FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.219e-34
Identity = 74/197 (37.56%), Postives = 115/197 (58.38%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSY-LNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            A   FGDS VD GNNNYL T  +A+ PPYG DF   +PTGRF NG    D  ++ +G +     YLSP+  G++LL GANFASAG G  + T +   + I + QQL Y+++YQ +++++ G  Q+  ++  A+ ++  G  DF+ NY++ P    ++ +T   Y  +L++ +   +  +  LG  +  VT   PLGC
Sbjct:   28 AFFVFGDSLVDSGNNNYLVTTARADSPPYGIDFPTRRPTGRFSNGLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGILNDTGFQFINIIRMYQQLDYFQQYQQRVSRLIGKPQTQRLVSQALVLITVGGNDFVNNYFLFPYSARSRQFTLPDYVRLLISEYKKILLRLNSLGVGRVLVTGAGPLGC 224          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.608e-33
Identity = 73/197 (37.06%), Postives = 116/197 (58.88%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSG-YDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPL--LNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            A   FGDS VD GNN+YL T  +A+  PYG D+   +PTGRF NG    D  ++ +G  +  P YLSP  TG+NLL+GANFASAG G  +D      + I +++Q++Y+ +YQ +++ + G + +  ++  A+ ++  G  DF+ NYY+ P    ++ Y    Y   L++ +   ++ +Y LGAR+  VT    +GC
Sbjct:   29 AFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIISEAIGMPSTLP-YLSPHLTGENLLVGANFASAGIGILNDTGIQFVNIIRISKQMEYFEQYQLRVSALIGPEATQQLVNQALVLITLGGNDFVNNYYLIPFSARSRQYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGC 224          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.743e-33
Identity = 76/199 (38.19%), Postives = 120/199 (60.30%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGY--DDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPE--QYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            A   FGDS VD GNNNYL T  +A+ PPYG D+   +PTGRF NG    D  ++ +G +   P  LSP+ TG+ LLIGANFASAG G   D    +LN  + + +Q + ++EYQ +++++ GS ++  ++  A+ ++  G  DF+ NY+  P+  +       ++S +L++ +   + ++Y LGAR+  VT   PLGC+
Sbjct:   31 AFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTGRPTGRFSNGLNLPDIISEQIGSEPTLP-ILSPELTGEKLLIGANFASAGIGILNDTGVQFLN-ILRIGRQFELFQEYQERVSEIIGSDKTQQLVNGALVLMTLGGNDFVNNYFF-PISTRRRQSSLGEFSQLLISEYKKILTSLYELGARRVMVTGTGPLGCV 226          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 76/199 (38.19%), Postives = 119/199 (59.80%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGY--DDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPL--LNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            A + FGDS VD GNN++LAT  +A+  PYG DF  H+PTGRF NG    D  ++ LG ++  P YLSP      LL GANFASAG G   D    +LN  I +T+QL+Y+ +Y+ +++ + G ++   ++  A+ ++  G  DF+ NYY+ P    ++ ++   Y   +++ +   ++ MY LGAR+  VT   P+GC+
Sbjct:   30 AFLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLISEHLGQESPMP-YLSPMLKKDKLLRGANFASAGIGILNDTGIQFLN-IIRITKQLEYFEQYKVRVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRKVLRKMYDLGARRVLVTGTGPMGCV 226          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31
Identity = 85/221 (38.46%), Postives = 117/221 (52.94%), Query Frame = 2
Query:   74 GYAQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRT-------SYLNHAIS---LTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYV--NPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            G ++D  PL PA   FGDS VD GNNNY+ TL +ANY PYG DF    PTGRFCNG+   D+ A  LG     P YLSP + G+N L G N+ASA +G  D T       +  N  IS   +T +L+  R +Q+              +  +I  +  GS D++ NY +      ++ Y+ E Y+ +L+   S+ I  +Y LGARK  +    PLGC+  Q
Sbjct:   19 GQSRDHQPLAPAFFVFGDSLVDSGNNNYIPTLARANYFPYGIDF--GFPTGRFCNGRTVVDYGATYLGL-PLVPPYLSPLSIGQNALRGVNYASAAAGILDETGRHYGARTTFNGQISQFEITIELRLRRFFQN-------PADLRKYLAKSIIGINIGSNDYINNYLMPERYSTSQTYSGEDYADLLIKTLSAQISRLYNLGARKMVLAGSGPLGCIPSQ 229          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31
Identity = 79/206 (38.35%), Postives = 115/206 (55.83%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDF--INHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRT-SYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASII-KDAIYIVGSGSGDFLQNY---YVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            A   FGDS VD GNNNYL TL +AN PP G DF      PTGRF NG+   D   + LG ++YA  YL+P A+G+ LL G N+AS G G  + T S   + + +  Q+ Y+   + +  K+ G  ++   I K +++ V  GS DFL NY   +V        TPE +   +++   + +K +Y + ARKF V ++ P+GC+  QK
Sbjct:   34 ASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLFSVVIGSNDFLNNYLVPFVAAQARLTQTPETFVDDMISHLRNQLKRLYDMDARKFVVGNVAPIGCIPYQK 239          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31
Identity = 70/211 (33.18%), Postives = 120/211 (56.87%), Query Frame = 2
Query:   80 AQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP---LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            + +   + PA+  FGDS VD GNNN+L +L ++NY PYG DF  +QPTGRF NGK   DF  + LG     PA++     G ++L G N+ASA  G  + T  +L    S+ +Q++ + +   ++++    +     +  ++ +V  G+ D++ N Y+ P   L + +Y P  ++ +L++ F++ +  +YG G RKF +  + PLGC+  Q
Sbjct:   40 SSETTAMFPAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPE-IPAFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVVSLGNNDYINN-YLKPRLFLSSSIYDPTSFADLLLSNFTTHLLELYGKGFRKFVIAGVGPLGCIPDQ 248          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL65_ARATH (GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31
Identity = 76/202 (37.62%), Postives = 114/202 (56.44%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSK-QSASIIKDAIYIVGSGSGDFLQNYY--VNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            P+ P    FGDS VD GNNN L +L +ANY PYG DF  + PTGRF NGK   D   + LGF  Y   Y   +A G+++L G N+ASA +G  + T   L   I+   Q+  +    S++  + G + ++A+ +   IY +G GS D+L NY+  V       Y+P+ Y++ L+N ++  ++ MY  GARKF +  +  +GC
Sbjct:   24 PIAPCYFIFGDSLVDSGNNNRLTSLARANYFPYGIDF-QYGPTGRFSNGKTTVDVITELLGFDDYITPY--SEARGEDILRGVNYASAAAGIREETGRQLGARITFAGQVANHVNTVSQVVNILGDENEAANYLSKCIYSIGLGSNDYLNNYFMPVYYSTGSQYSPDAYANDLINRYTEQLRIMYNNGARKFALVGIGAIGC 222          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL35_ARATH (GDSL esterase/lipase At2g19010 OS=Arabidopsis thaliana GN=At2g19010 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29
Identity = 76/207 (36.71%), Postives = 113/207 (54.59%), Query Frame = 2
Query:   77 YAQDAAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLN--KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            Y Q A    P    FGDS  D GNNN L +  K N+ PYG DF    PTGRF NG+   D   +  GFK + P +   +A+ +    G N+AS GSG  + TS +L   IS+ +QLQ ++        +  +   A  ++  +Y++  GS D++ NY+++   N  + YTP+QY+  L+ I+ S +KN++ LGARK  V  L  +GC
Sbjct:   20 YGQQA----PCFFVFGDSMSDNGNNNNLKSEAKVNFSPYGNDFPKG-PTGRFSNGRTIPDIIGELSGFKDFIPPFA--EASPEQAHTGMNYASGGSGLREETSEHLGDRISIRKQLQNHK------TSITKANVPAERLQQCLYMINIGSNDYINNYFMSKPYNTKRRYTPKQYAYSLIIIYRSHLKNLHRLGARKVAVFGLSQIGC 213          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29
Identity = 77/202 (38.12%), Postives = 110/202 (54.46%), Query Frame = 2
Query:   95 PLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSAS-IIKDAIYIVGSGSGDFLQNYYVNPLLN--KVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            P+ P    FGDS VD GNNN L +L +ANY PYG DF    PTGRF NG    D  A  LGF+ Y   Y S  A G+++L G N+ASA +G  D T   L   I+   Q+  +    S++  + G +  AS  +   IY +G GS D+L NY++    +    ++PE Y+  LV  ++  ++ +Y  GARKF +  +  +GC
Sbjct:   25 PIAPCYFIFGDSLVDNGNNNQLQSLARANYFPYGIDFA-AGPTGRFSNGLTTVDVIAQLLGFEDYITPYAS--ARGQDILRGVNYASAAAGIRDETGRQLGGRIAFAGQVANHVNTVSQVVNILGDQNEASNYLSKCIYSIGLGSNDYLNNYFMPTFYSTGNQFSPESYADDLVARYTEQLRVLYTNGARKFALIGVGAIGC 223          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL77_ARATH7.219e-3437.56GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
LTL1_ARATH1.608e-3337.06GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL67_ARATH2.743e-3338.19GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GDL79_ARATH1.042e-3238.19GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GLIP7_ARATH1.153e-3138.46GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL58_ARATH1.153e-3138.35GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
GDL75_ARATH1.966e-3133.18GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL65_ARATH2.568e-3137.62GDSL esterase/lipase At4g18970 OS=Arabidopsis thal... [more]
GDL35_ARATH1.409e-2936.71GDSL esterase/lipase At2g19010 OS=Arabidopsis thal... [more]
GDL82_ARATH1.840e-2938.12GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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