIDDLTSRTLRVLSAGDQVKDFKDYLKKLRRVVKRKKKVKEIVSNAVFLISEGNNDL--GYFVAPALLRLQSTTTYTSKMVVWTRKFLKDLYDLGARKFAVMGVMPVGCL 223          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34
Identity = 80/200 (40.00%), Postives = 122/200 (61.00%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSK-QSASIIKDAIYIVGSGSGDFLQNYYVNPLL--NKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            VP    FGDS VD GNNN L ++ ++NY PYG DF    PTGRF NGK   D  A+ LGF  Y PAY +   +G+ +L G N+ASA +G  + T   L   IS + Q++ Y+   S++ ++ G + ++A  +K  IY VG GS D+L NY++      ++ +TPEQY++ L++ +S+ +  +Y  GARKF ++ +  +GC
Sbjct:   30 VPCFFVFGDSLVDNGNNNGLISIARSNYFPYGIDF--GGPTGRFSNGKTTVDVIAELLGFNGYIPAYNT--VSGRQILSGVNYASAAAGIREETGRQLGQRISFSGQVRNYQTTVSQVVQLLGDETRAADYLKRCIYSVGLGSNDYLNNYFMPTFYSSSRQFTPEQYANDLISRYSTQLNALYNYGARKFALSGIGAVGC 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34
Identity = 79/209 (37.80%), Postives = 122/209 (58.37%), Query Frame = 2
Query:   74 GYAQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRT-SYLNHAISLTQQLQYYREYQSKLAKVAGSKQSAS-IIKDAIYIVGSGSGDFLQNYYVNPL--LNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            G+   A P VP    FGDS VD GNNN L ++ +A+Y PYG DF    PTGRF NG+   D   + LGF  Y PAY +   +G+ +L G N+ASA +G  + T + L   I+ + Q++ Y+   +++ ++ G + +A+  +K  IY VG GS D+L NY++      ++ YTPEQY+  L++ +   +  +Y  GARKF +  +  +GC
Sbjct:   21 GFKVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYFPYGIDF--GGPTGRFSNGRTTVDVLTELLGFDNYIPAYST--VSGQEILQGVNYASAAAGIREETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAADYLKRCIYSVGMGSNDYLNNYFMPQFYSTSRQYTPEQYADDLISRYRDQLNALYNYGARKFALVGIGAIGC 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: EXL4_ARATH (GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana GN=EXL4 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34
Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLN-KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQKL 706
            PA++ FGDS +D GNNN+L T  K N  PYGR F   + TGRF NG++ +D  A+ LG K   PAY     +  +L  G  FAS G+G D  TS L   ++   Q+  ++ Y  KL   AG  +++SI+ +A+ +V  G+ D   +Y+  P    +  TP +Y++ L      F+K +Y  GARKF V  + PLGCL   ++
Sbjct:   27 PALLAFGDSILDTGNNNFLLTFMKGNIWPYGRSFSMRRATGRFGNGRVFSDIVAEGLGIKKILPAYRKLFNSPSDLRTGVCFASGGAGVDPVTSKLLRVLTPKDQVNDFKGYIRKLKATAGPSRASSIVSNAVILVSQGNNDIGISYFGTPTAAFRGLTPNRYTTKLAGWNKQFMKELYDQGARKFAVMGVIPLGCLPMTRI 228          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.527e-34
Identity = 80/205 (39.02%), Postives = 112/205 (54.63%), Query Frame = 2
Query:   89 AAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYL-NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYY---VNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            A   +PA   FGDS VD GNNNYLATL KANY P G DF    PTGRF NG+   D     LG     P YL+P  +G  +L G N+AS GSG  + T  L    I++  QL  +   +  +    G  ++A + + AI+ V +GS D + NY+   ++ L  KV  PE +   +++ F   +  +Y LGARK  V ++ P+GC+
Sbjct:   24 AGKKIPANFVFGDSLVDAGNNNYLATLSKANYVPNGIDF--GSPTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIFSVTTGSNDLINNYFTPVISTLQRKVVAPEVFVDTMISKFRLQLTRLYQLGARKIVVINIGPIGCI 226          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL5_ARATH1.190e-3641.15GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
GDL26_ARATH1.554e-3638.31GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH1.554e-3638.31GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
GDL30_ARATH5.906e-3639.39GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
EXL5_ARATH1.007e-3538.43GDSL esterase/lipase EXL5 OS=Arabidopsis thaliana ... [more]
EXL6_ARATH1.455e-3440.10GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL15_ARATH3.240e-3440.00GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GDL14_ARATH3.240e-3437.80GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
EXL4_ARATH4.232e-3438.12GDSL esterase/lipase EXL4 OS=Arabidopsis thaliana ... [more]
GDL64_ARATH5.527e-3439.02GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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