FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 73/199 (36.68%), Postives = 112/199 (56.28%), Query Frame = 2
Query:  119 FGDSAVDVGNNNYLATLFKANYPPYGRDFI--NHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYL-NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLL-----NKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            FGDS VDVGNNNY+ TL KA+  PYG DF   N QPTGRF NG+  +D   + LG K+  P YL P      +  G N+AS  +G  D T  L    + L +Q+  + + +  + +V G   +  ++K+A++ +  GS D L   Y+ P +     +K+ T     SM++++ ++ +K ++ LG RKF V  + PLGC+
Sbjct:   29 FGDSLVDVGNNNYIFTLSKADSSPYGIDFAPSNGQPTGRFTNGRTISDIVGEALGAKSPPPPYLEPNTEANTIRNGINYASGAAGILDDTGLLFIGRVPLREQVSNFEKSREYMVRVIGENGTKEMLKNAMFTITIGSNDILN--YIQPSIPFFSQDKLPTDVLQDSMVLHL-TTHLKRLHQLGGRKFVVVGVGPLGCI 224          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            VP    FGDS  D GNNN L T  K NY PYG DF    PTGRF NG+   D  A+ + F  Y P +    A+ +   IG N+AS G G  + TS +L   IS  +Q++ +R      AKV   K     +   +Y +  GS D+L NY++    + NK ++ ++Y+  L+  + S++K++Y LGARK  V  +  LGC
Sbjct:   29 VPCYFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDFA-RGPTGRFSNGRNIPDIIAELMRFSDYIPPFTG--ASPEQAHIGINYASGGGGIREETSQHLGEIISFKKQIKNHRS-MIMTAKVPEEK-----LNKCLYTINIGSNDYLNNYFMPAPYMTNKKFSFDEYADSLIRSYRSYLKSLYVLGARKVAVFGVSKLGC 218          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 2
Query:   98 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSG-YDDRTSYLNHAISLTQQLQYYREYQSKLA-KVAGSKQSASIIKDAIYIVGSGSGDFLQNYYV-NPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            +VPA+  FGDS +D GNNN + +  KANY PYG DF N  PTGRFCNG    D  A  LG     PAY   +ATG  +L G N+ASA +G   D        I   QQ+  +     ++A K  G+   A  +  +++ +G GS D+L NY + N      Y  +Q+  +LV  ++  +  +Y LG RKF V  L  +GC+
Sbjct:   52 IVPALFVFGDSLIDNGNNNNIPSFAKANYFPYGIDF-NGGPTGRFCNGLTMVDGIAQLLGL-PLIPAY--SEATGDQVLRGVNYASAAAGILPDTGGNFVGRIPFDQQIHNFETTLDQVASKSGGAVAIADSVTRSLFFIGMGSNDYLNNYLMPNFPTRNQYNSQQFGDLLVQHYTDQLTRLYNLGGRKFVVAGLGRMGCI 248          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27
Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDF--INHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYL-NHAISLTQQLQYYREYQSKLAKVAGSKQSAS-IIKDAIYIVGSGSGDFLQNYYVNPLLNK----VYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            A   FGDS VD GNNNYL+TL +AN  P G DF      PTGRF NG+   D   + LG   YA  +L+P A GK LL G N+AS G G  + T  +  + + +  Q+ ++   + +   + G +++   I K +I+ +  G+ DFL N Y+ PLL+       TP+ +   ++      +  +Y L ARKF + ++ P+GC+  QK
Sbjct:   48 ASFIFGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIFSITIGANDFLNN-YLFPLLSVGTRFTQTPDDFIGDMLEHLRDQLTRLYQLDARKFVIGNVGPIGCIPYQK 253          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27
Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 2
Query:   98 LVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            LVP    FGDS  D GNNN L TL K NY PYG DF    PTGRF NG+   DF A+ L      P +   +A+ +    G N+AS G+G  + TS +L   IS  +Q+  +R    K+   AG       +K  +Y +  GS D+L NY++      N+ ++ ++Y+  L+  + S++K++Y LGARK  V  +  LGC
Sbjct:   27 LVPCYFVFGDSVFDNGNNNELDTLAKVNYSPYGIDFA-RGPTGRFSNGRNIPDFIAEELRISYDIPPF--TRASTEQAHTGINYASGGAGLLEETSQHLGERISFEKQITNHR----KMIMTAGVPPEK--LKKCLYTINIGSNDYLNNYFMPAPYTTNENFSFDEYADFLIQSYRSYLKSLYVLGARKVAVFGVSKLGC 217          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27
Identity = 73/198 (36.87%), Postives = 110/198 (55.56%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYL--ATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            V A+  FGDS +D GNNNY+   TL +AN+PPYG+ F    PTGRF +G+L +DF A+        P +L P  + K L  G NFASAG+G    T +    I+L  QL +Y++ +       G ++S   I  A+Y++  GS D+   +  N  L    +  Q+  +++   ++FI  +Y +G RKFG  ++P LGC
Sbjct:   46 VTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFFG-LPTGRFSDGRLISDFIAEYANLPLIPP-FLEPGNSQKKLY-GVNFASAGAGALVET-FQGSVINLRTQLDHYKKVERLWRTNFGKEESKKRISRAVYLISIGSNDYSSIFLTNQSLP--ISMSQHVDIVIGNLTTFIHEIYKIGGRKFGFLNVPDLGC 237          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27
Identity = 68/204 (33.33%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSY-LNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKV--YTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            VPA+   GDS VD GNNN+L T+ +AN+ PYG D +N+QPTGRF NG    D  A  L   +  P +  P  +G  +L G N+ASA +G  D + Y      SL QQ+       S+L  +   +     +  ++ ++  GS D++ NY +  L +    + P  ++++L++ ++  +  +Y LG RK  +  + PLGC+  Q+
Sbjct:   39 VPAMFVLGDSLVDAGNNNFLQTVARANFLPYGID-MNYQPTGRFSNGLTFIDLLARLLEIPS-PPPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQR 240          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL17_ARATH (GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.487e-26
Identity = 72/205 (35.12%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRT-SYLNHAISLTQQLQYYREYQSKLAKV--AGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKV--YTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQ 700
            VP +  FGDS VD GNNN L +L +ANY PYG DF     TGRF NG+   D  A  LGF+ Y P Y   +  G+ +L GANFAS  +G  D T   L    S+ QQ++ Y     ++ +     + +    +   I+  G GS D+L NY++    +    Y  + ++  L+  ++  +  +Y  GARK  VT +  +GC+  Q
Sbjct:   32 VPCLFIFGDSLVDNGNNNRLLSLARANYRPYGIDF-PQGTTGRFTNGRTYVDALAQILGFRNYIPPY--SRIRGQAILRGANFASGAAGIRDETGDNLGAHTSMNQQVELYTTAVQQMLRYFRGDTNELQRYLSRCIFYSGMGSNDYLNNYFMPDFYSTSTNYNDKTFAESLIKNYTQQLTRLYQFGARKVIVTGVGQIGCIPYQ 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.612e-25
Identity = 66/198 (33.33%), Postives = 101/198 (51.01%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNP--LLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            P    FGDS  D GNNN L T  K NY PYG D+    PTGRF NG+   D  A+  GF    P +        N  IG N+AS   G  + TS  +   ISL QQ+       +  + +  +    S ++  +Y +  GS D+L NY+++P  L  +++ P+QY+  L++++  ++  +Y LGAR   +  +  +GC
Sbjct:   32 PCYFVFGDSVFDNGNNNALNTKAKVNYLPYGIDYF-QGPTGRFSNGRNIPDVIAELAGFNNPIPPFAGASQAQAN--IGLNYASGAGGIREETSENMGERISLRQQV------NNHFSAIITAAVPLSRLRQCLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLISLYRIYLTQLYVLGARNVALFGIGKIGC 220          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25
Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKN------LLIGANFASAGSG-YDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +P +  FGDS VD GNNNYL  ++ KANYP  G DF N +PTGRFCNGK A D  A+  G     P YLS +   K        + G NFAS G+G ++     L  AI L++Q+  +     ++ K+  S     + K +++ V  GS D L +Y+ +  L +   P+QY+ ++ +     +K ++  GAR+F +  +  +GC
Sbjct:   37 IPGLYVFGDSLVDAGNNNYLPISISKANYPHNGVDFPNKKPTGRFCNGKNAADAIAEKFGL-PLPPPYLSLRGLLKREKRKSAAVTGVNFASGGAGIFNSSDQKLGQAIPLSKQVNNWLSIHEEVMKLEPSAAQLHLSK-SLFTVVIGSND-LFDYFGSFKLRRQSNPQQYTQLMADKLKEQLKRIHDSGARRFLIIGVAQIGC 237          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL81_ARATH1.558e-2836.68GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
GDL36_ARATH3.470e-2837.69GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL29_ARATH3.470e-2838.31GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]
GDL38_ARATH1.010e-2735.75GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL37_ARATH5.011e-2737.50GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]
GLIP5_ARATH6.545e-2736.87GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GDL28_ARATH8.547e-2733.33GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL17_ARATH2.487e-2635.12GDSL esterase/lipase At1g33811 OS=Arabidopsis thal... [more]
GDL68_ARATH1.612e-2533.33GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GDL87_ARATH3.591e-2535.29GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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