FC921241

Overview
NameFC921241
Unique NameFC921241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24
Identity = 68/213 (31.92%), Postives = 111/213 (52.11%), Query Frame = 2
Query:   80 AQDAAPLVPAIITFGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLL--NKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQKL 706
            AQ A+        FGDS  +VGNNN+L  +L +A++P YG DF   + TGRF NG+   D  +  LG  +  P YLS        L G N+AS G+G  + T  Y    ++   Q+  +++ +  +    G   +   + DA+Y +G GS D++ N ++ P +   + YT +++  +L +   + +  +Y LGARK     L PLGC+  Q++
Sbjct:   18 AQPASTSSLVTYIFGDSLTEVGNNNFLQYSLARADFPYYGVDFSGGKATGRFTNGRTIGDIISTKLGILS-PPPYLSLSQNDDAFLSGINYASGGAGILNETGIYFIQRLTFNDQINCFKKTKEVIRAKIGDGAANKHVNDAMYFIGLGSNDYVNN-FLQPFMADGQQYTHDEFVELLTSTLHNQLTTIYKLGARKVIFHGLGPLGCIPSQRV 228          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 72/200 (36.00%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  119 FGDSAVDVGNNNYLA-TLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLL-IGANFASAGSGYDDRT-SYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNK--VYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLQQQK 703
            FGDS  DVGNN  L  +L  AN P YG DF N  P GRF NG+  +D   D +G      A+L P      +L  G N+AS G G  + T  Y     SL +Q++ ++  Q  +    G K++    +DA Y+V  GS DF+ NY + P+ +    Y  + +   L+    S +K ++ LGARK  V  L P+GC+  Q+
Sbjct:   27 FGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPR-PVAFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINNYLM-PVYSDSWKYNDQTFVDYLMETLESQLKVLHSLGARKLMVFGLGPMGCIPLQR 224          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL32_ARATH (GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24
Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKN-LLIGANFASAGSGYDDRTS-YLNHAISLTQQLQYYRE-YQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            PA    GDS VD GNNN+L T+ K+N+PPYG DF   + TGRF NGK   D+ A   G     PAYL      KN +  G N+ASAG G   +T   +   +SL+ Q+  ++E   + L K     +    + ++++++  G  D+        L N+     ++++ L++ +   I+ ++ LGARKF + ++ PLGC
Sbjct:   42 PAFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKATGRFSNGKTIADYIAIYYGL-PLVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQIGTCLSLSVQVDMFQETITNNLKKNFKKSELREHLAESLFMIAIGVNDY------TFLFNETTDANEFANKLLHDYLLQIERLHKLGARKFFINNIKPLGC 232          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23
Identity = 71/202 (35.15%), Postives = 107/202 (52.97%), Query Frame = 2
Query:  101 VPAIITFGDSAVDVGNNNYLAT-LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQAT----GKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            VPAI TFGDS  D GNN+Y      +A++PPYG  F  H+PTGRF NG+   DF ++ +G     P +L  Q        N   G NFASAGSG    T+       +  QLQ ++        V  +    SII+++++++ +GS D   NY++ P      +P+ Y + +++  +  I  +Y LGAR+    SL P+GC+
Sbjct:   29 VPAIFTFGDSIFDAGNNHYNKNCTAQADFPPYGSSFF-HRPTGRFTNGRTVADFISEFVGLPLQKP-FLELQIQILNGTSNFSNGINFASAGSGLLLDTNKFMGVTPIQTQLQQFQ------TLVEQNLIEKSIIQESLFLLETGSNDIF-NYFL-PFRAPTLSPDAYVNAMLDQVNKTIDQIYKLGARRIAFFSLGPVGCV 220          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22
Identity = 68/197 (34.52%), Postives = 100/197 (50.76%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATL--FKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLL-IGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            A+  FGDS  D GNNNY+ TL  F++NY PYG+      PTGR  +G+   DF A+   +    PAYL P + GKN    G +FASAG+G    T +    I+L  QL  +++ +  L    G  Q   +I  A+Y+   G  D+   +  N  + +    E Y   +V   ++ IK +Y +G RKFG  ++    C
Sbjct:   39 ALFVFGDSVFDAGNNNYIDTLPSFRSNYWPYGQTTFKF-PTGRVSDGRTIPDFIAE-YAWLPLIPAYLQP-SNGKNQFPYGVSFASAGAGALVGT-FPGMVINLKSQLNNFKKVEKLLRSTLGEAQGKMVISRAVYLFHIGVNDYQYPFSTNSSIFQSSPQEIYVDFVVGNTTAVIKEVYKIGGRKFGFLNMGAYDC 231          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21
Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATL--FKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRT---SYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            A+  FGDS  + GNNNY  ++  F++N+ PYG+      PTGR  +G++  DF A+   +    P  L P  +   L  G NFA+  +G    T   S  N +  L  QL  ++  +  L    G  ++  +I  A+Y+   G+ D+   ++ N       T E++   ++   ++ I+ +Y LGARKFG  SL P GC
Sbjct:   37 ALFAFGDSLFEAGNNNYFDSISSFRSNFWPYGKTTFKF-PTGRVSDGRIMIDFIAE-YAWLPLIPPNLQPGYSNSQLTYGLNFATTAAGVFAGTFPGSVTNLSKDLGTQLNNFKNVEKTLRSNLGDAEARRVISKAVYLFHIGANDYQYPFFANTSTFSNTTKERFIDFVIGNTTTVIEELYKLGARKFGFLSLGPFGC 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21
Identity = 64/196 (32.65%), Postives = 94/196 (47.96%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLATL--FKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            A+  FGDS  D GNNNY+ TL   ++NY PYG+      PTGR  +G+L  DF A+   +    P  L P         G NFAS G+G    T +    I+L  QL  +++ +  L    G  +   +I  A+Y+   G  D+   +  N  L +  + E+Y   +V   +   K +Y LG RKFG+ +  P  C
Sbjct:   37 ALFVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQTTFK-SPTGRVSDGRLIPDFIAE-YAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGALVGT-FSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDC 229          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL33_ARATH (GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21
Identity = 67/200 (33.50%), Postives = 102/200 (51.00%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFK-TYAPAYLSPQATGKNLL-IGANFASAGSGYDDRTSYL-NHAISLTQQLQYYREYQSKLAKV--AGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            PA    GDS VD GNNN+L T+ +ANYPPYG DF   + TGRF NGK   D+ A  + +K    PAYL      K+ +  G N+ASAG G    T  +    +SL++Q+  + E   K  K       +    +  ++++   G  D+   Y       ++     ++  L++ F   I+ ++ LGARKF + ++ PLGC
Sbjct:   42 PAFYVIGDSLVDPGNNNHLPTMIRANYPPYGSDFEGGKATGRFSNGKTIADYIA--IYYKLPLVPAYLGLSDDRKDTISTGMNYASAGCGIRRLTGKIAGKCLSLSKQVDLFEETIEKHLKTNFKTPYELREHLAHSLFMTVIGVNDYAFFY------TRLTDANDFADELLHKFLKKIEKLHKLGARKFFINNIKPLGC 233          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 71/209 (33.97%), Postives = 101/209 (48.33%), Query Frame = 2
Query:  104 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHA----ISLTQQ-LQYYREY-QSKLAKVAGSKQSASI-----IKDAIYIVGSGSGDFLQNYYVNPLLNKVYT--PEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 691
            PAI  FGDS  D G    L+  F    PP+G  F    P GR+C+G+L  DF A++LG   Y  A+L   + G N   GANFA+AGS      S L  +     SL  Q +Q+Y  + +S+  +  G      +        A+Y    G  D    Y+ N  + +V T  PE     +++ F + IKN+YG G R F + +  P+GCL
Sbjct:   29 PAIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFG-SPAGRYCDGRLVIDFIAESLGLP-YLSAFLD--SVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPE-----IISQFMNAIKNIYGQGGRYFWIHNTGPIGCL 225          
BLAST of FC921241 vs. ExPASy Swiss-Prot
Match: GDL7_ARATH (GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 66/203 (32.51%), Postives = 103/203 (50.74%), Query Frame = 2
Query:  107 AIITFGDSAVDVGNNNYLAT---LFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQAT---GKNLLIGANFASAGSGYDDRTSYLNHA-ISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGS-GSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGC 688
            +II+FGDS  D GN   L+    L    +PPYG +F +H PTGRF NG+L  DF A+ LG     P Y S  A    G N  +G   A   S  +DR  +  +  +SL  QL  ++E    L  + GS      +I++A+ ++G  G  D+   ++V+  + ++   ++   +++   SS I  + G+G R F V    P+GC
Sbjct:   37 SIISFGDSIADTGNLLGLSDPKDLPHMAFPPYGENFFHH-PTGRFSNGRLIIDFIAEFLGLPLVPPFYGSHNANFEKGVNFAVGGATALERSFLEDRGIHFPYTNVSLGVQLNSFKE---SLPSICGSPSDCRDMIENALILMGEIGGNDYNYAFFVDKGIEEI---KELMPLVITTISSAITELIGMGGRTFLVPGEFPVGC 232          
The following BLAST results are available for this feature:
BLAST of FC921241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL80_ARATH1.782e-2431.92GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL31_ARATH6.773e-2436.00GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL32_ARATH8.845e-2433.84GDSL esterase/lipase At2g03980 OS=Arabidopsis thal... [more]
GLIP6_ARATH9.780e-2335.15GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GLIP2_ARATH8.279e-2234.52GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GRIP4_ARATH1.081e-2131.16GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GLIP1_ARATH1.412e-2132.65GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
GDL33_ARATH7.008e-2133.50GDSL esterase/lipase At2g04020 OS=Arabidopsis thal... [more]
FUCO3_ARATH1.461e-1833.97Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GDL7_ARATH2.110e-1732.51GDSL esterase/lipase At1g28580 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32102G07EF RVDevelopN Citrus clementina cDNA clone C32102G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921241 ID=FC921241; Name=FC921241; organism=Citrus clementina; type=EST; length=708bp
GAAAGTGGATATGTGTTGCGGGAAAACAGTTCTGTTTGTGGTGCTTGCAT
TTGCACTTGCACTTGCAAGCAAAGGGTATGCACAAGATGCAGCACCACTT
GTTCCTGCAATCATAACATTTGGTGATTCTGCTGTAGATGTTGGAAACAA
CAACTATCTTGCCACCCTTTTCAAGGCTAATTACCCTCCTTATGGAAGGG
ACTTTATCAATCATCAACCTACTGGAAGATTTTGCAATGGGAAATTAGCC
ACTGACTTCACTGCTGATACCCTAGGCTTTAAGACTTATGCGCCAGCATA
TCTCAGCCCACAGGCTACAGGGAAAAACCTCCTTATTGGAGCCAACTTTG
CTTCAGCGGGATCTGGTTATGATGACAGGACATCCTACTTAAATCATGCA
ATTTCATTGACTCAGCAGTTGCAGTACTATAGAGAGTACCAGAGTAAGCT
AGCAAAGGTAGCCGGTAGCAAACAATCAGCTTCCATAATCAAGGATGCGA
TATACATAGTGGGTTCTGGGAGTGGTGACTTTCTTCAGAATTACTATGTC
AATCCTTTACTTAACAAAGTCTACACTCCTGAGCAGTATAGCTCAATGCT
TGTCAATATTTTCTCAAGTTTTATTAAGAACATGTATGGATTGGGGGCAA
GAAAATTTGGAGTGACTTCACTGCCACCATTGGGTTGCCTTCAGCAGCAG
AAACTTAT
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